RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W RSC8P43609 557 aaKnown RBP5.95□□□□□ -1.46
VPS36YLR417W MET12P46151 657 aa5.95□□□□□ -1.46
VPS36YLR417W MTR3P48240 250 aaPredicted RBP5.95□□□□□ -1.46
VPS36YLR417W RNR4P49723 345 aaKnown RBP5.95□□□□□ -1.46
VPS36YLR417W YGR021WP53212 290 aa5.95□□□□□ -1.46
VPS36YLR417W ARP4P80428 489 aa5.95□□□□□ -1.46
VPS36YLR417W MLC2Q06580 163 aa5.95□□□□□ -1.46
VPS36YLR417W UPC2Q12151 913 aa5.95□□□□□ -1.46
VPS36YLR417W SWI6P09959 803 aa5.94□□□□□ -1.46
VPS36YLR417W PGI1P12709 554 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W TRX2P22803 104 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W SED4P25365 1065 aa5.94□□□□□ -1.46
VPS36YLR417W YKR075CP36155 307 aa5.94□□□□□ -1.46
VPS36YLR417W RRP8P38961 392 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W BEM4P39011 633 aa5.94□□□□□ -1.46
VPS36YLR417W PZF1P39933 429 aa5.94□□□□□ -1.46
VPS36YLR417W IES5P40060 125 aa5.94□□□□□ -1.46
VPS36YLR417W ORC4P54791 529 aa5.94□□□□□ -1.46
VPS36YLR417W BUD21Q08492 214 aaPredicted RBP5.94□□□□□ -1.46
VPS36YLR417W SER1P33330 395 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W FAT1P38225 669 aa5.94□□□□□ -1.46
VPS36YLR417W ETP1P38748 585 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W PAP2P53632 584 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W BRE5P53741 515 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W PLB2Q03674 706 aa5.94□□□□□ -1.46
VPS36YLR417W SGD1Q06132 899 aa5.94□□□□□ -1.46
VPS36YLR417W WHI4Q07655 649 aaKnown RBP5.94□□□□□ -1.46
VPS36YLR417W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
VPS36YLR417W HCA4P20448 770 aaKnown RBP5.93□□□□□ -1.46
VPS36YLR417W STE14P32584 239 aa5.93□□□□□ -1.46
VPS36YLR417W YKR073CP36153 106 aa5.93□□□□□ -1.46
VPS36YLR417W SAK1P38990 1142 aa5.93□□□□□ -1.46
VPS36YLR417W NAB3P38996 802 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
VPS36YLR417W YOR352WQ08816 343 aa5.93□□□□□ -1.46
VPS36YLR417W HIS5P07172 385 aa5.92□□□□□ -1.46
VPS36YLR417W AKL1P38080 1108 aaKnown RBP5.92□□□□□ -1.46
VPS36YLR417W TOS1P38288 455 aa5.92□□□□□ -1.46
VPS36YLR417W TAN1P53072 289 aaPredicted RBP5.92□□□□□ -1.46
VPS36YLR417W SNO2P53823 222 aa5.92□□□□□ -1.46
VPS36YLR417W ECM16Q04217 1267 aaKnown RBP5.92□□□□□ -1.46
VPS36YLR417W GPR1Q12361 961 aa5.92□□□□□ -1.46
VPS36YLR417W LAM1P38851 1228 aa5.91□□□□□ -1.46
VPS36YLR417W CHA4P43634 648 aa5.91□□□□□ -1.46
VPS36YLR417W SET2P46995 733 aaKnown RBP5.91□□□□□ -1.46
VPS36YLR417W GTF1P53260 183 aaPredicted RBP5.91□□□□□ -1.46
VPS36YLR417W ROT1Q03691 256 aa5.91□□□□□ -1.46
VPS36YLR417W MUS81Q04149 632 aaPredicted RBP5.91□□□□□ -1.46
VPS36YLR417W ECM38Q05902 660 aaPredicted RBP5.91□□□□□ -1.46
VPS36YLR417W PTH2P34222 208 aa5.91□□□□□ -1.46
VPS36YLR417W YHR202WP38887 602 aa5.91□□□□□ -1.46
VPS36YLR417W CCT8P47079 568 aaKnown RBP5.91□□□□□ -1.46
VPS36YLR417W CNM67P53865 581 aaKnown RBP5.91□□□□□ -1.46
VPS36YLR417W ASI2P53895 289 aa5.91□□□□□ -1.46
VPS36YLR417W YDL177CQ12257 170 aa5.91□□□□□ -1.46
VPS36YLR417W PFK1P16861 987 aaKnown RBP5.9□□□□□ -1.47
VPS36YLR417W ATP12P22135 325 aa5.9□□□□□ -1.47
VPS36YLR417W NGG1P32494 702 aa5.9□□□□□ -1.47
VPS36YLR417W PUB1P32588 453 aaKnown RBP RIP-Chip data5.9□□□□□ -1.47not detected
VPS36YLR417W HIS6P40545 261 aa5.9□□□□□ -1.47
VPS36YLR417W PFA3P42836 336 aa5.9□□□□□ -1.47
VPS36YLR417W YBP2P53169 641 aa5.9□□□□□ -1.47
VPS36YLR417W HOL1P53389 586 aa5.9□□□□□ -1.47
VPS36YLR417W NOP15P53927 220 aaPredicted RBP5.9□□□□□ -1.47
VPS36YLR417W LEE1Q02799 301 aaKnown RBP5.9□□□□□ -1.47
VPS36YLR417W YLR407WQ06070 228 aa5.9□□□□□ -1.47
VPS36YLR417W APN2P38207 520 aa5.89□□□□□ -1.47
VPS36YLR417W GCV2P49095 1034 aa5.89□□□□□ -1.47
VPS36YLR417W NCS6P53088 359 aa5.89□□□□□ -1.47
VPS36YLR417W YMR210WQ03649 449 aa5.89□□□□□ -1.47
VPS36YLR417W ASM4Q05166 528 aa5.89□□□□□ -1.47
VPS36YLR417W HMI1Q12039 706 aa5.89□□□□□ -1.47
VPS36YLR417W SWM1Q12379 170 aa5.89□□□□□ -1.47
VPS36YLR417W YHL041WP38730 149 aa5.88□□□□□ -1.47
VPS36YLR417W MEF2P39677 819 aa5.88□□□□□ -1.47
VPS36YLR417W GID8P40208 455 aa5.88□□□□□ -1.47
VPS36YLR417W VHR1P40522 640 aa5.88□□□□□ -1.47
VPS36YLR417W BRE4Q07660 1125 aa5.88□□□□□ -1.47
VPS36YLR417W GPB1Q08886 897 aa5.88□□□□□ -1.47
VPS36YLR417W CDC6P09119 513 aa5.88□□□□□ -1.47
VPS36YLR417W GLN4P13188 809 aaKnown RBP5.88□□□□□ -1.47
VPS36YLR417W SRP68P38687 599 aaKnown RBP5.88□□□□□ -1.47
VPS36YLR417W VID28P40547 921 aa5.88□□□□□ -1.47
VPS36YLR417W VPS62P53285 467 aa5.88□□□□□ -1.47
VPS36YLR417W DUS4Q06063 367 aa5.88□□□□□ -1.47
VPS36YLR417W RXT3Q07458 294 aa5.88□□□□□ -1.47
VPS36YLR417W YLR415CO13578 112 aa5.87□□□□□ -1.47
VPS36YLR417W CDC26P14724 124 aa5.87□□□□□ -1.47
VPS36YLR417W HOP1P20050 605 aa5.87□□□□□ -1.47
VPS36YLR417W EMC1P25574 760 aa5.87□□□□□ -1.47
VPS36YLR417W SEC21P32074 935 aaKnown RBP5.87□□□□□ -1.47
VPS36YLR417W MRS6P32864 603 aaKnown RBP5.87□□□□□ -1.47
VPS36YLR417W ENP2P48234 707 aaKnown RBP5.87□□□□□ -1.47
VPS36YLR417W PKH1Q03407 766 aa5.87□□□□□ -1.47
VPS36YLR417W PSR2Q07949 397 aa5.87□□□□□ -1.47
VPS36YLR417W NOP12Q08208 459 aaKnown RBP5.87□□□□□ -1.47
VPS36YLR417W RPS17AP02407 136 aaKnown RBP5.86□□□□□ -1.47
VPS36YLR417W TUB3P09734 445 aaKnown RBP5.86□□□□□ -1.47
VPS36YLR417W RPS17BP14127 136 aaKnown RBP5.86□□□□□ -1.47
VPS36YLR417W IMG2P25642 146 aaPredicted RBP5.86□□□□□ -1.47
VPS36YLR417W YBR259WP38338 688 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 140.1 ms