RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C SIZ1Q04195 904 aa6.21□□□□□ -1.42
CLP1YOR250C ERV41Q04651 352 aa6.21□□□□□ -1.42
CLP1YOR250C DUS4Q06063 367 aa6.21□□□□□ -1.42
CLP1YOR250C YCG1Q06680 1035 aa6.21□□□□□ -1.42
CLP1YOR250C YIL177CP40434 1758 aa6.2□□□□□ -1.42
CLP1YOR250C YJL225CP40889 1758 aa6.2□□□□□ -1.42
CLP1YOR250C THS1P04801 734 aaKnown RBP6.2□□□□□ -1.42
CLP1YOR250C KAR3P17119 729 aa6.2□□□□□ -1.42
CLP1YOR250C PET123P17558 318 aa6.2□□□□□ -1.42
CLP1YOR250C EFB1P32471 206 aaKnown RBP6.2□□□□□ -1.42
CLP1YOR250C PET112P33893 541 aa6.2□□□□□ -1.42
CLP1YOR250C MCM7P38132 845 aa6.2□□□□□ -1.42
CLP1YOR250C GDT1P38301 280 aaPredicted RBP6.2□□□□□ -1.42
CLP1YOR250C GEM1P39722 662 aa6.2□□□□□ -1.42
CLP1YOR250C SEC27P41811 889 aaKnown RBP6.2□□□□□ -1.42
CLP1YOR250C SPT20P50875 604 aa6.2□□□□□ -1.42
CLP1YOR250C TPO2P53283 614 aa6.2□□□□□ -1.42
CLP1YOR250C ARP5P53946 755 aa6.2□□□□□ -1.42
CLP1YOR250C VPS30Q02948 557 aa6.2□□□□□ -1.42
CLP1YOR250C GYL1Q04322 720 aa6.2□□□□□ -1.42
CLP1YOR250C GGA1Q06336 557 aa6.2□□□□□ -1.42
CLP1YOR250C YOR389WQ08912 624 aa6.2□□□□□ -1.42
CLP1YOR250C ACM1Q08981 209 aa6.2□□□□□ -1.42
CLP1YOR250C RIB2Q12362 591 aaKnown RBP6.2□□□□□ -1.42
CLP1YOR250C GAL10P04397 699 aa6.19□□□□□ -1.42
CLP1YOR250C RPL11AP0C0W9 174 aaKnown RBP6.19□□□□□ -1.42
CLP1YOR250C SRP40P32583 406 aaPredicted RBP6.19□□□□□ -1.42
CLP1YOR250C YKT6P36015 200 aaKnown RBP6.19□□□□□ -1.42
CLP1YOR250C SEC9P40357 651 aa6.19□□□□□ -1.42
CLP1YOR250C TY4A-JP47023 414 aa6.19□□□□□ -1.42
CLP1YOR250C YGL242CP53066 181 aa6.19□□□□□ -1.42
CLP1YOR250C PBP1P53297 722 aaKnown RBP6.19□□□□□ -1.42
CLP1YOR250C DNM1P54861 757 aa6.19□□□□□ -1.42
CLP1YOR250C PLB2Q03674 706 aa6.19□□□□□ -1.42
CLP1YOR250C YDR341CQ05506 607 aaKnown RBP6.19□□□□□ -1.42
CLP1YOR250C CTI6Q08923 506 aa6.19□□□□□ -1.42
CLP1YOR250C RPL11BQ3E757 174 aaPredicted RBP6.19□□□□□ -1.42
CLP1YOR250C SWI1P09547 1314 aa6.19□□□□□ -1.42
CLP1YOR250C TRP2P00899 507 aaKnown RBP6.18□□□□□ -1.42
CLP1YOR250C CMP2P14747 604 aa6.18□□□□□ -1.42
CLP1YOR250C THR4P16120 514 aaKnown RBP6.18□□□□□ -1.42
CLP1YOR250C ACE2P21192 770 aa6.18□□□□□ -1.42
CLP1YOR250C UBC1P21734 215 aaKnown RBP6.18□□□□□ -1.42
CLP1YOR250C SRM1P21827 482 aa6.18□□□□□ -1.42
CLP1YOR250C DPB3P27344 201 aa6.18□□□□□ -1.42
CLP1YOR250C RPC82P32349 654 aa6.18□□□□□ -1.42
CLP1YOR250C NUP133P36161 1157 aa6.18□□□□□ -1.42
CLP1YOR250C UGA2P38067 497 aa6.18□□□□□ -1.42
CLP1YOR250C PCH2P38126 564 aa6.18□□□□□ -1.42
CLP1YOR250C PNT1P38969 423 aa6.18□□□□□ -1.42
CLP1YOR250C NOC2P39744 710 aaKnown RBP6.18□□□□□ -1.42
CLP1YOR250C RSC8P43609 557 aaKnown RBP6.18□□□□□ -1.42
CLP1YOR250C CTK3P46963 296 aaPredicted RBP6.18□□□□□ -1.42
CLP1YOR250C YJR008WP47085 338 aa6.18□□□□□ -1.42
CLP1YOR250C MAL13P53338 473 aa6.18□□□□□ -1.42
CLP1YOR250C VPS75P53853 264 aa6.18□□□□□ -1.42
CLP1YOR250C ROT1Q03691 256 aa6.18□□□□□ -1.42
CLP1YOR250C VMS1Q04311 632 aaKnown RBP6.18□□□□□ -1.42
CLP1YOR250C MATALPHA2P0CY08 210 aa6.17□□□□□ -1.42
CLP1YOR250C HMLALPHA2P0CY09 210 aa6.17□□□□□ -1.42
CLP1YOR250C RAD51P25454 400 aa6.17□□□□□ -1.42
CLP1YOR250C APL1P27351 700 aa6.17□□□□□ -1.42
CLP1YOR250C ZUO1P32527 433 aaKnown RBP6.17□□□□□ -1.42
CLP1YOR250C TAT2P38967 592 aa6.17□□□□□ -1.42
CLP1YOR250C UBP12P39538 1254 aa6.17□□□□□ -1.42
CLP1YOR250C MXR1P40029 184 aa6.17□□□□□ -1.42
CLP1YOR250C AIM20P40451 204 aa6.17□□□□□ -1.42
CLP1YOR250C VID28P40547 921 aa6.17□□□□□ -1.42
CLP1YOR250C APT1P49435 187 aaKnown RBP6.17□□□□□ -1.42
CLP1YOR250C YKE2P52553 114 aa6.17□□□□□ -1.42
CLP1YOR250C EEB1Q02891 456 aa6.17□□□□□ -1.42
CLP1YOR250C RBA50Q04418 439 aa6.17□□□□□ -1.42
CLP1YOR250C GSF2Q04697 403 aaKnown RBP6.17□□□□□ -1.42
CLP1YOR250C RKM4Q12504 494 aa6.17□□□□□ -1.42
CLP1YOR250C TY4B-HP0C2J7 1802 aa6.16□□□□□ -1.42
CLP1YOR250C TY4B-JP47024 1803 aa6.16□□□□□ -1.42
CLP1YOR250C FKS3Q04952 1785 aa6.16□□□□□ -1.42
CLP1YOR250C PGI1P12709 554 aaKnown RBP6.16□□□□□ -1.42
CLP1YOR250C CTS1P29029 562 aa6.16□□□□□ -1.42
CLP1YOR250C YEL043WP32618 956 aa6.16□□□□□ -1.42
CLP1YOR250C SLA2P33338 968 aa6.16□□□□□ -1.42
CLP1YOR250C MUD2P36084 527 aaKnown RBP6.16□□□□□ -1.42
CLP1YOR250C KTR3P38130 404 aaPredicted RBP6.16□□□□□ -1.42
CLP1YOR250C CCT4P39078 528 aaKnown RBP6.16□□□□□ -1.42
CLP1YOR250C CAJ1P39101 391 aa6.16□□□□□ -1.42
CLP1YOR250C TYW3P53177 273 aa6.16□□□□□ -1.42
CLP1YOR250C YNL247WP53852 767 aaKnown RBP6.16□□□□□ -1.42
CLP1YOR250C ALF1P53904 254 aa6.16□□□□□ -1.42
CLP1YOR250C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CLP1YOR250C MSC2Q03455 724 aa6.16□□□□□ -1.42
CLP1YOR250C RRB1Q04225 511 aaKnown RBP6.16□□□□□ -1.42
CLP1YOR250C SPP382Q06411 708 aaPredicted RBP6.16□□□□□ -1.42
CLP1YOR250C RXT3Q07458 294 aa6.16□□□□□ -1.42
CLP1YOR250C APL4Q12028 832 aa6.16□□□□□ -1.42
CLP1YOR250C RPO26P20435 155 aa6.15□□□□□ -1.43
CLP1YOR250C DBP2P24783 546 aaKnown RBP6.15□□□□□ -1.43
CLP1YOR250C CDC15P27636 974 aa6.15□□□□□ -1.43
CLP1YOR250C PXL1P36166 706 aa6.15□□□□□ -1.43
CLP1YOR250C PSY4P38193 441 aa6.15□□□□□ -1.43
CLP1YOR250C NDC80P40460 691 aa6.15□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms