RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	POL31	P46957	487 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
LOS1	YKL205W	AZR1	P50080	613 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	ORC5	P50874	479 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	YNL247W	P53852	767 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	YML119W	Q03208	357 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	MSH6	Q03834	1242 aa		4.2	□□□□□ -1.74
LOS1	YKL205W	UTP5	Q04177	643 aa	Known RBP	4.2	□□□□□ -1.74
LOS1	YKL205W	YER152C	P10356	443 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	KIP2	P28743	706 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	SMC2	P38989	1170 aa	Known RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	PSF2	P40359	213 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	FYV8	P46949	817 aa	Known RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	YLR455W	Q06188	304 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	DNL4	Q08387	944 aa	Predicted RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	NUR1	Q12066	484 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	YLL058W	Q12198	575 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	MAS2	P11914	482 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	MUD2	P36084	527 aa	Known RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	SAP190	P36123	1033 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	YAP5	P40574	245 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	RPS7B	P48164	190 aa	Known RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	MUK1	Q02866	612 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	IWR1	Q07532	353 aa	Predicted RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	DIS3	Q08162	1001 aa	Known RBP	4.19	□□□□□ -1.74
LOS1	YKL205W	YOL075C	Q08234	1294 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
LOS1	YKL205W	CTF3	Q12748	733 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	YDR524C-B	Q3E6R4	66 aa		4.19	□□□□□ -1.74
LOS1	YKL205W	GAL80	P04387	435 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	ERG11	P10614	530 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	MSD1	P15179	658 aa	Known RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	SWI3	P32591	825 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	BLI1	P35727	113 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	UIP5	P36137	443 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	NOP4	P37838	685 aa	Known RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	LDH1	P38139	375 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	ORC6	P38826	435 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	CPR7	P47103	393 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	YJR039W	P47107	1121 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	PSP2	P50109	593 aa	Known RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	MND1	P53102	219 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	ATG1	P53104	897 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	YMR187C	Q03236	431 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	VAC14	Q06708	880 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	MIS1	P09440	975 aa	Known RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	CDC15	P27636	974 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	PTC4	P38089	393 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	ASG1	P40467	964 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	RSC8	P43609	557 aa	Known RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	YPR003C	P53394	754 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	IPI3	P53877	555 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	TDA9	Q04545	1251 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	APM4	Q99186	491 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	RGR1	P19263	1082 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	SAT4	P25333	603 aa	Known RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	RAM2	P29703	316 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	PSY2	P40164	858 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	ESL1	P40456	1118 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	YGR111W	P53265	400 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	CLP1	Q08685	445 aa	Predicted RBP	4.18	□□□□□ -1.74
LOS1	YKL205W	OXR1	Q08952	273 aa		4.18	□□□□□ -1.74
LOS1	YKL205W	CDC37	P06101	506 aa	Known RBP	4.17	□□□□□ -1.74
LOS1	YKL205W	SWI6	P09959	803 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	MSH2	P25847	964 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	NFU1	P32860	256 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	ABZ1	P37254	787 aa	Predicted RBP	4.17	□□□□□ -1.74
LOS1	YKL205W	ECM13	P38195	257 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	MAD1	P40957	749 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	SNZ3	P43545	298 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	RIP-Chip
LOS1	YKL205W	SNZ2	P53824	298 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	CEG1	Q01159	459 aa	Predicted RBP	4.17	□□□□□ -1.74
LOS1	YKL205W	GPI13	Q07830	1017 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	TRE1	Q08919	783 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	TUB3	P09734	445 aa	Known RBP	4.17	□□□□□ -1.74
LOS1	YKL205W	IDI1	P15496	288 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	SPO12	P17123	173 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	CDC11	P32458	415 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	TYE7	P33122	291 aa	Predicted RBP	4.17	□□□□□ -1.74
LOS1	YKL205W	ATG19	P35193	415 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	MSC7	P38694	644 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	PEX31	P53203	462 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	YNL034W	P53963	612 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	YNL018C	P53976	612 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	ECI1	Q05871	280 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	YOL019W	Q08157	551 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	FLC1	Q08967	793 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	APL4	Q12028	832 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	GPM3	Q12326	303 aa		4.17	□□□□□ -1.74
LOS1	YKL205W	RPS6A	P0CX37	236 aa	Known RBP	4.16	□□□□□ -1.74
LOS1	YKL205W	RPS6B	P0CX38	236 aa	Predicted RBP	4.16	□□□□□ -1.74
LOS1	YKL205W	PMS1	P14242	873 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	SWC5	P38326	303 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	SPC72	P39723	622 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	LAM5	P43560	674 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	TOF1	P53840	1238 aa		4.16	□□□□□ -1.74
LOS1	YKL205W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	RIP-Chip
LOS1	YKL205W	HEL2	Q05580	639 aa	Known RBP	4.16	□□□□□ -1.74
LOS1	YKL205W	MCM16	Q12262	181 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms