RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ZDHHC11BP0C7U3 371 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 UBTFL6P0CB48 400 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CSNK2A2P19784 350 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CEACAM3P40198 252 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 NBL1P41271 181 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 LHX2P50458 406 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CCR6P51684 374 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CRISP3P54108 245 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CKAP4Q07065 602 aaKnown RBP3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 IFT88Q13099 833 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 NCF4Q15080 339 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 GABRA6Q16445 453 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 POU2AF1Q16633 256 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 TPTE2P1Q5T6R2 138 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 DNAJC24Q6P3W2 148 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 MRPL55Q7Z7F7 128 aaKnown RBP3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZNF547Q8IVP9 402 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 MYOCDQ8IZQ8 938 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 STPG2Q8N412 459 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 SNX31Q8N9S9 440 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 LINC01555Q8NAE3 123 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR51G1Q8NGK1 321 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR4S2Q8NH73 311 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 BLOC1S5Q8TDH9 187 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 APH1BQ8WW43 257 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 PIH1D2Q8WWB5 315 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 TMEM230Q96A57 120 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 DYNLL2Q96FJ2 89 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 FOXC2Q99958 501 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 IL22Q9GZX6 179 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR2AG1Q9H205 316 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 ASB8Q9H765 288 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 DMAP1Q9NPF5 467 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 DYRK4Q9NR20 520 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CD84Q9UIB8 345 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 CELA1Q9UNI1 258 aa3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 YARS2Q9Y2Z4 477 aaKnown RBP3.24□□□□□ -1.89
HMGB3P31-201ENST00000413333 LOC100653049A0A140TA62 436 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 PLAC8L1A1L4L8 177 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 FAM166BA8MTA8 275 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 K7EMT4 169 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 TRDMT1O14717 391 aaKnown RBP3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 SS18L1O75177 396 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 HSBP1O75506 76 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 KRT34O76011 436 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 OTCP00480 354 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 NR2C1P13056 603 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 RAB3BP20337 219 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 GPR1P46091 355 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 PSMD4P55036 377 aaKnown RBP3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZNF33AQ06730 810 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 RSPO1Q2MKA7 263 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 HES5Q5TA89 166 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 UBE2UQ5VVX9 321 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 LINC00523Q86TU6 105 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 RNF175Q8N4F7 328 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 ARIH2OSQ8N7S6 290 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR5T3Q8NGG3 340 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 OR51E1Q8TCB6 317 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 LKAAEAR1Q8TD35 194 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 CREB3L1Q96BA8 519 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 C9orf72Q96LT7 481 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 CSPG4P5Q96PW8 444 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 FBXO44Q9H4M3 255 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 MYOZ2Q9NPC6 264 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 UVRAGQ9P2Y5 699 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 TRMT112Q9UI30 125 aaKnown RBP3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 WDR62O43379 1518 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 TNIKQ9UKE5 1360 aa3.23□□□□□ -1.89
HMGB3P31-201ENST00000413333 KIF27Q86VH2 1401 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 NKX2-6A6NCS4 301 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 NCBP2LA6PVI3 153 aaKnown RBP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 GABRR3A8MPY1 467 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 PANO1I0J062 215 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZNF701M0R085 212 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 PES1O00541 588 aaKnown RBP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZBTB5O15062 677 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 GABARAPO95166 117 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 PCCAP05165 728 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 PRPS2P11908 318 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 U2AF2P26368 475 aaKnown RBP eCLIP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 HOXA9P31269 272 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 UBE2AP49459 152 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 SERPINB8P50452 374 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 CLDN18P56856 261 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 CARD18P57730 90 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 VSX2P58304 361 aaPredicted RBP3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 SEMG2Q02383 582 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 RCAN2Q14206 197 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 ZNF266Q14584 549 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 GINS1Q14691 196 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 THEM4Q5T1C6 240 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 ADNP2Q6IQ32 1131 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 LYPD2Q6UXB3 125 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 MBOAT2Q6ZWT7 520 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 FAM122BQ7Z309 247 aa3.22□□□□□ -1.89
HMGB3P31-201ENST00000413333 APRG1Q8IVJ8 170 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms