RNA–Protein interactions for RNA: YIR006C

PAN1, Transcript of Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p, yeast

Gene PAN1, Length 4,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAN1	YIR006C	DAL7	P21826	554 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	SPO11	P23179	398 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	KRE2	P27809	442 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	ICL1	P28240	557 aa	Predicted RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	PLC1	P32383	869 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	VAB2	P40003	282 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	TAF6	P53040	516 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	YGR111W	P53265	400 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	YNL247W	P53852	767 aa	Known RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	ASI1	P54074	624 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	TMA20	P89886	181 aa	Predicted RBP	4.88	□□□□□ -1.63
PAN1	YIR006C	ULA1	Q12059	462 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	GNT1	Q12096	491 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	YLR125W	Q12138	136 aa		4.88	□□□□□ -1.63
PAN1	YIR006C	COX6	P00427	148 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	PKC1	P24583	1151 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	PUP2	P32379	260 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	SSP120	P39931	234 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	YRB1	P41920	201 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	YJR039W	P47107	1121 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	PTK2	P47116	818 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	HFM1	P51979	1187 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	MRM2	P53123	320 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	SUB2	Q07478	446 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	IWR1	Q07532	353 aa	Predicted RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	PCL8	Q08966	492 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	YRR1	Q12172	810 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	NUC1	P08466	329 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	KRS1	P15180	591 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	CLN2	P20438	545 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	MRS6	P32864	603 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	SMY2	P32909	740 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	SHE3	P38272	425 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	YHR078W	P38799	552 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	MET18	P40469	1032 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	HLJ1	P48353	224 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	RET3	P53600	189 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	YPL109C	Q02981	657 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	RRP15	Q06511	250 aa	Predicted RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	RLP24	Q07915	199 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	THI20	Q08224	551 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	AEP2	P22136	580 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	NCL1	P38205	684 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	PCM1	P38628	557 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	CRP1	P38845	465 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	ATG32	P40458	529 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	YFR006W	P43590	535 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	YJR008W	P47085	338 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	RBL2	P48606	106 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	SQS1	P53866	767 aa	Known RBP	4.87	□□□□□ -1.63
PAN1	YIR006C	DON1	Q05610	365 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	FRT1	Q99332	602 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	SAC3	P46674	1301 aa		4.87	□□□□□ -1.63
PAN1	YIR006C	FOB1	O13329	566 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	SBP1	P10080	294 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	NMT1	P14743	455 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	ARG8	P18544	423 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	PTP3	P40048	928 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	NMD5	P46970	1048 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	NNF1	P47149	201 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	YOR223W	Q12015	292 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	PGK1	P00560	416 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
PAN1	YIR006C	SRM1	P21827	482 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	PAT1	P25644	796 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	COY1	P34237	679 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	HAL5	P38970	855 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	MRX1	P40050	688 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	MNN11	P46985	422 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	GLG2	P47011	380 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	COP1	P53622	1201 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	YMR010W	Q03687	405 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	MGR3	Q04472	501 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	PRM6	Q04705	352 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	PIG1	Q06216	648 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	ATG26	Q06321	1198 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	YER152C	P10356	443 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	MIP1	P15801	1254 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	DGR2	P32330	852 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	EFM4	P40516	257 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	SPR3	P41901	512 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	YGL138C	P53122	345 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	SOL4	P53315	255 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	HOT1	Q03213	719 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	ATG16	Q03818	150 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	HOS1	Q12214	470 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	CLB2	P24869	491 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	DOM34	P33309	386 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	TOM20	P35180	183 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	ASK1	P35734	292 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	NOP4	P37838	685 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	HSM3	P38348	480 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	GGA2	P38817	585 aa	Known RBP	4.86	□□□□□ -1.63
PAN1	YIR006C	BZZ1	P38822	633 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	ATG1	P53104	897 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	HDA1	P53973	706 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	VTC3	Q02725	835 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	TFB2	Q02939	513 aa		4.86	□□□□□ -1.63
PAN1	YIR006C	CBP1	P07252	654 aa		4.85	□□□□□ -1.63
PAN1	YIR006C	GPA2	P10823	449 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms