RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ATF1P18846 271 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 ELK1P19419 428 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 CSRP1P21291 193 aaKnown RBP7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 APEX1P27695 318 aaKnown RBP7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 RBMS1P29558 406 aaKnown RBP7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 RFC3P40938 356 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 KIR3DL2P43630 455 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 RAP1BP61224 184 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 RAP1AP62834 184 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 MFGE8Q08431 387 aaPredicted RBP7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 SRSF6Q13247 344 aaKnown RBP7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 SLC17A1Q14916 467 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 ZNF181Q2M3W8 571 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 WDR38Q5JTN6 314 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 HBMQ6B0K9 141 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 OR7E24Q6IFN5 339 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 SLC18B1Q6NT16 456 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 FAM131AQ6UXB0 335 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 POC5Q8NA72 575 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 ADAMTS14Q8WXS8 1223 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 SOSTQ9BQB4 213 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 PLA2G3Q9NZ20 509 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 LRFN1Q9P244 771 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 DKKL1Q9UK85 242 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 FBXL3Q9UKT7 428 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 SLC22A13Q9Y226 551 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 TRAPPC4Q9Y296 219 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 TMEM14AQ9Y6G1 99 aa7.87□□□□□ -1.15
CDC42SE1-204ENST00000483763 TNFSF11O14788 317 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 DOK2O60496 412 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SRMP19623 302 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 MYL9P24844 172 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 CDAP32320 146 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SOX2P48431 317 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 EVX1P49640 407 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 STARP49675 285 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 CLDN15P56746 228 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ROM1Q03395 351 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 EIF2B1Q14232 305 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 PCK2Q16822 640 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 YIF1BQ5BJH7 314 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 LRFN4Q6PJG9 635 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 FAM220AQ7Z4H9 259 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 DCXRQ7Z4W1 244 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ZNF679Q8IYX0 411 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 OR5H6Q8NGV6 325 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 OR5AK2Q8NH90 309 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ST7LQ8TDW4 575 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SLC25A44Q96H78 314 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ZNF385AQ96PM9 386 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 DERL3Q96Q80 235 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 UQCC2Q9BRT2 126 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SRXN1Q9BYN0 137 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SLC25A18Q9H1K4 315 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 PPP1R3EQ9H7J1 279 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SACM1LQ9NTJ5 587 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 CHD6Q8TD26 2715 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 CACNA1BQ00975 2339 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 TRAV1-2A0A0B4J238 106 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 A6NJY4 79 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 GPRIN2O60269 458 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SERPINA3P01011 423 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 EIF4EP06730 217 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 CSF3P09919 207 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 EPXP11678 715 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 IL7P13232 177 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ZNF43P17038 809 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 RAB3BP20337 219 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ITGA3P26006 1051 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 NTF4P34130 210 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SUCLG1P53597 346 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 RAC1P63000 192 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 SLC35A1P78382 337 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 MRPL28Q13084 256 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ZNF239Q16600 458 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 TEX30Q5JUR7 227 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 C16orf54Q6UWD8 224 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 LINC00696Q6ZRV3 163 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 GDPD3Q7L5L3 318 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 TPRA1Q86W33 373 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 DTX1Q86Y01 620 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 OR8H2Q8N162 312 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ADPRHL1Q8NDY3 354 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 C11orf40Q8WZ69 217 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 ZNF775Q96BV0 537 aaPredicted RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 MRPL48Q96GC5 212 aaKnown RBP7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 C4orf45Q96LM5 186 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 OXGR1Q96P68 337 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 MNTQ99583 582 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 WASF3Q9UPY6 502 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 LRP12Q9Y561 859 aa7.86□□□□□ -1.15
CDC42SE1-204ENST00000483763 TRAV8-7A0A075B6U6 113 aa7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 ISPDA4D126 451 aa7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 TMCC2O75069 709 aa7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 TRAPPC6AO75865 159 aa7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 GATBO75879 557 aaKnown RBP7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 PMS2P2O95744 297 aa7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 WDPCPO95876 746 aa7.85□□□□□ -1.15
CDC42SE1-204ENST00000483763 ADRA2CP18825 462 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms