RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C SPR3P41901 512 aa8.14□□□□□ -1.11
SNP1YIL061C YNL320WP42840 284 aa8.14□□□□□ -1.11
SNP1YIL061C SCD6P45978 349 aaKnown RBP RIP-Chip data8.14□□□□□ -1.11not detected
SNP1YIL061C YJR039WP47107 1121 aa8.14□□□□□ -1.11
SNP1YIL061C JJJ3P47138 172 aa8.14□□□□□ -1.11
SNP1YIL061C PSP2P50109 593 aaKnown RBP8.14□□□□□ -1.11
SNP1YIL061C MNP1P53163 194 aaPredicted RBP8.14□□□□□ -1.11
SNP1YIL061C PUS2P53167 370 aa8.14□□□□□ -1.11
SNP1YIL061C MRS2Q01926 470 aa8.14□□□□□ -1.11
SNP1YIL061C TRS130Q03660 1102 aa8.14□□□□□ -1.11
SNP1YIL061C YDR278CQ05612 105 aa8.14□□□□□ -1.11
SNP1YIL061C CST9Q06032 482 aa8.14□□□□□ -1.11
SNP1YIL061C HFI1Q12060 488 aa8.14□□□□□ -1.11
SNP1YIL061C HIF1Q12373 385 aa8.14□□□□□ -1.11
SNP1YIL061C YDR461C-AQ2V2P7 80 aa8.14□□□□□ -1.11
SNP1YIL061C RAD1P06777 1100 aa8.13□□□□□ -1.11
SNP1YIL061C PRP9P19736 530 aaKnown RBP8.13□□□□□ -1.11
SNP1YIL061C DBF4P32325 704 aa8.13□□□□□ -1.11
SNP1YIL061C APE3P37302 537 aaKnown RBP8.13□□□□□ -1.11
SNP1YIL061C MMS4P38257 691 aa8.13□□□□□ -1.11
SNP1YIL061C VID24P38263 362 aa8.13□□□□□ -1.11
SNP1YIL061C PMC1P38929 1173 aaPredicted RBP8.13□□□□□ -1.11
SNP1YIL061C SAK1P38990 1142 aa8.13□□□□□ -1.11
SNP1YIL061C END3P39013 349 aa8.13□□□□□ -1.11
SNP1YIL061C MXR1P40029 184 aa8.13□□□□□ -1.11
SNP1YIL061C ASG1P40467 964 aa8.13□□□□□ -1.11
SNP1YIL061C RPL22BP56628 122 aaKnown RBP8.13□□□□□ -1.11
SNP1YIL061C STE20Q03497 939 aaKnown RBP8.13□□□□□ -1.11
SNP1YIL061C OMS1Q06668 471 aa8.13□□□□□ -1.11
SNP1YIL061C RUD3Q12234 484 aaKnown RBP8.13□□□□□ -1.11
SNP1YIL061C ADE3P07245 946 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C EST1P17214 699 aaPredicted RBP8.12□□□□□ -1.11
SNP1YIL061C RRN6P32786 894 aa8.12□□□□□ -1.11
SNP1YIL061C SMY2P32909 740 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C YBL055CP34220 418 aaPredicted RBP8.12□□□□□ -1.11
SNP1YIL061C MOT2P34909 587 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C SAP1P39955 897 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C KAP123P40069 1113 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C PXA1P41909 870 aa8.12□□□□□ -1.11
SNP1YIL061C NMD5P46970 1048 aa8.12□□□□□ -1.11
SNP1YIL061C YJR079WP47126 109 aa8.12□□□□□ -1.11
SNP1YIL061C DRN1P53255 507 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C YML020WQ03722 664 aa8.12□□□□□ -1.11
SNP1YIL061C YOR223WQ12015 292 aa8.12□□□□□ -1.11
SNP1YIL061C SGT2Q12118 346 aaKnown RBP8.12□□□□□ -1.11
SNP1YIL061C ECM3Q99252 613 aa8.12□□□□□ -1.11
SNP1YIL061C QCR6P00127 147 aa8.11□□□□□ -1.11
SNP1YIL061C BI2P03873 423 aa8.11□□□□□ -1.11
SNP1YIL061C BI4P03879 638 aa8.11□□□□□ -1.11
SNP1YIL061C POX1P13711 748 aa8.11□□□□□ -1.11
SNP1YIL061C SFL1P20134 766 aa8.11□□□□□ -1.11
SNP1YIL061C PRE10P21242 288 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SNP1YIL061C CBF2P32504 956 aa8.11□□□□□ -1.11
SNP1YIL061C FLR1P38124 548 aa8.11□□□□□ -1.11
SNP1YIL061C ACF4P47129 309 aa8.11□□□□□ -1.11
SNP1YIL061C ABP140Q08641 628 aaKnown RBP8.11□□□□□ -1.11
SNP1YIL061C BI3Q9ZZW7 517 aa8.11□□□□□ -1.11
SNP1YIL061C YER152CP10356 443 aa8.1□□□□□ -1.11
SNP1YIL061C PYC1P11154 1178 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C MAS2P11914 482 aa8.1□□□□□ -1.11
SNP1YIL061C RRT12P25381 491 aa8.1□□□□□ -1.11
SNP1YIL061C GCD6P32501 712 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C SKG6P32900 734 aaPredicted RBP8.1□□□□□ -1.11
SNP1YIL061C TIF5P38431 405 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C KSP1P38691 1029 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C SAH1P39954 449 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C AIM21P40563 679 aa8.1□□□□□ -1.11
SNP1YIL061C SBE2P42223 864 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C UTP6Q02354 440 aaKnown RBP8.1□□□□□ -1.11
SNP1YIL061C CEF1Q03654 590 aaPredicted RBP8.1□□□□□ -1.11
SNP1YIL061C SHS1Q07657 551 aa8.1□□□□□ -1.11
SNP1YIL061C MET7Q08645 548 aa8.1□□□□□ -1.11
SNP1YIL061C ASP3-2P0CX77 362 aa8.09□□□□□ -1.11
SNP1YIL061C ASP3-3P0CX78 362 aa8.09□□□□□ -1.11
SNP1YIL061C ASP3-4P0CX79 362 aa8.09□□□□□ -1.11
SNP1YIL061C ASP3-1P0CZ17 362 aa8.09□□□□□ -1.11
SNP1YIL061C PEP5P12868 1029 aa8.09□□□□□ -1.11
SNP1YIL061C ABD1P32783 436 aaPredicted RBP8.09□□□□□ -1.11
SNP1YIL061C RSC30P38781 883 aa8.09□□□□□ -1.11
SNP1YIL061C ZAP1P47043 880 aa8.09□□□□□ -1.11
SNP1YIL061C UFO1Q04511 668 aa8.09□□□□□ -1.11
SNP1YIL061C ZPS1Q12512 249 aa8.09□□□□□ -1.11
SNP1YIL061C COX4P04037 155 aa8.08□□□□□ -1.12
SNP1YIL061C ARG4P04076 463 aaPredicted RBP8.08□□□□□ -1.12
SNP1YIL061C ADH4P10127 382 aa8.08□□□□□ -1.12
SNP1YIL061C WHI2P12611 486 aa8.08□□□□□ -1.12
SNP1YIL061C PMS1P14242 873 aa8.08□□□□□ -1.12
SNP1YIL061C PLC1P32383 869 aa8.08□□□□□ -1.12
SNP1YIL061C ECM2P38241 364 aaKnown RBP8.08□□□□□ -1.12
SNP1YIL061C MSG5P38590 489 aa8.08□□□□□ -1.12
SNP1YIL061C RAD26P40352 1085 aa8.08□□□□□ -1.12
SNP1YIL061C SAP185P40856 1058 aa8.08□□□□□ -1.12
SNP1YIL061C ULI1P43604 169 aa8.08□□□□□ -1.12
SNP1YIL061C ATG1P53104 897 aa8.08□□□□□ -1.12
SNP1YIL061C CUS1Q02554 436 aaPredicted RBP8.08□□□□□ -1.12
SNP1YIL061C RPL4AP10664 362 aaKnown RBP8.07□□□□□ -1.12
SNP1YIL061C PDR1P12383 1068 aa8.07□□□□□ -1.12
SNP1YIL061C PUF4P25339 888 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
SNP1YIL061C DEP1P31385 405 aa8.07□□□□□ -1.12
SNP1YIL061C YME1P32795 747 aa8.07□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms