RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 LPAL2Q16609 132 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 PHLDA2Q53GA4 152 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 SLC35D3Q5M8T2 416 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 CPEB2Q7Z5Q1 589 aaKnown RBP15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 C1orf87Q8N0U7 546 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 SLC35A4Q96G79 324 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 TMEFF2Q9UIK5 374 aaPredicted RBP15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 G3V3Y1 287 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 SMIM6P0DI80 62 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 FAM74A1Q5RGS3 127 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 HSD17B13Q7Z5P4 300 aaPredicted RBP15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 NAXDQ8IW45 347 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 CYB5R1Q9UHQ9 305 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 MCRIP1C9JLW8 97 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 KLK8O60259 260 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 OR13C7P0DN81 318 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 CD38P28907 300 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 LIM2P55344 173 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 TLE4Q04727 773 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 ZNF684Q5T5D7 378 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 MARCH3Q86UD3 253 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 OR2AK2Q8NG84 335 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 BORCS7Q96B45 105 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 MS4A6EQ96DS6 147 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 PTDSS2Q9BVG9 487 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 BANF2Q9H503 90 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 SPACA1Q9HBV2 294 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 IL20Q9NYY1 176 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 PCDHGA5Q9Y5G8 931 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 C2orf72A6NCS6 295 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 OR5H14A6NHG9 310 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 TGOLN2O43493 480 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 HRO43593 1189 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 EIF4EP06730 217 aaKnown RBP15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 ATPAF1Q5TC12 328 aaPredicted RBP15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 OR1J2Q8NGS2 313 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 APH1BQ8WW43 257 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 SDF2Q99470 211 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 FKRPQ9H9S5 495 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 TAF9BQ9HBM6 251 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 HRASLSQ9HDD0 168 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 OBP2BQ9NPH6 170 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 CHD4Q14839 1912 aa15.09■□□□□ 0.01
SH3RF1-201ENST00000284637 MEIKINA0A087WXM9 373 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 NID1P14543 1247 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 RPA2P15927 270 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 PAX6P26367 422 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 CSF2RBP32927 897 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 BAP18Q8IXM2 172 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 ZDHHC5Q9C0B5 715 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 CDK2AP1O14519 115 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 HIST1H1CP16403 213 aaKnown RBP15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 HMGA1P17096 107 aaKnown RBP15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 KITLGP21583 273 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 TESK1Q15569 626 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 PATZ1Q9HBE1 687 aaKnown RBP15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 TAS2R5Q9NYW4 299 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 TRAPPC2LQ9UL33 140 aa15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 COA3Q9Y2R0 106 aaPredicted RBP15.08■□□□□ 0.01
SH3RF1-201ENST00000284637 MRPL33O75394 65 aaKnown RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 AQP8O94778 261 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 ETHE1O95571 254 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 EPHA4P54764 986 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 COL13A1Q5TAT6 717 aaPredicted RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 OPN5Q6U736 354 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 OR5M8Q8NGP6 311 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 NUP205Q92621 2012 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 SLC39A9Q9NUM3 307 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 SLC23A2Q9UGH3 650 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 NWD2Q9ULI1 1742 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 PHOX2AO14813 284 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 GLI4P10075 376 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 CST5P28325 142 aaPredicted RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 GABREP78334 506 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 NKG7Q16617 165 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 SLC16A13Q7RTY0 426 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 CPT1CQ8TCG5 803 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 HPSE2Q8WWQ2 592 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 WBP2Q969T9 261 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 MAP3K3Q99759 626 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 CMC2Q9NRP2 79 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 UMAD1C9J7I0 102 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 F10P00742 488 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 RPL34P49207 117 aaKnown RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 ZNF362Q5T0B9 420 aaPredicted RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 RSPO2Q6UXX9 243 aaPredicted RBP15.08■□□□□ 0
SH3RF1-201ENST00000284637 LINC00052Q96N35 136 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 PDFQ9HBH1 243 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 GNG13Q9P2W3 67 aa15.08■□□□□ 0
SH3RF1-201ENST00000284637 LPLP06858 475 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 RAG2P55895 527 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 ZNF239Q16600 458 aaKnown RBP15.07■□□□□ 0
SH3RF1-201ENST00000284637 RNLSQ5VYX0 342 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 METRNLQ641Q3 311 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 NKAIN3Q8N8D7 197 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 LAMA4Q16363 1823 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 MYO7AQ13402 2215 aa15.07■□□□□ 0
SH3RF1-201ENST00000284637 CTNSO60931 367 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms