RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W CDD1Q06549 142 aa7.39□□□□□ -1.23
APE4YHR113W SGT2Q12118 346 aaKnown RBP7.39□□□□□ -1.23
APE4YHR113W PKH2Q12236 1081 aaKnown RBP7.39□□□□□ -1.23
APE4YHR113W SPT2P06843 333 aaPredicted RBP7.38□□□□□ -1.23
APE4YHR113W VPS3P23643 1011 aa7.38□□□□□ -1.23
APE4YHR113W EFB1P32471 206 aaKnown RBP7.38□□□□□ -1.23
APE4YHR113W RAD54P32863 898 aa7.38□□□□□ -1.23
APE4YHR113W EBP2P36049 427 aaKnown RBP7.38□□□□□ -1.23
APE4YHR113W JNM1P36224 373 aa7.38□□□□□ -1.23
APE4YHR113W PTC4P38089 393 aa7.38□□□□□ -1.23
APE4YHR113W SLX1P38324 304 aa7.38□□□□□ -1.23
APE4YHR113W SMC2P38989 1170 aaKnown RBP7.38□□□□□ -1.23
APE4YHR113W BUD16P39988 312 aa7.38□□□□□ -1.23
APE4YHR113W KAP123P40069 1113 aaKnown RBP7.38□□□□□ -1.23
APE4YHR113W OPT1P40897 799 aa7.38□□□□□ -1.23
APE4YHR113W DAS1P47005 663 aa7.38□□□□□ -1.23
APE4YHR113W ATF2P53296 535 aa7.38□□□□□ -1.23
APE4YHR113W EMI2Q04409 500 aaKnown RBP7.38□□□□□ -1.23
APE4YHR113W SDH5Q08230 162 aa7.38□□□□□ -1.23
APE4YHR113W PLP2Q12017 286 aa7.38□□□□□ -1.23
APE4YHR113W ATG9Q12142 997 aa7.38□□□□□ -1.23
APE4YHR113W GAL10P04397 699 aa7.37□□□□□ -1.23
APE4YHR113W DAL2P25335 343 aa7.37□□□□□ -1.23
APE4YHR113W KIP1P28742 1111 aa7.37□□□□□ -1.23
APE4YHR113W MPE1P35728 441 aaKnown RBP7.37□□□□□ -1.23
APE4YHR113W MRPL7P36519 292 aa7.37□□□□□ -1.23
APE4YHR113W YHR202WP38887 602 aa7.37□□□□□ -1.23
APE4YHR113W ALT1P52893 592 aa7.37□□□□□ -1.23
APE4YHR113W SPC98P53540 846 aa7.37□□□□□ -1.23
APE4YHR113W PNG1Q02890 363 aa7.37□□□□□ -1.23
APE4YHR113W APL4Q12028 832 aa7.37□□□□□ -1.23
APE4YHR113W CTF3Q12748 733 aa7.37□□□□□ -1.23
APE4YHR113W CDC33P07260 213 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W SPO12P17123 173 aa7.36□□□□□ -1.23
APE4YHR113W COX11P19516 300 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W VMA4P22203 233 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W SEC21P32074 935 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W PCM1P38628 557 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W GEM1P39722 662 aa7.36□□□□□ -1.23
APE4YHR113W ATG3P40344 310 aa7.36□□□□□ -1.23
APE4YHR113W MET13P53128 600 aa7.36□□□□□ -1.23
APE4YHR113W DRN1P53255 507 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W NOP13P53883 403 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
APE4YHR113W HEH2Q03281 663 aa7.36□□□□□ -1.23
APE4YHR113W HMI1Q12039 706 aa7.36□□□□□ -1.23
APE4YHR113W GIS3Q12418 502 aa7.36□□□□□ -1.23
APE4YHR113W YOL098CQ12496 1037 aa7.36□□□□□ -1.23
APE4YHR113W ECM3Q99252 613 aa7.36□□□□□ -1.23
APE4YHR113W TUP1P16649 713 aa7.36□□□□□ -1.23
APE4YHR113W CDC42P19073 191 aa7.36□□□□□ -1.23
APE4YHR113W UBP14P38237 781 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W SAH1P39954 449 aaKnown RBP7.36□□□□□ -1.23
APE4YHR113W FMP10P40098 244 aa7.36□□□□□ -1.23
APE4YHR113W SDS3P40505 327 aa7.36□□□□□ -1.23
APE4YHR113W MMM1P41800 426 aa7.36□□□□□ -1.23
APE4YHR113W YGR130CP53278 816 aa7.36□□□□□ -1.23
APE4YHR113W ESBP6P53918 673 aa7.36□□□□□ -1.23
APE4YHR113W STP1Q00947 519 aa7.36□□□□□ -1.23
APE4YHR113W SPP1Q03012 353 aa7.36□□□□□ -1.23
APE4YHR113W YCG1Q06680 1035 aa7.36□□□□□ -1.23
APE4YHR113W OPY2Q06810 360 aa7.36□□□□□ -1.23
APE4YHR113W YPR027CQ12079 277 aa7.36□□□□□ -1.23
APE4YHR113W MTF2P10849 440 aa7.35□□□□□ -1.23
APE4YHR113W CYC8P14922 966 aa7.35□□□□□ -1.23
APE4YHR113W KGD2P19262 463 aaPredicted RBP7.35□□□□□ -1.23
APE4YHR113W PDC6P26263 563 aaKnown RBP7.35□□□□□ -1.23
APE4YHR113W AGP2P38090 596 aa7.35□□□□□ -1.23
APE4YHR113W CBR1P38626 284 aaKnown RBP7.35□□□□□ -1.23
APE4YHR113W LAA1P39526 2014 aa7.35□□□□□ -1.23
APE4YHR113W SIP5P40210 489 aaKnown RBP7.35□□□□□ -1.23
APE4YHR113W FAF1P40546 346 aaPredicted RBP7.35□□□□□ -1.23
APE4YHR113W YJR054WP47114 497 aa7.35□□□□□ -1.23
APE4YHR113W STR2P47164 639 aa7.35□□□□□ -1.23
APE4YHR113W TAD1P53065 400 aa7.35□□□□□ -1.23
APE4YHR113W TIF35Q04067 274 aaKnown RBP7.35□□□□□ -1.23
APE4YHR113W UTP5Q04177 643 aaKnown RBP7.35□□□□□ -1.23
APE4YHR113W AI5_BETAQ9ZZX0 354 aa7.35□□□□□ -1.23
APE4YHR113W TAO3P40468 2376 aa7.34□□□□□ -1.23
APE4YHR113W GAL80P04387 435 aa7.34□□□□□ -1.23
APE4YHR113W HAP2P06774 265 aa7.34□□□□□ -1.23
APE4YHR113W PPR1P07272 904 aaPredicted RBP7.34□□□□□ -1.23
APE4YHR113W CYS3P31373 394 aaKnown RBP7.34□□□□□ -1.23
APE4YHR113W PEX2P32800 271 aa7.34□□□□□ -1.23
APE4YHR113W GYP6P32806 458 aa7.34□□□□□ -1.23
APE4YHR113W GCS1P35197 352 aa7.34□□□□□ -1.23
APE4YHR113W CSG2P35206 410 aa7.34□□□□□ -1.23
APE4YHR113W TRZ1P36159 838 aaPredicted RBP7.34□□□□□ -1.23
APE4YHR113W SHQ1P40486 507 aaPredicted RBP7.34□□□□□ -1.23
APE4YHR113W ERG5P54781 538 aa7.34□□□□□ -1.23
APE4YHR113W MUB1Q03162 620 aa7.34□□□□□ -1.23
APE4YHR113W PPM1Q04081 328 aa7.34□□□□□ -1.23
APE4YHR113W TSR1Q07381 788 aaKnown RBP7.34□□□□□ -1.23
APE4YHR113W MAS1P10507 462 aa7.33□□□□□ -1.24
APE4YHR113W RNR1P21524 888 aaKnown RBP7.33□□□□□ -1.24
APE4YHR113W SPC110P32380 944 aa7.33□□□□□ -1.24
APE4YHR113W RRN6P32786 894 aa7.33□□□□□ -1.24
APE4YHR113W SHE3P38272 425 aaKnown RBP7.33□□□□□ -1.24
APE4YHR113W EXO5P38289 585 aa7.33□□□□□ -1.24
APE4YHR113W DYS1P38791 387 aa7.33□□□□□ -1.24
APE4YHR113W YIR016WP40572 265 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms