RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C URN1Q06525 465 aaKnown RBP3.83□□□□□ -1.8
SHE4YOR035C INO80P53115 1489 aa3.82□□□□□ -1.8
SHE4YOR035C ERG4P25340 473 aa3.82□□□□□ -1.8
SHE4YOR035C CRP1P38845 465 aaKnown RBP3.82□□□□□ -1.8
SHE4YOR035C MRPS35P53292 345 aa3.82□□□□□ -1.8
SHE4YOR035C DLT1Q04216 342 aa3.82□□□□□ -1.8
SHE4YOR035C GPR1Q12361 961 aa3.82□□□□□ -1.8
SHE4YOR035C BUL1P48524 976 aa3.82□□□□□ -1.8
SHE4YOR035C PRP31P49704 494 aaPredicted RBP3.82□□□□□ -1.8
SHE4YOR035C NUP145P49687 1317 aa3.81□□□□□ -1.8
SHE4YOR035C YBR259WP38338 688 aa3.81□□□□□ -1.8
SHE4YOR035C ELO3P40319 345 aa3.81□□□□□ -1.8
SHE4YOR035C PCL10P53124 433 aa3.81□□□□□ -1.8
SHE4YOR035C SUN4P53616 420 aa3.81□□□□□ -1.8
SHE4YOR035C TGL5Q12043 749 aa3.81□□□□□ -1.8
SHE4YOR035C TRM13Q12383 476 aa3.81□□□□□ -1.8
SHE4YOR035C CAF20P12962 161 aaKnown RBP3.81□□□□□ -1.8
SHE4YOR035C KTR4P38131 464 aa3.81□□□□□ -1.8
SHE4YOR035C SUL1P38359 859 aa3.81□□□□□ -1.8
SHE4YOR035C MGS1P40151 587 aa3.81□□□□□ -1.8
SHE4YOR035C MSE1P48525 536 aa3.81□□□□□ -1.8
SHE4YOR035C MUP1P50276 574 aa3.81□□□□□ -1.8
SHE4YOR035C KIN4Q01919 800 aa3.81□□□□□ -1.8
SHE4YOR035C GSF2Q04697 403 aaKnown RBP3.81□□□□□ -1.8
SHE4YOR035C YKR018CP36114 725 aa3.8□□□□□ -1.8
SHE4YOR035C MIP6P38760 659 aaKnown RBP3.8□□□□□ -1.8
SHE4YOR035C THI73Q07904 523 aa3.8□□□□□ -1.8
SHE4YOR035C YLR040CQ07988 224 aa3.8□□□□□ -1.8
SHE4YOR035C PUS9Q12069 462 aa3.8□□□□□ -1.8
SHE4YOR035C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.8□□□□□ -1.8not detected
SHE4YOR035C CCR4P31384 837 aaKnown RBP3.8□□□□□ -1.8
SHE4YOR035C TYS1P36421 394 aaKnown RBP3.8□□□□□ -1.8
SHE4YOR035C PMT3P47190 753 aa3.8□□□□□ -1.8
SHE4YOR035C GAD1Q04792 585 aa3.8□□□□□ -1.8
SHE4YOR035C APT2P36973 181 aa3.79□□□□□ -1.8
SHE4YOR035C YIR042CP40586 236 aa3.79□□□□□ -1.8
SHE4YOR035C YJR096WP47137 282 aa3.79□□□□□ -1.8
SHE4YOR035C YNR029CP53729 429 aaKnown RBP3.79□□□□□ -1.8
SHE4YOR035C FRE5Q08908 694 aa3.79□□□□□ -1.8
SHE4YOR035C PRP19P32523 503 aaKnown RBP3.78□□□□□ -1.8
SHE4YOR035C AMA1P50082 593 aa3.78□□□□□ -1.8
SHE4YOR035C RNT1Q02555 471 aa3.78□□□□□ -1.8
SHE4YOR035C UME1Q03010 460 aa3.78□□□□□ -1.8
SHE4YOR035C ALG7P07286 448 aa3.78□□□□□ -1.8
SHE4YOR035C ADE2P21264 571 aaKnown RBP3.78□□□□□ -1.8
SHE4YOR035C TEX1P53851 422 aaKnown RBP3.78□□□□□ -1.8
SHE4YOR035C ARP4P80428 489 aa3.78□□□□□ -1.8
SHE4YOR035C YOL073CQ08232 322 aa3.78□□□□□ -1.8
SHE4YOR035C APL2P36000 726 aaPredicted RBP3.77□□□□□ -1.81
SHE4YOR035C TDA3P38758 523 aa3.77□□□□□ -1.81
SHE4YOR035C CKB2P38930 258 aa3.77□□□□□ -1.81
SHE4YOR035C ECM1P39715 212 aa3.77□□□□□ -1.81
SHE4YOR035C MNN4P36044 1178 aa3.77□□□□□ -1.81
SHE4YOR035C APN2P38207 520 aa3.77□□□□□ -1.81
SHE4YOR035C BFA1P47113 574 aa3.77□□□□□ -1.81
SHE4YOR035C GPD1Q00055 391 aaKnown RBP3.77□□□□□ -1.81
SHE4YOR035C ARG5,6Q01217 863 aa3.77□□□□□ -1.81
SHE4YOR035C MCM21Q06675 368 aa3.77□□□□□ -1.81
SHE4YOR035C PPR1P07272 904 aaPredicted RBP3.76□□□□□ -1.81
SHE4YOR035C LAT1P12695 482 aaKnown RBP3.76□□□□□ -1.81
SHE4YOR035C YKR075CP36155 307 aa3.76□□□□□ -1.81
SHE4YOR035C YBR053CP38235 358 aa3.76□□□□□ -1.81
SHE4YOR035C YHR112CP38716 378 aa3.76□□□□□ -1.81
SHE4YOR035C YGR237CP50089 785 aa3.76□□□□□ -1.81
SHE4YOR035C YGL081WP53156 320 aa3.76□□□□□ -1.81
SHE4YOR035C COX18P53239 316 aa3.76□□□□□ -1.81
SHE4YOR035C MTQ2Q03920 221 aaPredicted RBP3.76□□□□□ -1.81
SHE4YOR035C FAP7Q12055 197 aaPredicted RBP3.76□□□□□ -1.81
SHE4YOR035C PNS1Q12412 539 aa3.76□□□□□ -1.81
SHE4YOR035C ATG11Q12527 1178 aa3.76□□□□□ -1.81
SHE4YOR035C HIS7P33734 552 aaKnown RBP3.76□□□□□ -1.81
SHE4YOR035C TRZ1P36159 838 aaPredicted RBP3.76□□□□□ -1.81
SHE4YOR035C SET2P46995 733 aaKnown RBP3.76□□□□□ -1.81
SHE4YOR035C YGR153WP48238 217 aa3.76□□□□□ -1.81
SHE4YOR035C BRE5P53741 515 aaKnown RBP3.76□□□□□ -1.81
SHE4YOR035C LEE1Q02799 301 aaKnown RBP3.76□□□□□ -1.81
SHE4YOR035C ADY4Q05955 493 aa3.76□□□□□ -1.81
SHE4YOR035C DCS2Q12123 353 aa3.76□□□□□ -1.81
SHE4YOR035C RET2P43621 546 aa3.75□□□□□ -1.81
SHE4YOR035C YMR206WQ03695 313 aa3.75□□□□□ -1.81
SHE4YOR035C CTK1Q03957 528 aaKnown RBP3.75□□□□□ -1.81
SHE4YOR035C IRC13Q08630 104 aa3.75□□□□□ -1.81
SHE4YOR035C PYC1P11154 1178 aaKnown RBP3.75□□□□□ -1.81
SHE4YOR035C MAL31P38156 614 aa3.75□□□□□ -1.81
SHE4YOR035C CHS7P38843 316 aa3.75□□□□□ -1.81
SHE4YOR035C YJR039WP47107 1121 aa3.75□□□□□ -1.81
SHE4YOR035C MTL1P53214 551 aa3.75□□□□□ -1.81
SHE4YOR035C REC102Q02721 264 aa3.75□□□□□ -1.81
SHE4YOR035C HFD1Q04458 532 aa3.75□□□□□ -1.81
SHE4YOR035C PPS1P38148 807 aa3.74□□□□□ -1.81
SHE4YOR035C SSZ1P38788 538 aaKnown RBP3.74□□□□□ -1.81
SHE4YOR035C YHR202WP38887 602 aa3.74□□□□□ -1.81
SHE4YOR035C UBP12P39538 1254 aa3.74□□□□□ -1.81
SHE4YOR035C YEN1P40028 759 aa3.74□□□□□ -1.81
SHE4YOR035C HOS4P40480 1083 aa3.74□□□□□ -1.81
SHE4YOR035C YJL163CP46996 555 aa3.74□□□□□ -1.81
SHE4YOR035C SGO1Q08490 590 aa3.74□□□□□ -1.81
SHE4YOR035C TSR4P25040 408 aa3.74□□□□□ -1.81
SHE4YOR035C ISA1Q07821 250 aaPredicted RBP3.74□□□□□ -1.81
SHE4YOR035C RNR1P21524 888 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms