RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 WNT9BO14905 357 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 ICMTO60725 284 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 IGHV3-13P01766 116 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 FAM157BP0CG42 384 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 COX4I1P13073 169 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 IFI30P13284 250 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 ZNF32P17041 273 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 APEX1P27695 318 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 LSP1P33241 339 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 WNT5AP41221 380 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 MAGEB1P43366 347 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 DVL1P1P54792 670 aaPredicted RBP8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 PSG4Q00888 419 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 LIPEQ05469 1076 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 FMODQ06828 376 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 SCGB2A2Q13296 93 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 ANKDD1AQ495B1 522 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 PABPC1L2AQ5JQF8 200 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 THEM4Q5T1C6 240 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 FAM27BQ5VT28 67 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 HACD2Q6Y1H2 254 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 ARPINQ7Z6K5 226 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 TREML1Q86YW5 311 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 NRMQ8IXM6 262 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 CLDND2Q8NHS1 167 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 SYNPRQ8TBG9 265 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 FNDC8Q8TC99 324 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 LZICQ8WZA0 190 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 SNX18Q96RF0 628 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 HOPXQ9BPY8 73 aaPredicted RBP8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 RBM4Q9BWF3 364 aaKnown RBP8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 CDH20Q9HBT6 801 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 PCDHB10Q9UN67 800 aa8.58□□□□□ -1.04
CLSTN3-203ENST00000534830 GMNCA6NCL1 334 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 CXCR6O00574 342 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 CDC42EP2O14613 210 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 SCG5P05408 212 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 CST2P09228 141 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 NR2C1P13056 603 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 ZNF26P17031 533 aaPredicted RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 PCMT1P22061 227 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 STOMP27105 288 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 APLNRP35414 380 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 MDH1P40925 334 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 GPR6P46095 362 aaPredicted RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 YAP1P46937 504 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 SLC9A3P48764 834 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 KLF3P57682 345 aaPredicted RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 CTXN1P60606 82 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 LMO4P61968 165 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 PLP2Q04941 152 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 TRAM2Q15035 370 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 ALKBH6Q3KRA9 238 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 FAM205BPQ63HN1 556 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 SHQ1Q6PI26 577 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 TBPL2Q6SJ96 375 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 SHISA2Q6UWI4 295 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 MBOAT2Q6ZWT7 520 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 FAM122BQ7Z309 247 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 ZNF101Q8IZC7 436 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 CLDN22Q8N7P3 220 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 GEMIN6Q8WXD5 167 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 ACOT11Q8WXI4 607 aaPredicted RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 C11orf40Q8WZ69 217 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 NSMAFQ92636 917 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 MARS2Q96GW9 593 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 FNDC11Q9BVV2 318 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 ZNF416Q9BWM5 594 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 WNT5BQ9H1J7 359 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 MYLK2Q9H1R3 596 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 LRMDAQ9H2I8 198 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 HINT3Q9NQE9 182 aaKnown RBP8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 SLCO1C1Q9NYB5 712 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 RHCGQ9UBD6 479 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 ABCD2Q9UBJ2 740 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 KLHL21Q9UJP4 597 aa8.57□□□□□ -1.04
CLSTN3-203ENST00000534830 TRAV27A0A087WT01 109 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 A0A1W2PPW3 197 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 B4DSR2 109 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 CCDC22O60826 627 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 PTP4A3O75365 173 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 TFP02787 698 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 IFNW1P05000 195 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 LCKP06239 509 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 GAAP10253 952 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 SAGP10523 405 aaPredicted RBP8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 IFNA8P32881 189 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 CRYBB2P43320 205 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 GSK3BP49841 420 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 MMP15P51511 669 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 SLC7A2P52569 658 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 SELENOVP59797 346 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 ERVK-25P63136 954 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 HSF2Q03933 536 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 CD47Q08722 323 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 TOP3AQ13472 1001 aaPredicted RBP8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 CCNIQ14094 377 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 ENDOGQ14249 297 aaKnown RBP8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 SGCAQ16586 387 aa8.56□□□□□ -1.04
CLSTN3-203ENST00000534830 PCGF3Q3KNV8 242 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms