RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	YLR415C	O13578	112 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	MET3	P08536	511 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	NGG1	P32494	702 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	MTC2	P34246	357 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	ELO3	P40319	345 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	FKH2	P41813	862 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	PFA3	P42836	336 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	ZIP2	P53061	704 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	SEC5	P89102	971 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	PKH1	Q03407	766 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	RSC3	Q06639	885 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	YLR001C	Q07895	862 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	FRE5	Q08908	694 aa		2.2	□□□□□ -2.06
RLM1	YPL089C	DIF1	O13577	133 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	CDC9	P04819	755 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	CAF20	P12962	161 aa	Known RBP	2.19	□□□□□ -2.06
RLM1	YPL089C	MRC1	P25588	1096 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	TMT1	P32643	299 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	PAF1	P38351	445 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	AMA1	P50082	593 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	MUP1	P50276	574 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	SDA1	P53313	767 aa	Known RBP	2.19	□□□□□ -2.06
RLM1	YPL089C	UME1	Q03010	460 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	ADY4	Q05955	493 aa		2.19	□□□□□ -2.06
RLM1	YPL089C	TOP1	P04786	769 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	SRD1	P09007	221 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	2.18	□□□□□ -2.06	not detected
RLM1	YPL089C	PER1	P25625	357 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	TYS1	P36421	394 aa	Known RBP	2.18	□□□□□ -2.06
RLM1	YPL089C	GRX7	P38068	203 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	YBR053C	P38235	358 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	SHR5	P41912	237 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	STB4	P50104	949 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	GPG1	P53130	126 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	NRG1	Q03125	231 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	HOF1	Q05080	669 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	ASM4	Q05166	528 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	YDR338C	Q05497	695 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	OMS1	Q06668	471 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	YOL057W	Q08225	711 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	ACF2	Q12168	779 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	TMA17	Q12513	150 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	RAD18	P10862	487 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	PCL2	P25693	308 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	MCD4	P36051	919 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	PPS1	P38148	807 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	NUG1	P40010	520 aa	Known RBP	2.18	□□□□□ -2.06
RLM1	YPL089C	MGS1	P40151	587 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	YIR042C	P40586	236 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	QRI1	P43123	477 aa	Known RBP	2.18	□□□□□ -2.06
RLM1	YPL089C	ALY2	P47029	1046 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	MET13	P53128	600 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	MCH5	Q08777	521 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	FAP7	Q12055	197 aa	Predicted RBP	2.18	□□□□□ -2.06
RLM1	YPL089C	NUP145	P49687	1317 aa		2.18	□□□□□ -2.06
RLM1	YPL089C	SFL1	P20134	766 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	YEL1	P34225	687 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	ENP1	P38333	483 aa	Known RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	YBR259W	P38338	688 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	SIC1	P38634	284 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	NOP2	P40991	618 aa	Known RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	CAF16	P43569	289 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	YJR120W	P47157	116 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	MTR3	P48240	250 aa	Predicted RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	MUK1	Q02866	612 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	YMR206W	Q03695	313 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	TMN2	Q04562	672 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	TGL5	Q12043	749 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	NDJ1	Q12366	352 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	LAT1	P12695	482 aa	Known RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	STO1	P34160	861 aa	Known RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	HOS4	P40480	1083 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	GPP1	P41277	250 aa	Known RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	YJL163C	P46996	555 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	BNA2	P47125	453 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	SNP1	Q00916	300 aa	Predicted RBP	2.17	□□□□□ -2.06
RLM1	YPL089C	TIM44	Q01852	431 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	HFD1	Q04458	532 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	CRR1	Q05790	422 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	ATG11	Q12527	1178 aa		2.17	□□□□□ -2.06
RLM1	YPL089C	EUG1	P32474	517 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	YHL017W	P38745	532 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	ECM1	P39715	212 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	TPM2	P40414	161 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	BAP3	P41815	604 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	DAS1	P47005	663 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	PEX8	P53248	589 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	TEX1	P53851	422 aa	Known RBP	2.16	□□□□□ -2.06
RLM1	YPL089C	MTQ2	Q03920	221 aa	Predicted RBP	2.16	□□□□□ -2.06
RLM1	YPL089C	YLR149C	Q99296	730 aa		2.16	□□□□□ -2.06
RLM1	YPL089C	YBR071W	P38243	211 aa		2.15	□□□□□ -2.06
RLM1	YPL089C	PCM1	P38628	557 aa	Known RBP	2.15	□□□□□ -2.06
RLM1	YPL089C	MIP6	P38760	659 aa	Known RBP	2.15	□□□□□ -2.06
RLM1	YPL089C	RPN10	P38886	268 aa	Known RBP	2.15	□□□□□ -2.06
RLM1	YPL089C	AIM14	P53109	570 aa		2.15	□□□□□ -2.06
RLM1	YPL089C	COG8	Q04632	607 aa		2.15	□□□□□ -2.06
RLM1	YPL089C	ATG33	Q06485	197 aa		2.15	□□□□□ -2.06
RLM1	YPL089C	IRC10	Q08118	586 aa		2.15	□□□□□ -2.06
RLM1	YPL089C	IRC13	Q08630	104 aa		2.15	□□□□□ -2.06
RLM1	YPL089C	GIN4	Q12263	1142 aa		2.15	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms