RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSM1	YGR171C	VMS1	Q04311	632 aa	Known RBP	4.26	□□□□□ -1.73
MSM1	YGR171C	MPD2	Q99316	277 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	SOD2	P00447	233 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	CDC20	P26309	610 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	STE14	P32584	239 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	VPS24	P36095	224 aa	Known RBP	4.26	□□□□□ -1.73
MSM1	YGR171C	DID4	P36108	232 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	AIM3	P38266	947 aa	Known RBP	4.26	□□□□□ -1.73
MSM1	YGR171C	YNL034W	P53963	612 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	YNL018C	P53976	612 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	SWM1	Q12379	170 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	NPC2	Q12408	173 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	RMP1	Q12530	201 aa		4.26	□□□□□ -1.73
MSM1	YGR171C	SST2	P11972	698 aa	Known RBP	4.25	□□□□□ -1.73
MSM1	YGR171C	YEF3	P16521	1044 aa	Known RBP	4.25	□□□□□ -1.73
MSM1	YGR171C	MNN4	P36044	1178 aa		4.25	□□□□□ -1.73
MSM1	YGR171C	GPP2	P40106	250 aa	Known RBP	4.25	□□□□□ -1.73
MSM1	YGR171C	CCT5	P40413	562 aa	Known RBP	4.25	□□□□□ -1.73
MSM1	YGR171C	VHR1	P40522	640 aa		4.25	□□□□□ -1.73
MSM1	YGR171C	NIT2	P47016	307 aa		4.25	□□□□□ -1.73
MSM1	YGR171C	PCL10	P53124	433 aa		4.25	□□□□□ -1.73
MSM1	YGR171C	YLR224W	Q05947	369 aa		4.25	□□□□□ -1.73
MSM1	YGR171C	BUD21	Q08492	214 aa	Predicted RBP	4.25	□□□□□ -1.73
MSM1	YGR171C	NGG1	P32494	702 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	PLB1	P39105	664 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	ECM9	Q02202	377 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	PKH1	Q03407	766 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	CEF1	Q03654	590 aa	Predicted RBP	4.24	□□□□□ -1.73
MSM1	YGR171C	MUS81	Q04149	632 aa	Predicted RBP	4.24	□□□□□ -1.73
MSM1	YGR171C	CDA2	Q06703	312 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	SEC21	P32074	935 aa	Known RBP	4.24	□□□□□ -1.73
MSM1	YGR171C	DAL3	P32459	195 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	MAL31	P38156	614 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	MSS4	P38994	779 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	PFA3	P42836	336 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	YBP2	P53169	641 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	RIM8	P53179	542 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	ASI2	P53895	289 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	ORC4	P54791	529 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	ECM16	Q04217	1267 aa	Known RBP	4.24	□□□□□ -1.73
MSM1	YGR171C	KCS1	Q12494	1050 aa		4.24	□□□□□ -1.73
MSM1	YGR171C	TRX2	P22803	104 aa	Known RBP	4.23	□□□□□ -1.73
MSM1	YGR171C	FUI1	P38196	639 aa		4.23	□□□□□ -1.73
MSM1	YGR171C	BIT2	P38346	545 aa		4.23	□□□□□ -1.73
MSM1	YGR171C	MIP6	P38760	659 aa	Known RBP	4.23	□□□□□ -1.73
MSM1	YGR171C	BFA1	P47113	574 aa		4.23	□□□□□ -1.73
MSM1	YGR171C	ATG16	Q03818	150 aa		4.23	□□□□□ -1.73
MSM1	YGR171C	PEX19	Q07418	342 aa		4.23	□□□□□ -1.73
MSM1	YGR171C	TUB3	P09734	445 aa	Known RBP	4.22	□□□□□ -1.73
MSM1	YGR171C	PRP6	P19735	899 aa	Predicted RBP	4.22	□□□□□ -1.73
MSM1	YGR171C	DPB3	P27344	201 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	NIC96	P34077	839 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	TOD6	P34219	525 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	TRZ1	P36159	838 aa	Predicted RBP	4.22	□□□□□ -1.73
MSM1	YGR171C	PIP2	P52960	996 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	SPC105	P53148	917 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	ARP4	P80428	489 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	GPD1	Q00055	391 aa	Known RBP	4.22	□□□□□ -1.73
MSM1	YGR171C	MET14	Q02196	202 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	ASM4	Q05166	528 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	DCS2	Q12123	353 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	GPR1	Q12361	961 aa		4.22	□□□□□ -1.73
MSM1	YGR171C	GAL1	P04385	528 aa		4.21	□□□□□ -1.73
MSM1	YGR171C	CAD1	P24813	409 aa	Known RBP	4.21	□□□□□ -1.73
MSM1	YGR171C	YKR075C	P36155	307 aa		4.21	□□□□□ -1.73
MSM1	YGR171C	SSZ1	P38788	538 aa	Known RBP	4.21	□□□□□ -1.73
MSM1	YGR171C	EMP65	P40085	556 aa		4.21	□□□□□ -1.73
MSM1	YGR171C	YJR039W	P47107	1121 aa		4.21	□□□□□ -1.73
MSM1	YGR171C	SLD3	P53135	668 aa		4.21	□□□□□ -1.73
MSM1	YGR171C	SKY1	Q03656	742 aa		4.21	□□□□□ -1.73
MSM1	YGR171C	PIF1	P07271	859 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	PTP2	P29461	750 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	HEM12	P32347	362 aa	Predicted RBP	4.21	□□□□□ -1.74
MSM1	YGR171C	LST4	P34239	828 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	HXT6	P39003	570 aa	Known RBP	4.21	□□□□□ -1.74
MSM1	YGR171C	HXT7	P39004	570 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	YGR021W	P53212	290 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	UBX4	P54730	416 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	PTA1	Q01329	785 aa	Predicted RBP	4.21	□□□□□ -1.74
MSM1	YGR171C	YHM2	Q04013	314 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	PHM6	Q05637	104 aa		4.21	□□□□□ -1.74
MSM1	YGR171C	YLR358C	O13565	187 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	YLR415C	O13578	112 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	PGI1	P12709	554 aa	Known RBP	4.2	□□□□□ -1.74
MSM1	YGR171C	PRP4	P20053	465 aa	Known RBP	4.2	□□□□□ -1.74
MSM1	YGR171C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
MSM1	YGR171C	KAR4	P25583	335 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	YKL133C	P36066	463 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	RPP1	P38786	293 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	AVT1	P47082	602 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	PRP31	P49704	494 aa	Predicted RBP	4.2	□□□□□ -1.74
MSM1	YGR171C	SLU7	Q02775	382 aa	Known RBP	4.2	□□□□□ -1.74
MSM1	YGR171C	HFI1	Q12060	488 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	RRP6	Q12149	733 aa	Known RBP	4.2	□□□□□ -1.74
MSM1	YGR171C	TRM11	Q12463	433 aa		4.2	□□□□□ -1.74
MSM1	YGR171C	RPS21A	P0C0V8	87 aa	Known RBP	4.19	□□□□□ -1.74
MSM1	YGR171C	COX11	P19516	300 aa	Known RBP	4.19	□□□□□ -1.74
MSM1	YGR171C	RNQ1	P25367	405 aa		4.19	□□□□□ -1.74
MSM1	YGR171C	KCC4	P25389	1037 aa		4.19	□□□□□ -1.74
MSM1	YGR171C	YBR259W	P38338	688 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms