RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W UTP8P53276 713 aaKnown RBP3.5□□□□□ -1.85
PEP12YOR036W SPO75Q07798 868 aa3.5□□□□□ -1.85
PEP12YOR036W YLR125WQ12138 136 aa3.5□□□□□ -1.85
PEP12YOR036W OSH2Q12451 1283 aa3.5□□□□□ -1.85
PEP12YOR036W CIT1P00890 479 aa3.49□□□□□ -1.85
PEP12YOR036W SIR3P06701 978 aa3.49□□□□□ -1.85
PEP12YOR036W PHO8P11491 566 aa3.49□□□□□ -1.85
PEP12YOR036W GAL11P19659 1081 aa3.49□□□□□ -1.85
PEP12YOR036W HSP60P19882 572 aaKnown RBP3.49□□□□□ -1.85
PEP12YOR036W ERP6P53198 216 aa3.49□□□□□ -1.85
PEP12YOR036W YGR125WP53273 1036 aa3.49□□□□□ -1.85
PEP12YOR036W POB3Q04636 552 aaKnown RBP3.49□□□□□ -1.85
PEP12YOR036W CAN1P04817 590 aa3.48□□□□□ -1.85
PEP12YOR036W HOM2P13663 365 aaKnown RBP3.48□□□□□ -1.85
PEP12YOR036W YCL002CP25565 263 aa3.48□□□□□ -1.85
PEP12YOR036W YAP1802P53309 568 aa3.48□□□□□ -1.85
PEP12YOR036W NOG2P53742 486 aaKnown RBP3.48□□□□□ -1.85
PEP12YOR036W TAF8Q03750 510 aa3.48□□□□□ -1.85
PEP12YOR036W LRS4Q04087 347 aaKnown RBP3.48□□□□□ -1.85
PEP12YOR036W UTP14Q04500 899 aaKnown RBP3.48□□□□□ -1.85
PEP12YOR036W OSW1Q08692 278 aa3.48□□□□□ -1.85
PEP12YOR036W ATG11Q12527 1178 aa3.48□□□□□ -1.85
PEP12YOR036W RPN13O13563 156 aa3.47□□□□□ -1.85
PEP12YOR036W MSD1P15179 658 aaKnown RBP3.47□□□□□ -1.85
PEP12YOR036W PRP9P19736 530 aaKnown RBP3.47□□□□□ -1.85
PEP12YOR036W DAL7P21826 554 aa3.47□□□□□ -1.85
PEP12YOR036W MNN1P39106 762 aa3.47□□□□□ -1.85
PEP12YOR036W BDH2P39713 417 aa3.47□□□□□ -1.85
PEP12YOR036W TEX1P53851 422 aaKnown RBP3.47□□□□□ -1.85
PEP12YOR036W EAF1Q06337 982 aa3.47□□□□□ -1.85
PEP12YOR036W PRC1P00729 532 aa3.46□□□□□ -1.86
PEP12YOR036W ERR1P0CX10 437 aa3.46□□□□□ -1.86
PEP12YOR036W ERR2P0CX11 437 aa3.46□□□□□ -1.86
PEP12YOR036W PYC1P11154 1178 aaKnown RBP3.46□□□□□ -1.86
PEP12YOR036W VPS34P22543 875 aa3.46□□□□□ -1.86
PEP12YOR036W PAC2P39937 518 aa3.46□□□□□ -1.86
PEP12YOR036W TAD1P53065 400 aa3.46□□□□□ -1.86
PEP12YOR036W YGL081WP53156 320 aa3.46□□□□□ -1.86
PEP12YOR036W SEG1Q04279 960 aa3.46□□□□□ -1.86
PEP12YOR036W RSC3Q06639 885 aa3.46□□□□□ -1.86
PEP12YOR036W TOP3P13099 656 aa3.45□□□□□ -1.86
PEP12YOR036W ARE1P25628 610 aa3.45□□□□□ -1.86
PEP12YOR036W MSH2P25847 964 aa3.45□□□□□ -1.86
PEP12YOR036W YUR1P26725 428 aa3.45□□□□□ -1.86
PEP12YOR036W THI4P32318 326 aa3.45□□□□□ -1.86
PEP12YOR036W PET10P36139 283 aa3.45□□□□□ -1.86
PEP12YOR036W GLG1P36143 616 aa3.45□□□□□ -1.86
PEP12YOR036W REV7P38927 245 aa3.45□□□□□ -1.86
PEP12YOR036W HUL4P40985 892 aa3.45□□□□□ -1.86
PEP12YOR036W ALR2P43553 858 aa3.45□□□□□ -1.86
PEP12YOR036W BNA3P47039 444 aaKnown RBP3.45□□□□□ -1.86
PEP12YOR036W YJR142WP47173 342 aa3.45□□□□□ -1.86
PEP12YOR036W PAN2P53010 1115 aaPredicted RBP3.45□□□□□ -1.86
PEP12YOR036W RTA1P53047 317 aa3.45□□□□□ -1.86
PEP12YOR036W UBX5Q06682 500 aa3.45□□□□□ -1.86
PEP12YOR036W THI21Q08975 551 aa3.45□□□□□ -1.86
PEP12YOR036W YGR161W-CQ3E744 92 aa3.45□□□□□ -1.86
PEP12YOR036W YKL033W-AQ86ZR7 236 aa3.45□□□□□ -1.86
PEP12YOR036W SCT1P32784 759 aa3.44□□□□□ -1.86
PEP12YOR036W BET3P36149 193 aa3.44□□□□□ -1.86
PEP12YOR036W YBR259WP38338 688 aa3.44□□□□□ -1.86
PEP12YOR036W CCT3P39077 534 aaKnown RBP3.44□□□□□ -1.86
PEP12YOR036W ARG2P40360 574 aa3.44□□□□□ -1.86
PEP12YOR036W CTR1P49573 406 aa3.44□□□□□ -1.86
PEP12YOR036W YDL124WQ07551 312 aaKnown RBP3.44□□□□□ -1.86
PEP12YOR036W HBN1Q96VH4 193 aa3.44□□□□□ -1.86
PEP12YOR036W CDC11P32458 415 aa3.43□□□□□ -1.86
PEP12YOR036W SFB3P38810 929 aa3.43□□□□□ -1.86
PEP12YOR036W FMO1P38866 432 aa3.43□□□□□ -1.86
PEP12YOR036W HRB1P38922 454 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
PEP12YOR036W UBC9P50623 157 aaPredicted RBP3.43□□□□□ -1.86
PEP12YOR036W MAL11P53048 616 aa3.43□□□□□ -1.86
PEP12YOR036W MTL1P53214 551 aa3.43□□□□□ -1.86
PEP12YOR036W GAD1Q04792 585 aa3.43□□□□□ -1.86
PEP12YOR036W RGC1Q06108 1083 aaKnown RBP3.43□□□□□ -1.86
PEP12YOR036W NTG2Q08214 380 aa3.43□□□□□ -1.86
PEP12YOR036W RGT2Q12300 763 aa3.43□□□□□ -1.86
PEP12YOR036W NOP14Q99207 810 aaKnown RBP3.43□□□□□ -1.86
PEP12YOR036W PHR1P05066 565 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
PEP12YOR036W GRX4P32642 244 aa3.42□□□□□ -1.86
PEP12YOR036W LYS9P38999 446 aa3.42□□□□□ -1.86
PEP12YOR036W GDH3P39708 457 aa3.42□□□□□ -1.86
PEP12YOR036W NIT3P49954 291 aa3.42□□□□□ -1.86
PEP12YOR036W FHN1P53279 174 aa3.42□□□□□ -1.86
PEP12YOR036W UGO1Q03327 502 aa3.42□□□□□ -1.86
PEP12YOR036W TSR4P25040 408 aa3.41□□□□□ -1.86
PEP12YOR036W SAP190P36123 1033 aa3.41□□□□□ -1.86
PEP12YOR036W UBP12P39538 1254 aa3.41□□□□□ -1.86
PEP12YOR036W GYP8P43570 497 aa3.41□□□□□ -1.86
PEP12YOR036W MTR3P48240 250 aaPredicted RBP3.41□□□□□ -1.86
PEP12YOR036W BPL1P48445 690 aaPredicted RBP3.41□□□□□ -1.86
PEP12YOR036W MRK1P50873 501 aa3.41□□□□□ -1.86
PEP12YOR036W ATG4P53867 494 aa3.41□□□□□ -1.86
PEP12YOR036W ERG11P10614 530 aa3.4□□□□□ -1.87
PEP12YOR036W SSB1P11484 613 aaKnown RBP3.4□□□□□ -1.87
PEP12YOR036W PTP1P25044 335 aa3.4□□□□□ -1.87
PEP12YOR036W MVD1P32377 396 aaKnown RBP3.4□□□□□ -1.87
PEP12YOR036W EMC3P36039 253 aa3.4□□□□□ -1.87
PEP12YOR036W SET5P38890 526 aaKnown RBP3.4□□□□□ -1.87
PEP12YOR036W SSB2P40150 613 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms