RNA–Protein interactions for RNA: YKL113C

RAD27, Transcript of 5' to 3' exonuclease, 5' flap endonuclease, yeast

Gene RAD27, Length 1,149 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD27	YKL113C	PRP22	P24384	1145 aa	Known RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	PER1	P25625	357 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	GCG1	P32656	232 aa	Known RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	TGL1	P34163	548 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	UBP11	P36026	717 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	PGM2	P37012	569 aa	Known RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	UBP13	P38187	747 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	TDA3	P38758	523 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	NDT80	P38830	627 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	SET5	P38890	526 aa	Known RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	ACA1	P39970	489 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	FAF1	P40546	346 aa	Predicted RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	CTK3	P46963	296 aa	Predicted RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	COS5	P47187	383 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	TAD1	P53065	400 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	DIP5	P53388	608 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	PHM6	Q05637	104 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	YLR297W	Q05899	129 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	UTP13	Q05946	817 aa	Known RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	JIP5	Q06214	492 aa	Predicted RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	RSC2	Q06488	889 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	YPR078C	Q06813	372 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	SGT2	Q12118	346 aa	Known RBP	4.59	□□□□□ -1.67
RAD27	YKL113C	GLE1	Q12315	538 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	ERP4	Q12450	207 aa		4.59	□□□□□ -1.67
RAD27	YKL113C	ERG11	P10614	530 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	CLN1	P20437	546 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	SUV3	P32580	737 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	PHO88	P38264	188 aa	Predicted RBP	4.58	□□□□□ -1.68
RAD27	YKL113C	OCA5	P38738	679 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	FIS1	P40515	155 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	ULP2	P40537	1034 aa	Predicted RBP	4.58	□□□□□ -1.68
RAD27	YKL113C	MAD1	P40957	749 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	YGR021W	P53212	290 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	YNL247W	P53852	767 aa	Known RBP	4.58	□□□□□ -1.68
RAD27	YKL113C	ESBP6	P53918	673 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	ARK1	P53974	638 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	PTA1	Q01329	785 aa	Predicted RBP	4.58	□□□□□ -1.68
RAD27	YKL113C	VTI1	Q04338	217 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	SPH1	Q06160	661 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	ATG23	Q06671	453 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	ISA1	Q07821	250 aa	Predicted RBP	4.58	□□□□□ -1.68
RAD27	YKL113C	FRA1	Q07825	749 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	YOR389W	Q08912	624 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	CSR2	Q12734	1121 aa		4.58	□□□□□ -1.68
RAD27	YKL113C	PGK1	P00560	416 aa	Known RBP	4.57	□□□□□ -1.68
RAD27	YKL113C	CDC8	P00572	216 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	TRP2	P00899	507 aa	Known RBP	4.57	□□□□□ -1.68
RAD27	YKL113C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
RAD27	YKL113C	SWI6	P09959	803 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	PHO8	P11491	566 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	PAP1	P29468	568 aa	Known RBP	4.57	□□□□□ -1.68
RAD27	YKL113C	STE5	P32917	917 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	XRS2	P33301	854 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	NIP100	P33420	868 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	SLD2	P34252	453 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	TGL4	P36165	910 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	ACO2	P39533	789 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	RPN3	P40016	523 aa	Known RBP	4.57	□□□□□ -1.68
RAD27	YKL113C	LCB2	P40970	561 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	FET4	P40988	552 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	MMM1	P41800	426 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	KAP114	P53067	1004 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	HUL5	P53119	910 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	TOF1	P53840	1238 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	YML037C	Q03703	340 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	GYL1	Q04322	720 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	YMR114C	Q04471	368 aa	Known RBP	4.57	□□□□□ -1.68
RAD27	YKL113C	ERV41	Q04651	352 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	CSR1	Q06705	408 aa	Known RBP	4.57	□□□□□ -1.68
RAD27	YKL113C	YLR001C	Q07895	862 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	APC5	Q08683	685 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	NFI1	Q12216	726 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	SRF1	Q12516	437 aa		4.57	□□□□□ -1.68
RAD27	YKL113C	FBP1	P09201	348 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	TCP1	P12612	559 aa	Known RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	NAM7	P30771	971 aa	Known RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	CDC3	P32457	520 aa	Known RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	YSC83	P32792	385 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	YEL1	P34225	687 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	MCR1	P36060	302 aa	Known RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	LAS1	P36146	502 aa	Predicted RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	JNM1	P36224	373 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	VPS41	P38959	992 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	PXA1	P41909	870 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	MIC19	P43594	170 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	BFA1	P47113	574 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	SGM1	P47166	707 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	ZPR1	P53303	486 aa	Known RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	NCS2	P53923	493 aa	Predicted RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
RAD27	YKL113C	EEB1	Q02891	456 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	UTP14	Q04500	899 aa	Known RBP	4.56	□□□□□ -1.68
RAD27	YKL113C	DON1	Q05610	365 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	ECI1	Q05871	280 aa		4.56	□□□□□ -1.68
RAD27	YKL113C	YLR278C	Q05854	1341 aa		4.55	□□□□□ -1.68
RAD27	YKL113C	SNF1	P06782	633 aa	Known RBP	4.55	□□□□□ -1.68
RAD27	YKL113C	CHS2	P14180	963 aa		4.55	□□□□□ -1.68
RAD27	YKL113C	GFA1	P14742	717 aa	Known RBP	4.55	□□□□□ -1.68
RAD27	YKL113C	DBP5	P20449	482 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms