RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W APM1Q00776 475 aaPredicted RBP3.85□□□□□ -1.79
DDR48YMR173W MET7Q08645 548 aa3.85□□□□□ -1.79
DDR48YMR173W HIS7P33734 552 aaKnown RBP3.84□□□□□ -1.79
DDR48YMR173W YJL206CP39529 758 aa3.84□□□□□ -1.79
DDR48YMR173W CHZ1P40019 153 aaPredicted RBP3.84□□□□□ -1.79
DDR48YMR173W RLP7P40693 322 aaKnown RBP3.84□□□□□ -1.79
DDR48YMR173W HSV2P50079 448 aaPredicted RBP3.84□□□□□ -1.79
DDR48YMR173W ZDS1P50111 915 aaKnown RBP3.84□□□□□ -1.79
DDR48YMR173W TEL2P53038 688 aa3.84□□□□□ -1.79
DDR48YMR173W ZIP2P53061 704 aa3.84□□□□□ -1.79
DDR48YMR173W SMX3P54999 86 aaPredicted RBP3.84□□□□□ -1.79
DDR48YMR173W ASM4Q05166 528 aa3.84□□□□□ -1.79
DDR48YMR173W TAF3Q12297 353 aa3.84□□□□□ -1.79
DDR48YMR173W YBR259WP38338 688 aa3.83□□□□□ -1.8
DDR48YMR173W BCD1P38772 366 aa3.83□□□□□ -1.8
DDR48YMR173W HOS4P40480 1083 aa3.83□□□□□ -1.8
DDR48YMR173W BAP3P41815 604 aa3.83□□□□□ -1.8
DDR48YMR173W CCT7P42943 550 aaKnown RBP3.83□□□□□ -1.8
DDR48YMR173W MRI1Q06489 411 aaKnown RBP3.83□□□□□ -1.8
DDR48YMR173W SPO11P23179 398 aa3.82□□□□□ -1.8
DDR48YMR173W GDH3P39708 457 aa3.82□□□□□ -1.8
DDR48YMR173W MAL11P53048 616 aa3.82□□□□□ -1.8
DDR48YMR173W TGL5Q12043 749 aa3.82□□□□□ -1.8
DDR48YMR173W DIF1O13577 133 aa3.81□□□□□ -1.8
DDR48YMR173W PHR1P05066 565 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
DDR48YMR173W MTC2P34246 357 aa3.81□□□□□ -1.8
DDR48YMR173W SHR5P41912 237 aa3.81□□□□□ -1.8
DDR48YMR173W UBC11P52492 156 aa3.81□□□□□ -1.8
DDR48YMR173W RPN4Q03465 531 aa3.81□□□□□ -1.8
DDR48YMR173W CDC53Q12018 815 aaKnown RBP3.81□□□□□ -1.8
DDR48YMR173W YOL098CQ12496 1037 aa3.81□□□□□ -1.8
DDR48YMR173W SIR3P06701 978 aa3.8□□□□□ -1.8
DDR48YMR173W ORC2P32833 620 aa3.8□□□□□ -1.8
DDR48YMR173W OCA5P38738 679 aa3.8□□□□□ -1.8
DDR48YMR173W YEL020CP39994 560 aa3.8□□□□□ -1.8
DDR48YMR173W MTR3P48240 250 aaPredicted RBP3.8□□□□□ -1.8
DDR48YMR173W YDR338CQ05497 695 aa3.8□□□□□ -1.8
DDR48YMR173W MDM12Q92328 271 aa3.8□□□□□ -1.8
DDR48YMR173W HIR1P32479 840 aa3.79□□□□□ -1.8
DDR48YMR173W BNA2P47125 453 aa3.79□□□□□ -1.8
DDR48YMR173W TEX1P53851 422 aaKnown RBP3.79□□□□□ -1.8
DDR48YMR173W PER1P25625 357 aa3.78□□□□□ -1.8
DDR48YMR173W NDC80P40460 691 aa3.78□□□□□ -1.8
DDR48YMR173W BUD6P41697 788 aa3.78□□□□□ -1.8
DDR48YMR173W ALY2P47029 1046 aa3.78□□□□□ -1.8
DDR48YMR173W YAP1802P53309 568 aa3.78□□□□□ -1.8
DDR48YMR173W GAD1Q04792 585 aa3.78□□□□□ -1.8
DDR48YMR173W YOR131CQ12486 218 aa3.78□□□□□ -1.8
DDR48YMR173W RPN13O13563 156 aa3.77□□□□□ -1.81
DDR48YMR173W STO1P34160 861 aaKnown RBP3.77□□□□□ -1.81
DDR48YMR173W APL2P36000 726 aaPredicted RBP3.77□□□□□ -1.81
DDR48YMR173W MCD4P36051 919 aa3.77□□□□□ -1.81
DDR48YMR173W UBS1P38290 277 aa3.77□□□□□ -1.81
DDR48YMR173W CAF16P43569 289 aa3.77□□□□□ -1.81
DDR48YMR173W GAT1P43574 510 aa3.77□□□□□ -1.81
DDR48YMR173W YBP2P53169 641 aa3.77□□□□□ -1.81
DDR48YMR173W ARG5,6Q01217 863 aa3.77□□□□□ -1.81
DDR48YMR173W MIP6P38760 659 aaKnown RBP3.76□□□□□ -1.81
DDR48YMR173W CCT3P39077 534 aaKnown RBP3.76□□□□□ -1.81
DDR48YMR173W GID8P40208 455 aa3.76□□□□□ -1.81
DDR48YMR173W PRP31P49704 494 aaPredicted RBP3.76□□□□□ -1.81
DDR48YMR173W SCS3P53012 380 aa3.76□□□□□ -1.81
DDR48YMR173W SNP1Q00916 300 aaPredicted RBP3.76□□□□□ -1.81
DDR48YMR173W RIM13Q03792 727 aa3.76□□□□□ -1.81
DDR48YMR173W HMO1Q03973 246 aaKnown RBP3.76□□□□□ -1.81
DDR48YMR173W MCM21Q06675 368 aa3.76□□□□□ -1.81
DDR48YMR173W YLR149CQ99296 730 aa3.76□□□□□ -1.81
DDR48YMR173W ERR1P0CX10 437 aa3.75□□□□□ -1.81
DDR48YMR173W ERR2P0CX11 437 aa3.75□□□□□ -1.81
DDR48YMR173W HOM2P13663 365 aaKnown RBP3.75□□□□□ -1.81
DDR48YMR173W REV7P38927 245 aa3.75□□□□□ -1.81
DDR48YMR173W ADE2P21264 571 aaKnown RBP3.74□□□□□ -1.81
DDR48YMR173W VPS34P22543 875 aa3.74□□□□□ -1.81
DDR48YMR173W GSY1P23337 708 aa3.74□□□□□ -1.81
DDR48YMR173W SRP40P32583 406 aaPredicted RBP3.74□□□□□ -1.81
DDR48YMR173W TRZ1P36159 838 aaPredicted RBP3.74□□□□□ -1.81
DDR48YMR173W PBP2P38151 413 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
DDR48YMR173W SEG1Q04279 960 aa3.74□□□□□ -1.81
DDR48YMR173W COG8Q04632 607 aa3.74□□□□□ -1.81
DDR48YMR173W CDC9P04819 755 aa3.73□□□□□ -1.81
DDR48YMR173W PYC1P11154 1178 aaKnown RBP3.73□□□□□ -1.81
DDR48YMR173W MIH1P23748 554 aa3.73□□□□□ -1.81
DDR48YMR173W TIM23P32897 222 aa3.73□□□□□ -1.81
DDR48YMR173W GLG1P36143 616 aa3.73□□□□□ -1.81
DDR48YMR173W YHR112CP38716 378 aa3.73□□□□□ -1.81
DDR48YMR173W RPN10P38886 268 aaKnown RBP3.73□□□□□ -1.81
DDR48YMR173W LYS9P38999 446 aa3.73□□□□□ -1.81
DDR48YMR173W BDH2P39713 417 aa3.73□□□□□ -1.81
DDR48YMR173W PAC2P39937 518 aa3.73□□□□□ -1.81
DDR48YMR173W BNA3P47039 444 aaKnown RBP3.73□□□□□ -1.81
DDR48YMR173W FHN1P53279 174 aa3.73□□□□□ -1.81
DDR48YMR173W ORC4P54791 529 aa3.73□□□□□ -1.81
DDR48YMR173W UGO1Q03327 502 aa3.73□□□□□ -1.81
DDR48YMR173W CTK1Q03957 528 aaKnown RBP3.73□□□□□ -1.81
DDR48YMR173W OSW1Q08692 278 aa3.73□□□□□ -1.81
DDR48YMR173W YLR125WQ12138 136 aa3.73□□□□□ -1.81
DDR48YMR173W YKL033W-AQ86ZR7 236 aa3.73□□□□□ -1.81
DDR48YMR173W MSH2P25847 964 aa3.72□□□□□ -1.81
DDR48YMR173W YUR1P26725 428 aa3.72□□□□□ -1.81
DDR48YMR173W YKL091CP33324 310 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms