RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 SEC16AO15027 2179 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 A6NIZ1 184 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 MTRF1O75570 445 aaKnown RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 UPK3AO75631 287 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 POU2F2P09086 479 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RAP1BP61224 184 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RPL27P61353 136 aaKnown RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RAP1AP62834 184 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 LINC01590Q5TEZ4 76 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 EEF1A1P5Q5VTE0 462 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF585AQ6P3V2 769 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 PGAP1Q75T13 922 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 LRRTM1Q86UE6 522 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 OR4K17Q8NGC6 315 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 OR2AJ1Q8NGZ0 328 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 CST11Q9H112 138 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 PCOLCE2Q9UKZ9 415 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 KLHDC2Q9Y2U9 406 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF175Q9Y473 711 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 CACNA1IQ9P0X4 2223 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 TMEM272A0A1B0GTI8 110 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 MBTPS2O43462 519 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 SYT7O43581 403 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 HCRTR1O43613 425 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 MT-ATP6P00846 226 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 IGKV1D-16P01601 117 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF806P0C7X5 589 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 HSD11B1P28845 292 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RGS19P49795 217 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 EFNB2P52799 333 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 BTG2P78543 158 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 FAM53BQ14153 422 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 TOMM20Q15388 145 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 OR2W3Q7Z3T1 314 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 GALNTL5Q7Z4T8 443 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 LYG2Q86SG7 212 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 BPIFCQ8NFQ6 507 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 OR4D10Q8NGI6 311 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 GPX8Q8TED1 209 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 SLC46A1Q96NT5 459 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 PDE7BQ9NP56 450 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RASL12Q9NYN1 266 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 GSKIPQ9P0R6 139 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 NDRG3Q9UGV2 375 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 PGAM2P15259 253 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 BDKRB2P30411 391 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 ACKR1Q16570 336 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 AWAT2Q6E213 333 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 RHOUQ7L0Q8 258 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 SLC36A1Q7Z2H8 476 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 FAM122BQ7Z309 247 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 OR1S1Q8NH92 325 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 DAZLQ92904 295 aaKnown RBP8.52□□□□□ -1.04
TRERF1-201ENST00000340840 KTI12Q96EK9 354 aaPredicted RBP8.52□□□□□ -1.04
TRERF1-201ENST00000340840 CHST6Q9GZX3 395 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF629Q9UEG4 869 aaPredicted RBP8.52□□□□□ -1.04
TRERF1-201ENST00000340840 FBXO4Q9UKT5 387 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 B9D1Q9UPM9 204 aa8.52□□□□□ -1.04
TRERF1-201ENST00000340840 TCF20Q9UGU0 1960 aaKnown RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 PRSS37A4D1T9 235 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 FARS2O95363 451 aaKnown RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 SEMA4FO95754 770 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 NR0B1P51843 470 aaKnown RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 RAB5BP61020 215 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 RPS15P62841 145 aaKnown RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 DLX2Q07687 328 aaPredicted RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 MGAT2Q10469 447 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 TMEM196Q5HYL7 178 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 PNLDC1Q8NA58 520 aaKnown RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 RNF128Q8TEB7 428 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 TSPAN32Q96QS1 320 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 URM1Q9BTM9 101 aaKnown RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 TRBV5-7A0A0A0MS05 114 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ARPC4-TTLL3A0A0A6YYG9 625 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 LOC107986453A0A1B0GWG9 222 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 C2CD4DB7Z1M9 353 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 HCKP08631 526 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ITGA5P08648 1049 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ETFDHQ16134 617 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 GAB4Q2WGN9 574 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 NKAIN2Q5VXU1 208 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 H3F3CQ6NXT2 135 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ATG4DQ86TL0 474 aaPredicted RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 FOXRED2Q8IWF2 684 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ZSCAN1Q8NBB4 408 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 CLEC1AQ8NC01 280 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 OR51A4Q8NGJ6 313 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ZNRF4Q8WWF5 429 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 GFI1Q99684 422 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 C8orf33Q9H7E9 229 aaPredicted RBP8.52□□□□□ -1.05
TRERF1-201ENST00000340840 SEC61A2Q9H9S3 476 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 OR52A1Q9UKL2 312 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 ARID1AO14497 2285 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 MUC6Q6W4X9 2439 aa8.52□□□□□ -1.05
TRERF1-201ENST00000340840 MDC1Q14676 2089 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms