RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	TCP1	P12612	559 aa	Known RBP	7.04	□□□□□ -1.28
MIA40	YKL195W	CHS2	P14180	963 aa		7.04	□□□□□ -1.28
MIA40	YKL195W	PRP22	P24384	1145 aa	Known RBP	7.04	□□□□□ -1.28
MIA40	YKL195W	PUP1	P25043	261 aa		7.04	□□□□□ -1.28
MIA40	YKL195W	CNS1	P33313	385 aa		7.04	□□□□□ -1.28
MIA40	YKL195W	YKL023W	P36103	277 aa	Known RBP	7.04	□□□□□ -1.28
MIA40	YKL195W	PGM2	P37012	569 aa	Known RBP	7.04	□□□□□ -1.28
MIA40	YKL195W	CWC22	P53333	577 aa	Known RBP	7.04	□□□□□ -1.28
MIA40	YKL195W	UBX5	Q06682	500 aa		7.04	□□□□□ -1.28
MIA40	YKL195W	FAL1	Q12099	399 aa	Known RBP	7.04	□□□□□ -1.28
MIA40	YKL195W	YKL068W-A	Q3E826	78 aa		7.04	□□□□□ -1.28
MIA40	YKL195W	YLR278C	Q05854	1341 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	SWI5	P08153	709 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	VMA2	P16140	517 aa	Known RBP	7.03	□□□□□ -1.28
MIA40	YKL195W	PHO87	P25360	923 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	HXT1	P32465	570 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	NFU1	P32860	256 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	VPS35	P34110	944 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	YEL1	P34225	687 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	MCD4	P36051	919 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	MCR1	P36060	302 aa	Known RBP	7.03	□□□□□ -1.28
MIA40	YKL195W	SET5	P38890	526 aa	Known RBP	7.03	□□□□□ -1.28
MIA40	YKL195W	PEA2	P40091	420 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	HXT8	P40886	569 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	MAD1	P40957	749 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	ARK1	P53974	638 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	PTA1	Q01329	785 aa	Predicted RBP	7.03	□□□□□ -1.28
MIA40	YKL195W	CUR1	Q06469	252 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	RLP24	Q07915	199 aa	Known RBP	7.03	□□□□□ -1.28
MIA40	YKL195W	TSC13	Q99190	310 aa		7.03	□□□□□ -1.28
MIA40	YKL195W	QCR6	P00127	147 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	GFA1	P14742	717 aa	Known RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	PAP1	P29468	568 aa	Known RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	UTR4	P32626	227 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	SHP1	P34223	423 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	SDS3	P40505	327 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	TAD1	P53065	400 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	YGL039W	P53183	348 aa	Known RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	YGR021W	P53212	290 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	JJJ1	P53863	590 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	YAF9	P53930	226 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	TIM8	P57744	87 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	UTP14	Q04500	899 aa	Known RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	YML083C	Q04526	418 aa		7.02	□□□□□ -1.29
MIA40	YKL195W	DUS3	Q06053	668 aa	Known RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	ISA1	Q07821	250 aa	Predicted RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	NOC3	Q07896	663 aa	Predicted RBP	7.02	□□□□□ -1.29
MIA40	YKL195W	CDC8	P00572	216 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	SSA4	P22202	642 aa	Known RBP	7.01	□□□□□ -1.29
MIA40	YKL195W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.01	□□□□□ -1.29	not detected
MIA40	YKL195W	YSC83	P32792	385 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	OLA1	P38219	394 aa	Known RBP	7.01	□□□□□ -1.29
MIA40	YKL195W	PNT1	P38969	423 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	HMF1	P40037	129 aa	Known RBP	7.01	□□□□□ -1.29
MIA40	YKL195W	LCB2	P40970	561 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	SUM1	P46676	1062 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	VPS53	P47061	822 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	KAP114	P53067	1004 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	ENV11	P53246	860 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	BTN2	P53286	410 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	POB3	Q04636	552 aa	Known RBP	7.01	□□□□□ -1.29
MIA40	YKL195W	CSR1	Q06705	408 aa	Known RBP	7.01	□□□□□ -1.29
MIA40	YKL195W	SMC5	Q08204	1093 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	NUR1	Q12066	484 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	RUD3	Q12234	484 aa	Known RBP	7.01	□□□□□ -1.29
MIA40	YKL195W	ZRT2	Q12436	422 aa		7.01	□□□□□ -1.29
MIA40	YKL195W	NAM7	P30771	971 aa	Known RBP	7	□□□□□ -1.29
MIA40	YKL195W	AHP1	P38013	176 aa	Known RBP	7	□□□□□ -1.29
MIA40	YKL195W	RRT6	P53117	311 aa	Predicted RBP	7	□□□□□ -1.29
MIA40	YKL195W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7	□□□□□ -1.29	not detected
MIA40	YKL195W	SIL1	Q08199	421 aa		7	□□□□□ -1.29
MIA40	YKL195W	NOB1	Q08444	459 aa	Known RBP	7	□□□□□ -1.29
MIA40	YKL195W	TRP2	P00899	507 aa	Known RBP	6.99	□□□□□ -1.29
MIA40	YKL195W	DIT1	P21623	536 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	MUD1	P32605	298 aa	Known RBP	6.99	□□□□□ -1.29
MIA40	YKL195W	BLI1	P35727	113 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	YKL050C	P35736	922 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	MUD2	P36084	527 aa	Known RBP	6.99	□□□□□ -1.29
MIA40	YKL195W	TVP38	P36164	337 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	REG2	P38232	338 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	ERC1	P38767	581 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	CEM1	P39525	442 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	GPB2	P39717	880 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	SAP1	P39955	897 aa	Known RBP	6.99	□□□□□ -1.29
MIA40	YKL195W	PSY2	P40164	858 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	CTR1	P49573	406 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	ROM1	P53046	1155 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	ESBP6	P53918	673 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	SLD5	Q03406	294 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	VTI1	Q04338	217 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	YMR018W	Q04364	514 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	DON1	Q05610	365 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	NOP6	Q07623	225 aa	Known RBP	6.99	□□□□□ -1.29
MIA40	YKL195W	APL5	Q08951	932 aa	Known RBP	6.99	□□□□□ -1.29
MIA40	YKL195W	OSW2	Q12202	724 aa		6.99	□□□□□ -1.29
MIA40	YKL195W	SNF1	P06782	633 aa	Known RBP	6.98	□□□□□ -1.29
MIA40	YKL195W	SSA1	P10591	642 aa	Known RBP	6.98	□□□□□ -1.29
MIA40	YKL195W	ERG11	P10614	530 aa		6.98	□□□□□ -1.29
MIA40	YKL195W	HAP4	P14064	554 aa		6.98	□□□□□ -1.29
MIA40	YKL195W	TKL1	P23254	680 aa	Known RBP	6.98	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms