RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeastyeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT21YMR179W MTR3P48240 250 aaPredicted RBP2.37□□□□□ -2.03
SPT21YMR179W YDR338CQ05497 695 aa2.37□□□□□ -2.03
SPT21YMR179W PHR1P05066 565 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
SPT21YMR179W ADY2P25613 283 aa2.37□□□□□ -2.03
SPT21YMR179W CBR1P38626 284 aaKnown RBP2.37□□□□□ -2.03
SPT21YMR179W ZDS1P50111 915 aaKnown RBP2.37□□□□□ -2.03
SPT21YMR179W HUL5P53119 910 aa2.37□□□□□ -2.03
SPT21YMR179W DIF1O13577 133 aa2.36□□□□□ -2.03
SPT21YMR179W EMP70P32802 667 aa2.36□□□□□ -2.03
SPT21YMR179W LYS9P38999 446 aa2.36□□□□□ -2.03
SPT21YMR179W SHR5P41912 237 aa2.36□□□□□ -2.03
SPT21YMR179W YAP1802P53309 568 aa2.36□□□□□ -2.03
SPT21YMR179W GAD1Q04792 585 aa2.36□□□□□ -2.03
SPT21YMR179W YNL162W-AQ3E7A8 72 aa2.36□□□□□ -2.03
SPT21YMR179W PER1P25625 357 aa2.35□□□□□ -2.03
SPT21YMR179W CCT3P39077 534 aaKnown RBP2.35□□□□□ -2.03
SPT21YMR179W YJL206CP39529 758 aa2.35□□□□□ -2.03
SPT21YMR179W MTL1P53214 551 aa2.35□□□□□ -2.03
SPT21YMR179W YKL033W-AQ86ZR7 236 aa2.35□□□□□ -2.03
SPT21YMR179W PYC1P11154 1178 aaKnown RBP2.35□□□□□ -2.03
SPT21YMR179W ADE2P21264 571 aaKnown RBP2.35□□□□□ -2.03
SPT21YMR179W DMC1P25453 334 aa2.35□□□□□ -2.03
SPT21YMR179W YHR112CP38716 378 aa2.35□□□□□ -2.03
SPT21YMR179W FMO1P38866 432 aa2.35□□□□□ -2.03
SPT21YMR179W REV7P38927 245 aa2.35□□□□□ -2.03
SPT21YMR179W NDC80P40460 691 aa2.35□□□□□ -2.03
SPT21YMR179W PRP31P49704 494 aaPredicted RBP2.35□□□□□ -2.03
SPT21YMR179W PAN2P53010 1115 aaPredicted RBP2.35□□□□□ -2.03
SPT21YMR179W RGC1Q06108 1083 aaKnown RBP2.35□□□□□ -2.03
SPT21YMR179W MDM10P18409 493 aa2.34□□□□□ -2.03
SPT21YMR179W APL2P36000 726 aaPredicted RBP2.34□□□□□ -2.03
SPT21YMR179W HRB1P38922 454 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SPT21YMR179W FHN1P53279 174 aa2.34□□□□□ -2.03
SPT21YMR179W ARG5,6Q01217 863 aa2.34□□□□□ -2.03
SPT21YMR179W ALY2P47029 1046 aa2.34□□□□□ -2.04
SPT21YMR179W MAL11P53048 616 aa2.34□□□□□ -2.04
SPT21YMR179W YLR149CQ99296 730 aa2.34□□□□□ -2.04
SPT21YMR179W HRP1Q99383 534 aaKnown RBP2.34□□□□□ -2.04
SPT21YMR179W ERG6P25087 383 aaKnown RBP2.33□□□□□ -2.04
SPT21YMR179W MTC2P34246 357 aa2.33□□□□□ -2.04
SPT21YMR179W SFB3P38810 929 aa2.33□□□□□ -2.04
SPT21YMR179W NUP60P39705 539 aa2.33□□□□□ -2.04
SPT21YMR179W YBP2P53169 641 aa2.33□□□□□ -2.04
SPT21YMR179W GAL11P19659 1081 aa2.33□□□□□ -2.04
SPT21YMR179W MCD4P36051 919 aa2.33□□□□□ -2.04
SPT21YMR179W MIP6P38760 659 aaKnown RBP2.33□□□□□ -2.04
SPT21YMR179W GDH3P39708 457 aa2.33□□□□□ -2.04
SPT21YMR179W BDH2P39713 417 aa2.33□□□□□ -2.04
SPT21YMR179W YEL020CP39994 560 aa2.33□□□□□ -2.04
SPT21YMR179W BNA2P47125 453 aa2.33□□□□□ -2.04
SPT21YMR179W APM1Q00776 475 aaPredicted RBP2.33□□□□□ -2.04
SPT21YMR179W CTK1Q03957 528 aaKnown RBP2.33□□□□□ -2.04
SPT21YMR179W HMO1Q03973 246 aaKnown RBP2.33□□□□□ -2.04
SPT21YMR179W HOF1Q05080 669 aa2.33□□□□□ -2.04
SPT21YMR179W THI7Q05998 598 aa2.33□□□□□ -2.04
SPT21YMR179W MCM21Q06675 368 aa2.33□□□□□ -2.04
SPT21YMR179W MVD1P32377 396 aaKnown RBP2.32□□□□□ -2.04
SPT21YMR179W PHO11P35842 467 aa2.32□□□□□ -2.04
SPT21YMR179W GLG1P36143 616 aa2.32□□□□□ -2.04
SPT21YMR179W TRZ1P36159 838 aaPredicted RBP2.32□□□□□ -2.04
SPT21YMR179W PHO12P38693 467 aa2.32□□□□□ -2.04
SPT21YMR179W ARG2P40360 574 aa2.32□□□□□ -2.04
SPT21YMR179W CTR1P49573 406 aa2.32□□□□□ -2.04
SPT21YMR179W MLH3Q12083 715 aa2.32□□□□□ -2.04
SPT21YMR179W RPN13O13563 156 aa2.31□□□□□ -2.04
SPT21YMR179W SPO11P23179 398 aa2.31□□□□□ -2.04
SPT21YMR179W GET2P40056 285 aa2.31□□□□□ -2.04
SPT21YMR179W ATG4P53867 494 aa2.31□□□□□ -2.04
SPT21YMR179W NSE3Q05541 303 aa2.31□□□□□ -2.04
SPT21YMR179W Q0142Q9ZZW4 58 aa2.31□□□□□ -2.04
SPT21YMR179W THR1P17423 357 aaKnown RBP2.31□□□□□ -2.04
SPT21YMR179W MIH1P23748 554 aa2.31□□□□□ -2.04
SPT21YMR179W GID8P40208 455 aa2.31□□□□□ -2.04
SPT21YMR179W AFT2Q08957 416 aa2.31□□□□□ -2.04
SPT21YMR179W PAC2P39937 518 aa2.3□□□□□ -2.04
SPT21YMR179W ORC4P54791 529 aa2.3□□□□□ -2.04
SPT21YMR179W ERR1P0CX10 437 aa2.3□□□□□ -2.04
SPT21YMR179W ERR2P0CX11 437 aa2.3□□□□□ -2.04
SPT21YMR179W STI1P15705 589 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SPT21YMR179W SET3P36124 751 aa2.3□□□□□ -2.04
SPT21YMR179W CAF16P43569 289 aa2.3□□□□□ -2.04
SPT21YMR179W MRI1Q06489 411 aaKnown RBP2.3□□□□□ -2.04
SPT21YMR179W CDC53Q12018 815 aaKnown RBP2.3□□□□□ -2.04
SPT21YMR179W MDM12Q92328 271 aa2.3□□□□□ -2.04
SPT21YMR179W CDC9P04819 755 aa2.29□□□□□ -2.04
SPT21YMR179W RNR1P21524 888 aaKnown RBP2.29□□□□□ -2.04
SPT21YMR179W YKR051WP36142 418 aa2.29□□□□□ -2.04
SPT21YMR179W APT2P36973 181 aa2.29□□□□□ -2.04
SPT21YMR179W CHZ1P40019 153 aaPredicted RBP2.29□□□□□ -2.04
SPT21YMR179W YFL052WP43551 465 aa2.29□□□□□ -2.04
SPT21YMR179W UBC9P50623 157 aaPredicted RBP2.29□□□□□ -2.04
SPT21YMR179W MRK1P50873 501 aa2.29□□□□□ -2.04
SPT21YMR179W NOP7P53261 605 aaKnown RBP2.29□□□□□ -2.04
SPT21YMR179W SNP1Q00916 300 aaPredicted RBP2.29□□□□□ -2.04
SPT21YMR179W ICT1Q12385 394 aa2.29□□□□□ -2.04
SPT21YMR179W ZRT2Q12436 422 aa2.29□□□□□ -2.04
SPT21YMR179W PEX1P24004 1043 aa2.29□□□□□ -2.04
SPT21YMR179W SEC6P32844 805 aa2.29□□□□□ -2.04
SPT21YMR179W STO1P34160 861 aaKnown RBP2.29□□□□□ -2.04
SPT21YMR179W YKR018CP36114 725 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms