RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W SGO1Q08490 590 aa4.19□□□□□ -1.74
SRO7YPR032W YPT6Q99260 215 aa4.19□□□□□ -1.74
SRO7YPR032W SEC18P18759 758 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W PHO3P24031 467 aa4.19□□□□□ -1.74
SRO7YPR032W YCR016WP25617 290 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W EFT1P32324 842 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W TRM2P33753 639 aa4.19□□□□□ -1.74
SRO7YPR032W CLG1P35190 452 aa4.19□□□□□ -1.74
SRO7YPR032W HES1P35843 434 aa4.19□□□□□ -1.74
SRO7YPR032W APD1P38281 316 aa4.19□□□□□ -1.74
SRO7YPR032W YHR020WP38708 688 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W GOS1P38736 223 aa4.19□□□□□ -1.74
SRO7YPR032W GDH3P39708 457 aa4.19□□□□□ -1.74
SRO7YPR032W YER156CP40093 338 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W ATG32P40458 529 aa4.19□□□□□ -1.74
SRO7YPR032W DIM1P41819 318 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W TAF6P53040 516 aa4.19□□□□□ -1.74
SRO7YPR032W NMA2P53204 395 aa4.19□□□□□ -1.74
SRO7YPR032W YNL115CP53925 644 aa4.19□□□□□ -1.74
SRO7YPR032W CLU1Q03690 1277 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W YDR239CQ03780 787 aa4.19□□□□□ -1.74
SRO7YPR032W TDA9Q04545 1251 aa4.19□□□□□ -1.74
SRO7YPR032W COA4Q05809 96 aa4.19□□□□□ -1.74
SRO7YPR032W YAP7Q08182 245 aa4.19□□□□□ -1.74
SRO7YPR032W SOG2Q08817 791 aa4.19□□□□□ -1.74
SRO7YPR032W YOR289WQ12012 251 aaPredicted RBP4.19□□□□□ -1.74
SRO7YPR032W CWC2Q12046 339 aaPredicted RBP4.19□□□□□ -1.74
SRO7YPR032W LSO2Q3E772 92 aaKnown RBP4.19□□□□□ -1.74
SRO7YPR032W SEN2P16658 377 aa4.18□□□□□ -1.74
SRO7YPR032W MRM1P25270 412 aa4.18□□□□□ -1.74
SRO7YPR032W SSO1P32867 290 aa4.18□□□□□ -1.74
SRO7YPR032W TPO5P36029 618 aa4.18□□□□□ -1.74
SRO7YPR032W SIP3P38717 1229 aa4.18□□□□□ -1.74
SRO7YPR032W SNX4P47057 423 aa4.18□□□□□ -1.74
SRO7YPR032W RPC17P47076 161 aa4.18□□□□□ -1.74
SRO7YPR032W YMR187CQ03236 431 aa4.18□□□□□ -1.74
SRO7YPR032W SMP3Q04174 516 aa4.18□□□□□ -1.74
SRO7YPR032W SMC5Q08204 1093 aa4.18□□□□□ -1.74
SRO7YPR032W SAM3Q08986 587 aa4.18□□□□□ -1.74
SRO7YPR032W RCN2Q12044 265 aa4.18□□□□□ -1.74
SRO7YPR032W HMG2P12684 1045 aa4.18□□□□□ -1.74
SRO7YPR032W PFK2P16862 959 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
SRO7YPR032W BMH2P34730 273 aaKnown RBP4.18□□□□□ -1.74
SRO7YPR032W PFF1P38244 976 aa4.18□□□□□ -1.74
SRO7YPR032W DLD3P39976 496 aaKnown RBP4.18□□□□□ -1.74
SRO7YPR032W AVT6P40074 448 aa4.18□□□□□ -1.74
SRO7YPR032W IES2P40154 320 aa4.18□□□□□ -1.74
SRO7YPR032W YFH7P43591 353 aa4.18□□□□□ -1.74
SRO7YPR032W KEL2P50090 882 aa4.18□□□□□ -1.74
SRO7YPR032W RIM8P53179 542 aa4.18□□□□□ -1.74
SRO7YPR032W SEC10Q06245 871 aa4.18□□□□□ -1.74
SRO7YPR032W MCM21Q06675 368 aa4.18□□□□□ -1.74
SRO7YPR032W MPH2P0CD99 609 aa4.17□□□□□ -1.74
SRO7YPR032W ATR1P13090 542 aa4.17□□□□□ -1.74
SRO7YPR032W TEC1P18412 486 aa4.17□□□□□ -1.74
SRO7YPR032W EXO70P19658 623 aa4.17□□□□□ -1.74
SRO7YPR032W SWI4P25302 1093 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W GGA2P38817 585 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W CCT6P39079 546 aa4.17□□□□□ -1.74
SRO7YPR032W SER3P40054 469 aa4.17□□□□□ -1.74
SRO7YPR032W SER33P40510 469 aa4.17□□□□□ -1.74
SRO7YPR032W HAM1P47119 197 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W DCP2P53550 970 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W ULP1Q02724 621 aa4.17□□□□□ -1.74
SRO7YPR032W ECM11Q04110 302 aa4.17□□□□□ -1.74
SRO7YPR032W RGC1Q06108 1083 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W TFB4Q12004 338 aa4.17□□□□□ -1.74
SRO7YPR032W ALG1P16661 449 aa4.17□□□□□ -1.74
SRO7YPR032W SSA4P22202 642 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W MRPL25P23369 157 aa4.17□□□□□ -1.74
SRO7YPR032W PUF4P25339 888 aaKnown RBP RIP-Chip data4.17□□□□□ -1.74not detected
SRO7YPR032W EUG1P32474 517 aa4.17□□□□□ -1.74
SRO7YPR032W YKL063CP35725 167 aa4.17□□□□□ -1.74
SRO7YPR032W VPS21P36017 210 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W CRG1P38892 291 aaRIP-Chip data4.17□□□□□ -1.74not detected
SRO7YPR032W SWP82P43554 623 aa4.17□□□□□ -1.74
SRO7YPR032W UBA2P52488 636 aa4.17□□□□□ -1.74
SRO7YPR032W ALT1P52893 592 aa4.17□□□□□ -1.74
SRO7YPR032W YGL108CP53139 140 aa4.17□□□□□ -1.74
SRO7YPR032W DRN1P53255 507 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W ACL4Q03771 387 aa4.17□□□□□ -1.74
SRO7YPR032W FIN1Q03898 291 aa4.17□□□□□ -1.74
SRO7YPR032W EMI2Q04409 500 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W YLR031WQ07978 186 aa4.17□□□□□ -1.74
SRO7YPR032W PRP6P19735 899 aaPredicted RBP4.17□□□□□ -1.74
SRO7YPR032W YKR078WP36158 585 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W TRZ1P36159 838 aaPredicted RBP4.17□□□□□ -1.74
SRO7YPR032W YRO2P38079 344 aa4.17□□□□□ -1.74
SRO7YPR032W ERG7P38604 731 aa4.17□□□□□ -1.74
SRO7YPR032W PHB1P40961 287 aa4.17□□□□□ -1.74
SRO7YPR032W IMD3P50095 523 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W USE1P53146 245 aa4.17□□□□□ -1.74
SRO7YPR032W CNM67P53865 581 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W MDM1Q01846 1127 aa4.17□□□□□ -1.74
SRO7YPR032W MTC5Q03897 1148 aa4.17□□□□□ -1.74
SRO7YPR032W TRE1Q08919 783 aa4.17□□□□□ -1.74
SRO7YPR032W CDC53Q12018 815 aaKnown RBP4.17□□□□□ -1.74
SRO7YPR032W RUP1Q12242 671 aa4.17□□□□□ -1.74
SRO7YPR032W RKM4Q12504 494 aa4.17□□□□□ -1.74
SRO7YPR032W PEX1P24004 1043 aa4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms