RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C YFL052WP43551 465 aa5.37□□□□□ -1.55
VPS71YML041C YGR021WP53212 290 aa5.37□□□□□ -1.55
VPS71YML041C ASM4Q05166 528 aa5.37□□□□□ -1.55
VPS71YML041C WHI4Q07655 649 aaKnown RBP5.37□□□□□ -1.55
VPS71YML041C SEC65P29478 273 aa5.36□□□□□ -1.55
VPS71YML041C NIC96P34077 839 aa5.36□□□□□ -1.55
VPS71YML041C YKR073CP36153 106 aa5.36□□□□□ -1.55
VPS71YML041C AKL1P38080 1108 aaKnown RBP5.36□□□□□ -1.55
VPS71YML041C YHR078WP38799 552 aa5.36□□□□□ -1.55
VPS71YML041C MET12P46151 657 aa5.36□□□□□ -1.55
VPS71YML041C SSY5P47002 699 aa5.36□□□□□ -1.55
VPS71YML041C SLD3P53135 668 aa5.36□□□□□ -1.55
VPS71YML041C YHM2Q04013 314 aa5.36□□□□□ -1.55
VPS71YML041C PHM6Q05637 104 aa5.36□□□□□ -1.55
VPS71YML041C YDL177CQ12257 170 aa5.36□□□□□ -1.55
VPS71YML041C NOP56Q12460 504 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
VPS71YML041C PRP4P20053 465 aaKnown RBP5.35□□□□□ -1.55
VPS71YML041C YRB30P53107 440 aaPredicted RBP5.35□□□□□ -1.55
VPS71YML041C PUS2P53167 370 aa5.35□□□□□ -1.55
VPS71YML041C PTA1Q01329 785 aaPredicted RBP5.35□□□□□ -1.55
VPS71YML041C SVL3Q03088 825 aaKnown RBP5.35□□□□□ -1.55
VPS71YML041C ATG16Q03818 150 aa5.35□□□□□ -1.55
VPS71YML041C ECM16Q04217 1267 aaKnown RBP5.35□□□□□ -1.55
VPS71YML041C DUS4Q06063 367 aa5.35□□□□□ -1.55
VPS71YML041C MLC2Q06580 163 aa5.35□□□□□ -1.55
VPS71YML041C YDL121CQ07541 149 aa5.35□□□□□ -1.55
VPS71YML041C TUB3P09734 445 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C TRX2P22803 104 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C YPT7P32939 208 aa5.34□□□□□ -1.55
VPS71YML041C POA1P38218 177 aa5.34□□□□□ -1.55
VPS71YML041C CTH1P47976 325 aa5.34□□□□□ -1.55
VPS71YML041C PSP2P50109 593 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C INP52P50942 1183 aa5.34□□□□□ -1.55
VPS71YML041C FOL2P51601 243 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C NCS6P53088 359 aa5.34□□□□□ -1.55
VPS71YML041C SPC105P53148 917 aa5.34□□□□□ -1.55
VPS71YML041C CNM67P53865 581 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C ASI2P53895 289 aa5.34□□□□□ -1.55
VPS71YML041C SLU7Q02775 382 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C MUS81Q04149 632 aaPredicted RBP5.34□□□□□ -1.55
VPS71YML041C TMA64Q04600 565 aaKnown RBP5.34□□□□□ -1.55
VPS71YML041C PEX15Q08215 383 aa5.34□□□□□ -1.55
VPS71YML041C YPL277CQ08989 487 aa5.34□□□□□ -1.55
VPS71YML041C YPR027CQ12079 277 aa5.34□□□□□ -1.55
VPS71YML041C CDC26P14724 124 aa5.33□□□□□ -1.56
VPS71YML041C MAC1P35192 417 aa5.33□□□□□ -1.56
VPS71YML041C OMA1P36163 345 aa5.33□□□□□ -1.56
VPS71YML041C LAM1P38851 1228 aa5.33□□□□□ -1.56
VPS71YML041C PUS4P48567 403 aaKnown RBP5.33□□□□□ -1.56
VPS71YML041C VPS62P53285 467 aa5.33□□□□□ -1.56
VPS71YML041C ECM38Q05902 660 aaPredicted RBP5.33□□□□□ -1.56
VPS71YML041C HMI1Q12039 706 aa5.33□□□□□ -1.56
VPS71YML041C NKP1Q12493 238 aa5.33□□□□□ -1.56
VPS71YML041C HIS5P07172 385 aa5.32□□□□□ -1.56
VPS71YML041C MSS18P08593 268 aa5.32□□□□□ -1.56
VPS71YML041C YEF3P16521 1044 aaKnown RBP5.32□□□□□ -1.56
VPS71YML041C PUB1P32588 453 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
VPS71YML041C YKU70P32807 602 aa5.32□□□□□ -1.56
VPS71YML041C YKL133CP36066 463 aa5.32□□□□□ -1.56
VPS71YML041C YHL041WP38730 149 aa5.32□□□□□ -1.56
VPS71YML041C ETP1P38748 585 aaKnown RBP5.32□□□□□ -1.56
VPS71YML041C IES1P43579 692 aa5.32□□□□□ -1.56
VPS71YML041C CEG1Q01159 459 aaPredicted RBP5.32□□□□□ -1.56
VPS71YML041C SGD1Q06132 899 aa5.32□□□□□ -1.56
VPS71YML041C MED7Q08278 222 aa5.32□□□□□ -1.56
VPS71YML041C HOP1P20050 605 aa5.31□□□□□ -1.56
VPS71YML041C SEC21P32074 935 aaKnown RBP5.31□□□□□ -1.56
VPS71YML041C SAK1P38990 1142 aa5.31□□□□□ -1.56
VPS71YML041C MEF2P39677 819 aa5.31□□□□□ -1.56
VPS71YML041C PFA3P42836 336 aa5.31□□□□□ -1.56
VPS71YML041C IRC5P43610 853 aa5.31□□□□□ -1.56
VPS71YML041C SET2P46995 733 aaKnown RBP5.31□□□□□ -1.56
VPS71YML041C PAP2P53632 584 aaKnown RBP5.31□□□□□ -1.56
VPS71YML041C NOP15P53927 220 aaPredicted RBP5.31□□□□□ -1.56
VPS71YML041C YDR132CQ03900 495 aa5.31□□□□□ -1.56
VPS71YML041C YLR407WQ06070 228 aa5.31□□□□□ -1.56
VPS71YML041C MF(ALPHA)2P32435 120 aa5.3□□□□□ -1.56
VPS71YML041C PTH2P34222 208 aa5.3□□□□□ -1.56
VPS71YML041C KTR4P38131 464 aa5.3□□□□□ -1.56
VPS71YML041C TOS1P38288 455 aa5.3□□□□□ -1.56
VPS71YML041C MSS4P38994 779 aa5.3□□□□□ -1.56
VPS71YML041C HIS6P40545 261 aa5.3□□□□□ -1.56
VPS71YML041C HMO1Q03973 246 aaKnown RBP5.3□□□□□ -1.56
VPS71YML041C BRE1Q07457 700 aaKnown RBP5.3□□□□□ -1.56
VPS71YML041C ACO1P19414 778 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
VPS71YML041C IME1P21190 360 aa5.29□□□□□ -1.56
VPS71YML041C SED4P25365 1065 aa5.29□□□□□ -1.56
VPS71YML041C YHR202WP38887 602 aa5.29□□□□□ -1.56
VPS71YML041C PZF1P39933 429 aa5.29□□□□□ -1.56
VPS71YML041C VID28P40547 921 aa5.29□□□□□ -1.56
VPS71YML041C QRI7P43122 407 aa5.29□□□□□ -1.56
VPS71YML041C GCV2P49095 1034 aa5.29□□□□□ -1.56
VPS71YML041C RNR4P49723 345 aaKnown RBP5.29□□□□□ -1.56
VPS71YML041C GPD1Q00055 391 aaKnown RBP5.29□□□□□ -1.56
VPS71YML041C ARG5,6Q01217 863 aa5.29□□□□□ -1.56
VPS71YML041C ROT1Q03691 256 aa5.29□□□□□ -1.56
VPS71YML041C YPS7Q06325 596 aa5.29□□□□□ -1.56
VPS71YML041C BRE4Q07660 1125 aa5.29□□□□□ -1.56
VPS71YML041C YLR415CO13578 112 aa5.28□□□□□ -1.56
VPS71YML041C RPS17AP02407 136 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 36 ms