RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 COA3Q9Y2R0 106 aaPredicted RBP14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 COMMD3-BMI1R4GMX3 469 aa14.1□□□□□ -0.15
PRPF40A-212ENST00000545856 IGHA1P01876 353 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 CST2P09228 141 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 OR8G3PP0DMU2 310 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 PYCR1P32322 319 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 MRPL49Q13405 166 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ANKRD16Q6P6B7 361 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 P2RY8Q86VZ1 359 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 NANOS1Q8WY41 292 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 TSSK2Q96PF2 358 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 COPS4Q9BT78 406 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 KCNN2Q9H2S1 579 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ADGRL4Q9HBW9 690 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ATPIF1Q9UII2 106 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 FBXL3Q9UKT7 428 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 EXOSC1Q9Y3B2 195 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 C12orf71A8MTZ7 269 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 A8MXE2 369 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 J3QRE1 110 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 C1QL1O75973 258 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 RAB36O95755 333 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 HLA-DQA2P01906 255 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 GYPBP06028 91 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 CLUP10909 449 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 PSMB1P20618 241 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ASCL1P50553 236 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 FAPQ12884 760 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 AQP6Q13520 282 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 SMN1Q16637 294 aaKnown RBP14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 PHYHD1Q5SRE7 291 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 C3P1Q6ZMU1 363 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 PRSS48Q7RTY5 328 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 STX19Q8N4C7 294 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ACBD7Q8N6N7 88 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ASB17Q8WXJ9 295 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 NSMAFQ92636 917 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 NABP1Q96AH0 204 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 LGALS12Q96DT0 336 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 TMEM80Q96HE8 168 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 SIGLEC11Q96RL6 698 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 RERGLQ9H628 205 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 WDR76Q9H967 626 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 SH3BGRL2Q9UJC5 107 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 ERRFI1Q9UJM3 462 aaPredicted RBP14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 PCDHGB5Q9Y5G0 923 aa14.09□□□□□ -0.15
PRPF40A-212ENST00000545856 CACNA1CQ13936 2221 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 UBR5O95071 2799 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 SPTBN1Q01082 2364 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 IGKV1D-43A0A0B4J1Z2 117 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 A0A1W2PPL8 197 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 RGS10O43665 173 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 CDK1P06493 297 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 MYL12AP19105 171 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 NUDT6P53370 316 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ACTA2P62736 377 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ACTG2P63267 376 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ADAM8P78325 824 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 MVKQ03426 396 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 SCRN3Q0VDG4 424 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ST3GAL4Q11206 333 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 MRPL28Q13084 256 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 KCTD18Q6PI47 426 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 DEGS2Q6QHC5 323 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF813Q6ZN06 617 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 SLC22A24Q8N4F4 322 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF808Q8N4W9 903 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 OR51G2Q8NGK0 314 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 OR1K1Q8NGR3 316 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 OTOSQ8NHW6 89 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 GGHQ92820 318 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ZMYND19Q96E35 227 aaPredicted RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 CDCA4Q9BXL8 241 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 SEC61A2Q9H9S3 476 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 MRPL22Q9NWU5 206 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 CHCHD3Q9NX63 227 aaKnown RBP14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 GALNT8Q9NY28 637 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 CYB5R1Q9UHQ9 305 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 PRSS50Q9UI38 385 aa14.08□□□□□ -0.16
PRPF40A-212ENST00000545856 ANKHD1Q8IWZ3 2542 aaKnown RBP14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 DOPEY1Q5JWR5 2465 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 FLNCQ14315 2725 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 ARPC4-TTLL3A0A0A6YYG9 625 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 MAGEA13PA6NCF6 341 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 ZNF670-ZNF695F2Z2N8 137 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 XPNPEP2O43895 674 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 SMNDC1O75940 238 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 UBL3O95164 117 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 TFP02787 698 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 ITGA5P08648 1049 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 PPP3CBP16298 524 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 BMP5P22003 454 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 HOXC12P31275 282 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 PEX19P40855 299 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 TUBA4AP68366 448 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 ETFDHQ16134 617 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 SLC36A2Q495M3 483 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 SFRP5Q5T4F7 317 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 SLC18B1Q6NT16 456 aa14.07□□□□□ -0.16
PRPF40A-212ENST00000545856 XKRXQ6PP77 449 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms