RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	HXT6	P39003	570 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	HXT7	P39004	570 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	NOP16	P40007	231 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	UTP22	P53254	1237 aa	Predicted RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	ORC3	P54790	616 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	ERO1	Q03103	563 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	NHX1	Q04121	633 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	HIM1	Q06674	414 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	IRC3	Q06683	689 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	NBA1	Q08229	501 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	APM4	Q99186	491 aa		4.94	□□□□□ -1.62
TFA1	YKL028W	RPS21A	P0C0V8	87 aa	Known RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	MSH1	P25846	959 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	ECM32	P32644	1121 aa	Known RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	ARL1	P38116	183 aa	Known RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	ATG14	P38270	344 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	CAJ1	P39101	391 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	CCM1	P48237	864 aa	Predicted RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	YGR016W	P53209	190 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	TEP1	P53916	434 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	PTA1	Q01329	785 aa	Predicted RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	SRP1	Q02821	542 aa	Known RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	HLR1	Q04429	423 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	GSF2	Q04697	403 aa	Known RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	SGD1	Q06132	899 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	ENV7	Q12003	364 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	HFI1	Q12060	488 aa		4.93	□□□□□ -1.62
TFA1	YKL028W	LPX1	Q12405	387 aa	Known RBP	4.93	□□□□□ -1.62
TFA1	YKL028W	CYB2	P00175	591 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	BI4	P03879	638 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	PRP6	P19735	899 aa	Predicted RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	HOP1	P20050	605 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	PER1	P25625	357 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	FUN30	P31380	1131 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	VPH1	P32563	840 aa	Known RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	PAH1	P32567	862 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	MUD2	P36084	527 aa	Known RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	SHM2	P37291	469 aa	Known RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	FLR1	P38124	548 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	PES4	P39684	611 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	GPD2	P41911	440 aa	Known RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	UPF3	P48412	387 aa	Known RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	SSY1	Q03770	852 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	YDR514C	Q04408	483 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	PSR1	Q07800	427 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	TRE1	Q08919	783 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	ALG6	Q12001	544 aa	Known RBP	4.92	□□□□□ -1.62
TFA1	YKL028W	YVC1	Q12324	675 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	PTC5	Q12511	572 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	ENT1	Q12518	454 aa		4.92	□□□□□ -1.62
TFA1	YKL028W	TPM1	P17536	199 aa	Known RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	AAC3	P18238	307 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	HCA4	P20448	770 aa	Known RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	MIH1	P23748	554 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	NPP1	P25353	742 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	KRR1	P25586	316 aa	Predicted RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	CMK1	P27466	446 aa	Known RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	SAS3	P34218	831 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	UBS1	P38290	277 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	KAP123	P40069	1113 aa	Known RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	ASK10	P48361	1146 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	NIT3	P49954	291 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	TAD1	P53065	400 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	RBG2	P53295	368 aa	Known RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	MOT3	P54785	490 aa	Known RBP	4.91	□□□□□ -1.62
TFA1	YKL028W	MEC3	Q02574	474 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	YHM2	Q04013	314 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	YLR287C	Q05881	355 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	KCS1	Q12494	1050 aa		4.91	□□□□□ -1.62
TFA1	YKL028W	RPL11A	P0C0W9	174 aa	Known RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	DBP2	P24783	546 aa	Known RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	PGS1	P25578	521 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	RAD16	P31244	790 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	PRO1	P32264	428 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	XRS2	P33301	854 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	DHR2	P36009	735 aa	Predicted RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	OAF3	P36023	863 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	ABZ1	P37254	787 aa	Predicted RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	RPN10	P38886	268 aa	Known RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	PEX7	P39108	375 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	HOS2	P53096	452 aa	Predicted RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	YAP1802	P53309	568 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	NSE5	Q03718	556 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	ARA2	Q04212	335 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	TDA9	Q04545	1251 aa		4.9	□□□□□ -1.62
TFA1	YKL028W	RPL11B	Q3E757	174 aa	Predicted RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	HSH49	Q99181	213 aa	Predicted RBP	4.9	□□□□□ -1.62
TFA1	YKL028W	SPT7	P35177	1332 aa		4.9	□□□□□ -1.63
TFA1	YKL028W	SPO16	P17122	198 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	FUR1	P18562	216 aa	Known RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	BRF1	P29056	596 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	SLC1	P33333	303 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	REI1	P38344	393 aa	Predicted RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	SMK1	P41808	388 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	VPS53	P47061	822 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	BNA2	P47125	453 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	RNR4	P49723	345 aa	Known RBP	4.89	□□□□□ -1.63
TFA1	YKL028W	ZIP2	P53061	704 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	ENV11	P53246	860 aa		4.89	□□□□□ -1.63
TFA1	YKL028W	ARC35	P53731	342 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms