RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W PAC2P39937 518 aa2.21□□□□□ -2.06
SGF11YPL047W ZDS1P50111 915 aaKnown RBP2.21□□□□□ -2.06
SGF11YPL047W UBC9P50623 157 aaPredicted RBP2.21□□□□□ -2.06
SGF11YPL047W PAN2P53010 1115 aaPredicted RBP2.21□□□□□ -2.06
SGF11YPL047W TEX1P53851 422 aaKnown RBP2.21□□□□□ -2.06
SGF11YPL047W RIM13Q03792 727 aa2.21□□□□□ -2.06
SGF11YPL047W CTK1Q03957 528 aaKnown RBP2.21□□□□□ -2.06
SGF11YPL047W SEG1Q04279 960 aa2.21□□□□□ -2.06
SGF11YPL047W YDR514CQ04408 483 aa2.21□□□□□ -2.06
SGF11YPL047W SLK19Q08581 821 aaKnown RBP2.21□□□□□ -2.06
SGF11YPL047W OSH2Q12451 1283 aa2.21□□□□□ -2.06
SGF11YPL047W SIR3P06701 978 aa2.2□□□□□ -2.06
SGF11YPL047W RPL8BP29453 256 aaKnown RBP2.2□□□□□ -2.06
SGF11YPL047W ECM1P39715 212 aa2.2□□□□□ -2.06
SGF11YPL047W UBP6P43593 499 aaKnown RBP2.2□□□□□ -2.06
SGF11YPL047W PRP31P49704 494 aaPredicted RBP2.2□□□□□ -2.06
SGF11YPL047W YGR283CP53336 341 aaPredicted RBP2.2□□□□□ -2.06
SGF11YPL047W ATG4P53867 494 aa2.2□□□□□ -2.06
SGF11YPL047W WRS1Q12109 432 aaKnown RBP2.2□□□□□ -2.06
SGF11YPL047W DIF1O13577 133 aa2.19□□□□□ -2.06
SGF11YPL047W GRX1P25373 110 aaKnown RBP2.19□□□□□ -2.06
SGF11YPL047W RLP7P40693 322 aaKnown RBP2.19□□□□□ -2.06
SGF11YPL047W GYP8P43570 497 aa2.19□□□□□ -2.06
SGF11YPL047W MRK1P50873 501 aa2.19□□□□□ -2.06
SGF11YPL047W SCS3P53012 380 aa2.19□□□□□ -2.06
SGF11YPL047W ZIP2P53061 704 aa2.19□□□□□ -2.06
SGF11YPL047W NAN1Q02931 896 aaKnown RBP2.19□□□□□ -2.06
SGF11YPL047W YDL124WQ07551 312 aaKnown RBP2.19□□□□□ -2.06
SGF11YPL047W GPR1Q12361 961 aa2.19□□□□□ -2.06
SGF11YPL047W YBR182C-AQ8TGU6 64 aa2.19□□□□□ -2.06
SGF11YPL047W TOM70P07213 617 aaKnown RBP2.18□□□□□ -2.06
SGF11YPL047W ERG11P10614 530 aa2.18□□□□□ -2.06
SGF11YPL047W HSP60P19882 572 aaKnown RBP2.18□□□□□ -2.06
SGF11YPL047W RPA135P22138 1203 aaKnown RBP2.18□□□□□ -2.06
SGF11YPL047W PHO11P35842 467 aa2.18□□□□□ -2.06
SGF11YPL047W TRZ1P36159 838 aaPredicted RBP2.18□□□□□ -2.06
SGF11YPL047W APT2P36973 181 aa2.18□□□□□ -2.06
SGF11YPL047W UBS1P38290 277 aa2.18□□□□□ -2.06
SGF11YPL047W PHO12P38693 467 aa2.18□□□□□ -2.06
SGF11YPL047W FMO1P38866 432 aa2.18□□□□□ -2.06
SGF11YPL047W NUP60P39705 539 aa2.18□□□□□ -2.06
SGF11YPL047W HUL4P40985 892 aa2.18□□□□□ -2.06
SGF11YPL047W NET1P47035 1189 aa2.18□□□□□ -2.06
SGF11YPL047W MTL1P53214 551 aa2.18□□□□□ -2.06
SGF11YPL047W OSW1Q08692 278 aa2.18□□□□□ -2.06
SGF11YPL047W MUP3P38734 546 aa2.17□□□□□ -2.06
SGF11YPL047W LTP1P40347 161 aa2.17□□□□□ -2.06
SGF11YPL047W BNA3P47039 444 aaKnown RBP2.17□□□□□ -2.06
SGF11YPL047W FHN1P53279 174 aa2.17□□□□□ -2.06
SGF11YPL047W PHR1P05066 565 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SGF11YPL047W KCC4P25389 1037 aa2.16□□□□□ -2.06
SGF11YPL047W FUB1P25659 250 aa2.16□□□□□ -2.06
SGF11YPL047W APL2P36000 726 aaPredicted RBP2.16□□□□□ -2.06
SGF11YPL047W GMH1P36125 273 aa2.16□□□□□ -2.06
SGF11YPL047W YHR112CP38716 378 aa2.16□□□□□ -2.06
SGF11YPL047W HRB1P38922 454 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SGF11YPL047W XBP1P40489 647 aa2.16□□□□□ -2.06
SGF11YPL047W ALG2P43636 503 aa2.16□□□□□ -2.06
SGF11YPL047W YGR125WP53273 1036 aa2.16□□□□□ -2.06
SGF11YPL047W ORC4P54791 529 aa2.16□□□□□ -2.06
SGF11YPL047W FMP30Q02883 468 aa2.16□□□□□ -2.06
SGF11YPL047W MET7Q08645 548 aa2.16□□□□□ -2.06
SGF11YPL047W MLH3Q12083 715 aa2.16□□□□□ -2.06
SGF11YPL047W RGT2Q12300 763 aa2.16□□□□□ -2.06
SGF11YPL047W CLF1Q12309 687 aaPredicted RBP2.16□□□□□ -2.06
SGF11YPL047W ZRT2Q12436 422 aa2.16□□□□□ -2.06
SGF11YPL047W YLR149CQ99296 730 aa2.16□□□□□ -2.06
SGF11YPL047W PGK1P00560 416 aaKnown RBP2.15□□□□□ -2.07
SGF11YPL047W CIT1P00890 479 aa2.15□□□□□ -2.07
SGF11YPL047W NUP1P20676 1076 aa2.15□□□□□ -2.07
SGF11YPL047W ADE2P21264 571 aaKnown RBP2.15□□□□□ -2.07
SGF11YPL047W LYS9P38999 446 aa2.15□□□□□ -2.07
SGF11YPL047W ALY2P47029 1046 aa2.15□□□□□ -2.07
SGF11YPL047W SPC98P53540 846 aa2.15□□□□□ -2.07
SGF11YPL047W MPS1P54199 764 aa2.15□□□□□ -2.07
SGF11YPL047W ARG5,6Q01217 863 aa2.15□□□□□ -2.07
SGF11YPL047W ATP25Q03153 612 aa2.15□□□□□ -2.07
SGF11YPL047W USV1Q12132 391 aa2.15□□□□□ -2.07
SGF11YPL047W SSF2Q12153 453 aaPredicted RBP2.15□□□□□ -2.07
SGF11YPL047W RAD4P14736 754 aa2.14□□□□□ -2.07
SGF11YPL047W THR1P17423 357 aaKnown RBP2.14□□□□□ -2.07
SGF11YPL047W PER1P25625 357 aa2.14□□□□□ -2.07
SGF11YPL047W YUR1P26725 428 aa2.14□□□□□ -2.07
SGF11YPL047W TAF8Q03750 510 aa2.14□□□□□ -2.07
SGF11YPL047W MCM21Q06675 368 aa2.14□□□□□ -2.07
SGF11YPL047W ADE5,7P07244 802 aaKnown RBP2.13□□□□□ -2.07
SGF11YPL047W STE12P13574 688 aa2.13□□□□□ -2.07
SGF11YPL047W ABF1P14164 731 aa2.13□□□□□ -2.07
SGF11YPL047W CRP1P38845 465 aaKnown RBP2.13□□□□□ -2.07
SGF11YPL047W YFL052WP43551 465 aa2.13□□□□□ -2.07
SGF11YPL047W STB2P46679 850 aa2.13□□□□□ -2.07
SGF11YPL047W TIM54P47045 478 aa2.13□□□□□ -2.07
SGF11YPL047W HXT16P47185 567 aa2.13□□□□□ -2.07
SGF11YPL047W REC102Q02721 264 aa2.13□□□□□ -2.07
SGF11YPL047W TAF7Q05021 590 aa2.13□□□□□ -2.07
SGF11YPL047W HRP1Q99383 534 aaKnown RBP2.13□□□□□ -2.07
SGF11YPL047W ERG6P25087 383 aaKnown RBP2.12□□□□□ -2.07
SGF11YPL047W SAT4P25333 603 aaKnown RBP2.12□□□□□ -2.07
SGF11YPL047W UGP1P32861 499 aaKnown RBP2.12□□□□□ -2.07
SGF11YPL047W SET3P36124 751 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms