RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YBR284WP38150 797 aa4.22□□□□□ -1.73
CMS1YLR003C HRB1P38922 454 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
CMS1YLR003C ECM1P39715 212 aa4.22□□□□□ -1.73
CMS1YLR003C MTR3P48240 250 aaPredicted RBP4.22□□□□□ -1.73
CMS1YLR003C CIR2Q08822 631 aa4.22□□□□□ -1.73
CMS1YLR003C PHR1P05066 565 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74not detected
CMS1YLR003C YCL002CP25565 263 aa4.21□□□□□ -1.74
CMS1YLR003C MVD1P32377 396 aaKnown RBP4.21□□□□□ -1.74
CMS1YLR003C PET10P36139 283 aa4.21□□□□□ -1.74
CMS1YLR003C TAD1P53065 400 aa4.21□□□□□ -1.74
CMS1YLR003C FHN1P53279 174 aa4.21□□□□□ -1.74
CMS1YLR003C LRS4Q04087 347 aaKnown RBP4.21□□□□□ -1.74
CMS1YLR003C NUP1P20676 1076 aa4.2□□□□□ -1.74
CMS1YLR003C STE5P32917 917 aa4.2□□□□□ -1.74
CMS1YLR003C FMO1P38866 432 aa4.2□□□□□ -1.74
CMS1YLR003C PFD1P46988 109 aa4.19□□□□□ -1.74
CMS1YLR003C MTL1P53214 551 aa4.19□□□□□ -1.74
CMS1YLR003C CTK1Q03957 528 aaKnown RBP4.19□□□□□ -1.74
CMS1YLR003C MSD1P15179 658 aaKnown RBP4.18□□□□□ -1.74
CMS1YLR003C PHO11P35842 467 aa4.18□□□□□ -1.74
CMS1YLR003C PHO12P38693 467 aa4.18□□□□□ -1.74
CMS1YLR003C SET5P38890 526 aaKnown RBP4.18□□□□□ -1.74
CMS1YLR003C MEP2P41948 499 aa4.18□□□□□ -1.74
CMS1YLR003C ALR2P43553 858 aa4.18□□□□□ -1.74
CMS1YLR003C RPA135P22138 1203 aaKnown RBP4.17□□□□□ -1.74
CMS1YLR003C YBR184WP38299 523 aa4.17□□□□□ -1.74
CMS1YLR003C NUP60P39705 539 aa4.17□□□□□ -1.74
CMS1YLR003C VAC8P39968 578 aa4.17□□□□□ -1.74
CMS1YLR003C YBP2P53169 641 aa4.17□□□□□ -1.74
CMS1YLR003C ALD6P54115 500 aaKnown RBP4.17□□□□□ -1.74
CMS1YLR003C FMP30Q02883 468 aa4.17□□□□□ -1.74
CMS1YLR003C LYS9P38999 446 aa4.16□□□□□ -1.74
CMS1YLR003C RSP5P39940 809 aaKnown RBP4.16□□□□□ -1.74
CMS1YLR003C SPF1P39986 1215 aaKnown RBP4.16□□□□□ -1.74
CMS1YLR003C UTP8P53276 713 aaKnown RBP4.16□□□□□ -1.74
CMS1YLR003C MLH3Q12083 715 aa4.16□□□□□ -1.74
CMS1YLR003C APN1P22936 367 aa4.15□□□□□ -1.75
CMS1YLR003C FUB1P25659 250 aa4.15□□□□□ -1.75
CMS1YLR003C EMC3P36039 253 aa4.15□□□□□ -1.75
CMS1YLR003C GMH1P36125 273 aa4.15□□□□□ -1.75
CMS1YLR003C HBN1Q96VH4 193 aa4.15□□□□□ -1.75
CMS1YLR003C PRP31P49704 494 aaPredicted RBP4.14□□□□□ -1.75
CMS1YLR003C ZIP2P53061 704 aa4.14□□□□□ -1.75
CMS1YLR003C THR1P17423 357 aaKnown RBP4.13□□□□□ -1.75
CMS1YLR003C KCC4P25389 1037 aa4.13□□□□□ -1.75
CMS1YLR003C YPL068CQ02749 293 aa4.13□□□□□ -1.75
CMS1YLR003C TDA5Q06417 326 aaKnown RBP4.13□□□□□ -1.75
CMS1YLR003C REH1Q06709 432 aa4.13□□□□□ -1.75
CMS1YLR003C FMP25Q08023 583 aa4.13□□□□□ -1.75
CMS1YLR003C USV1Q12132 391 aa4.13□□□□□ -1.75
CMS1YLR003C SHR5P41912 237 aa4.12□□□□□ -1.75
CMS1YLR003C CLF1Q12309 687 aaPredicted RBP4.12□□□□□ -1.75
CMS1YLR003C YBR182C-AQ8TGU6 64 aa4.12□□□□□ -1.75
CMS1YLR003C ADE5,7P07244 802 aaKnown RBP4.11□□□□□ -1.75
CMS1YLR003C STE4P18851 423 aa4.11□□□□□ -1.75
CMS1YLR003C SAT4P25333 603 aaKnown RBP4.11□□□□□ -1.75
CMS1YLR003C TRZ1P36159 838 aaPredicted RBP4.11□□□□□ -1.75
CMS1YLR003C YHR112CP38716 378 aa4.11□□□□□ -1.75
CMS1YLR003C YGR283CP53336 341 aaPredicted RBP4.11□□□□□ -1.75
CMS1YLR003C UBX5Q06682 500 aa4.11□□□□□ -1.75
CMS1YLR003C GEP3Q08622 556 aa4.11□□□□□ -1.75
CMS1YLR003C ZRT2Q12436 422 aa4.11□□□□□ -1.75
CMS1YLR003C STE12P13574 688 aa4.1□□□□□ -1.75
CMS1YLR003C ADE2P21264 571 aaKnown RBP4.1□□□□□ -1.75
CMS1YLR003C APL2P36000 726 aaPredicted RBP4.1□□□□□ -1.75
CMS1YLR003C GYP8P43570 497 aa4.1□□□□□ -1.75
CMS1YLR003C STP1Q00947 519 aa4.1□□□□□ -1.75
CMS1YLR003C UGP1P32861 499 aaKnown RBP4.09□□□□□ -1.75
CMS1YLR003C SET3P36124 751 aa4.09□□□□□ -1.75
CMS1YLR003C ULP2P40537 1034 aaPredicted RBP4.09□□□□□ -1.75
CMS1YLR003C ZDS1P50111 915 aaKnown RBP4.09□□□□□ -1.75
CMS1YLR003C YDR514CQ04408 483 aa4.09□□□□□ -1.75
CMS1YLR003C EAF1Q06337 982 aa4.09□□□□□ -1.75
CMS1YLR003C MBR1P23493 339 aa4.08□□□□□ -1.76
CMS1YLR003C YMC1P32331 307 aa4.08□□□□□ -1.76
CMS1YLR003C APT2P36973 181 aa4.08□□□□□ -1.76
CMS1YLR003C YMC2P38087 329 aa4.08□□□□□ -1.76
CMS1YLR003C RLP7P40693 322 aaKnown RBP4.08□□□□□ -1.76
CMS1YLR003C UBP6P43593 499 aaKnown RBP4.08□□□□□ -1.76
CMS1YLR003C TAX4P47030 604 aa4.08□□□□□ -1.76
CMS1YLR003C SPC98P53540 846 aa4.08□□□□□ -1.76
CMS1YLR003C ARG5,6Q01217 863 aa4.08□□□□□ -1.76
CMS1YLR003C SVF1Q05515 481 aa4.08□□□□□ -1.76
CMS1YLR003C RGC1Q06108 1083 aaKnown RBP4.08□□□□□ -1.76
CMS1YLR003C HRP1Q99383 534 aaKnown RBP4.08□□□□□ -1.76
CMS1YLR003C DIF1O13577 133 aa4.07□□□□□ -1.76
CMS1YLR003C PMC1P38929 1173 aaPredicted RBP4.07□□□□□ -1.76
CMS1YLR003C CCT5P40413 562 aaKnown RBP4.07□□□□□ -1.76
CMS1YLR003C ERP6P53198 216 aa4.07□□□□□ -1.76
CMS1YLR003C HFD1Q04458 532 aa4.07□□□□□ -1.76
CMS1YLR003C MCM21Q06675 368 aa4.07□□□□□ -1.76
CMS1YLR003C CRP1P38845 465 aaKnown RBP4.06□□□□□ -1.76
CMS1YLR003C ERG6P25087 383 aaKnown RBP4.05□□□□□ -1.76
CMS1YLR003C RPL8BP29453 256 aaKnown RBP4.05□□□□□ -1.76
CMS1YLR003C PSA1P41940 361 aaKnown RBP4.05□□□□□ -1.76
CMS1YLR003C YGR151CP53287 111 aa4.05□□□□□ -1.76
CMS1YLR003C SPO75Q07798 868 aa4.05□□□□□ -1.76
CMS1YLR003C ULA1Q12059 462 aa4.05□□□□□ -1.76
CMS1YLR003C SSF2Q12153 453 aaPredicted RBP4.05□□□□□ -1.76
CMS1YLR003C ABF1P14164 731 aa4.04□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms