RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	PUS1	Q12211	544 aa	Known RBP	7.22	□□□□□ -1.25
MSC3	YLR219W	CTF3	Q12748	733 aa		7.22	□□□□□ -1.25
MSC3	YLR219W	AI5_BETA	Q9ZZX0	354 aa		7.22	□□□□□ -1.25
MSC3	YLR219W	COX11	P19516	300 aa	Known RBP	7.21	□□□□□ -1.26
MSC3	YLR219W	RNR1	P21524	888 aa	Known RBP	7.21	□□□□□ -1.26
MSC3	YLR219W	RAD57	P25301	460 aa		7.21	□□□□□ -1.26
MSC3	YLR219W	SLX1	P38324	304 aa		7.21	□□□□□ -1.26
MSC3	YLR219W	SET5	P38890	526 aa	Known RBP	7.21	□□□□□ -1.26
MSC3	YLR219W	SEC9	P40357	651 aa		7.21	□□□□□ -1.26
MSC3	YLR219W	EEB1	Q02891	456 aa		7.21	□□□□□ -1.26
MSC3	YLR219W	UTP5	Q04177	643 aa	Known RBP	7.21	□□□□□ -1.26
MSC3	YLR219W	ECM3	Q99252	613 aa		7.21	□□□□□ -1.26
MSC3	YLR219W	HIP1	P06775	603 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	CDC33	P07260	213 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	SEC23	P15303	768 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	EXO5	P38289	585 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	SAH1	P39954	449 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	HXT8	P40886	569 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	SBE2	P42223	864 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	SPO74	P45819	413 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	SMC3	P47037	1230 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	ALT2	P52892	507 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	SIL1	Q08199	421 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	TIF1	P10081	395 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	STO1	P34160	861 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	WHI3	P34761	661 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	HEL1	P36113	551 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	AGP2	P38090	596 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	YMR124W	P39523	943 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	ESL1	P40456	1118 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	EFM4	P40516	257 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	7.2	□□□□□ -1.26	not detected
MSC3	YLR219W	ALT1	P52893	592 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	DRN1	P53255	507 aa	Known RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	OPY2	Q06810	360 aa		7.2	□□□□□ -1.26
MSC3	YLR219W	DNL4	Q08387	944 aa	Predicted RBP	7.2	□□□□□ -1.26
MSC3	YLR219W	GAL10	P04397	699 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	MAC1	P35192	417 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	DYS1	P38791	387 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	YGR130C	P53278	816 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	TSR1	Q07381	788 aa	Known RBP	7.19	□□□□□ -1.26
MSC3	YLR219W	YLR001C	Q07895	862 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	TAO3	P40468	2376 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	CHS1	P08004	1131 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	COQ8	P27697	501 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	CYS3	P31373	394 aa	Known RBP	7.19	□□□□□ -1.26
MSC3	YLR219W	KAP123	P40069	1113 aa	Known RBP	7.19	□□□□□ -1.26
MSC3	YLR219W	OPT1	P40897	799 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	STU2	P46675	888 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	PHO86	P46956	311 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	NUP42	P49686	430 aa	Known RBP	7.19	□□□□□ -1.26
MSC3	YLR219W	SOV1	Q04748	898 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	YLR455W	Q06188	304 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	YPR027C	Q12079	277 aa		7.19	□□□□□ -1.26
MSC3	YLR219W	SNF1	P06782	633 aa	Known RBP	7.18	□□□□□ -1.26
MSC3	YLR219W	HXT1	P32465	570 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	ERG11	P10614	530 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	PET123	P17558	318 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	BIO2	P32451	375 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	YKL050C	P35736	922 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	MCX1	P38323	520 aa	Predicted RBP	7.18	□□□□□ -1.26
MSC3	YLR219W	BOP3	P53958	396 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	DAS2	Q12084	232 aa		7.18	□□□□□ -1.26
MSC3	YLR219W	CIT2	P08679	460 aa		7.17	□□□□□ -1.26
MSC3	YLR219W	APT1	P49435	187 aa	Known RBP	7.17	□□□□□ -1.26
MSC3	YLR219W	YGR021W	P53212	290 aa		7.17	□□□□□ -1.26
MSC3	YLR219W	STP1	Q00947	519 aa		7.17	□□□□□ -1.26
MSC3	YLR219W	RCR2	Q03446	210 aa	Known RBP	7.17	□□□□□ -1.26
MSC3	YLR219W	PKH2	Q12236	1081 aa	Known RBP	7.17	□□□□□ -1.26
MSC3	YLR219W	YLR422W	Q06409	1932 aa		7.17	□□□□□ -1.26
MSC3	YLR219W	RPS3	P05750	240 aa	Known RBP	7.16	□□□□□ -1.26
MSC3	YLR219W	ADK2	P26364	225 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	EFB1	P32471	206 aa	Known RBP	7.16	□□□□□ -1.26
MSC3	YLR219W	RRN6	P32786	894 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	TBS1	P38114	1094 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	TCD1	P38756	429 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	YTA12	P40341	825 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	POL31	P46957	487 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	PUS2	P53167	370 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	SPP1	Q03012	353 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	SKY1	Q03656	742 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	YDR222W	Q04925	415 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	ESC8	Q08119	714 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	REC8	Q12188	680 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	SEC21	P32074	935 aa	Known RBP	7.16	□□□□□ -1.26
MSC3	YLR219W	CAJ1	P39101	391 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	XDJ1	P39102	459 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	YGL036W	P53185	909 aa	Predicted RBP	7.16	□□□□□ -1.26
MSC3	YLR219W	SPC98	P53540	846 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	7.16	□□□□□ -1.26	not detected
MSC3	YLR219W	SYH1	Q02875	849 aa	Known RBP	7.16	□□□□□ -1.26
MSC3	YLR219W	DIG1	Q03063	452 aa	Known RBP	7.16	□□□□□ -1.26
MSC3	YLR219W	NGL3	Q03210	505 aa		7.16	□□□□□ -1.26
MSC3	YLR219W	BI2	P03873	423 aa		7.15	□□□□□ -1.26
MSC3	YLR219W	BI4	P03879	638 aa		7.15	□□□□□ -1.26
MSC3	YLR219W	TPK1	P06244	397 aa		7.15	□□□□□ -1.26
MSC3	YLR219W	MSD1	P15179	658 aa	Known RBP	7.15	□□□□□ -1.26
MSC3	YLR219W	MRPL7	P36519	292 aa		7.15	□□□□□ -1.26
MSC3	YLR219W	JHD1	P40034	492 aa		7.15	□□□□□ -1.26
MSC3	YLR219W	ASG7	P46993	209 aa		7.15	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms