RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W HOS4P40480 1083 aa4.33□□□□□ -1.72
VMA21YGR105W PRP31P49704 494 aaPredicted RBP4.33□□□□□ -1.72
VMA21YGR105W YBP2P53169 641 aa4.33□□□□□ -1.72
VMA21YGR105W TEX1P53851 422 aaKnown RBP4.33□□□□□ -1.72
VMA21YGR105W FPR4Q06205 392 aaPredicted RBP4.33□□□□□ -1.72
VMA21YGR105W HOG1P32485 435 aa4.32□□□□□ -1.72
VMA21YGR105W HIS7P33734 552 aaKnown RBP4.32□□□□□ -1.72
VMA21YGR105W UBC9P50623 157 aaPredicted RBP4.32□□□□□ -1.72
VMA21YGR105W RNH70P53331 553 aa4.32□□□□□ -1.72
VMA21YGR105W ORC4P54791 529 aa4.32□□□□□ -1.72
VMA21YGR105W NHX1Q04121 633 aa4.32□□□□□ -1.72
VMA21YGR105W POB3Q04636 552 aaKnown RBP4.32□□□□□ -1.72
VMA21YGR105W GAD1Q04792 585 aa4.32□□□□□ -1.72
VMA21YGR105W ADE2P21264 571 aaKnown RBP4.31□□□□□ -1.72
VMA21YGR105W HSL7P38274 827 aa4.31□□□□□ -1.72
VMA21YGR105W YHL017WP38745 532 aa4.31□□□□□ -1.72
VMA21YGR105W BCD1P38772 366 aa4.31□□□□□ -1.72
VMA21YGR105W DAS1P47005 663 aa4.31□□□□□ -1.72
VMA21YGR105W AIM14P53109 570 aa4.31□□□□□ -1.72
VMA21YGR105W GND2P53319 492 aa4.31□□□□□ -1.72
VMA21YGR105W TIM44Q01852 431 aa4.31□□□□□ -1.72
VMA21YGR105W RPN7Q06103 429 aaKnown RBP4.31□□□□□ -1.72
VMA21YGR105W TAD3Q9URQ3 322 aa4.31□□□□□ -1.72
VMA21YGR105W PPG1P32838 368 aa4.3□□□□□ -1.72
VMA21YGR105W YHR112CP38716 378 aa4.3□□□□□ -1.72
VMA21YGR105W MIP6P38760 659 aaKnown RBP4.3□□□□□ -1.72
VMA21YGR105W PCL5P38794 229 aa4.3□□□□□ -1.72
VMA21YGR105W ARG5,6Q01217 863 aa4.3□□□□□ -1.72
VMA21YGR105W HBT1Q07653 1046 aaKnown RBP4.3□□□□□ -1.72
VMA21YGR105W ATG11Q12527 1178 aa4.3□□□□□ -1.72
VMA21YGR105W PCL2P25693 308 aa4.29□□□□□ -1.72
VMA21YGR105W MTH1P35198 433 aa4.29□□□□□ -1.72
VMA21YGR105W ECM1P39715 212 aa4.29□□□□□ -1.72
VMA21YGR105W BAP3P41815 604 aa4.29□□□□□ -1.72
VMA21YGR105W UBC11P52492 156 aa4.29□□□□□ -1.72
VMA21YGR105W MTL1P53214 551 aa4.29□□□□□ -1.72
VMA21YGR105W ALG12P53730 551 aa4.29□□□□□ -1.72
VMA21YGR105W HMG1P12683 1054 aa4.28□□□□□ -1.72
VMA21YGR105W SFL1P20134 766 aa4.28□□□□□ -1.72
VMA21YGR105W ERG6P25087 383 aaKnown RBP4.28□□□□□ -1.72
VMA21YGR105W APL2P36000 726 aaPredicted RBP4.28□□□□□ -1.72
VMA21YGR105W SPC42P36094 363 aa4.28□□□□□ -1.72
VMA21YGR105W LYS9P38999 446 aa4.28□□□□□ -1.72
VMA21YGR105W DOT6P40059 670 aaKnown RBP4.28□□□□□ -1.72
VMA21YGR105W SDS3P40505 327 aa4.28□□□□□ -1.72
VMA21YGR105W ARP4P80428 489 aa4.28□□□□□ -1.72
VMA21YGR105W LEE1Q02799 301 aaKnown RBP4.28□□□□□ -1.72
VMA21YGR105W TFB2Q02939 513 aa4.28□□□□□ -1.72
VMA21YGR105W ATG33Q06485 197 aa4.28□□□□□ -1.72
VMA21YGR105W IRC10Q08118 586 aa4.28□□□□□ -1.72
VMA21YGR105W HIR1P32479 840 aa4.27□□□□□ -1.73
VMA21YGR105W RRP14P36080 434 aaKnown RBP4.27□□□□□ -1.73
VMA21YGR105W YKR018CP36114 725 aa4.27□□□□□ -1.73
VMA21YGR105W TRZ1P36159 838 aaPredicted RBP4.27□□□□□ -1.73
VMA21YGR105W PCM1P38628 557 aaKnown RBP4.27□□□□□ -1.73
VMA21YGR105W FMP52P40008 231 aa4.27□□□□□ -1.73
VMA21YGR105W STU2P46675 888 aa4.27□□□□□ -1.73
VMA21YGR105W PCL10P53124 433 aa4.27□□□□□ -1.73
VMA21YGR105W RIA1P53893 1110 aa4.27□□□□□ -1.73
VMA21YGR105W CTK1Q03957 528 aaKnown RBP4.27□□□□□ -1.73
VMA21YGR105W GIN4Q12263 1142 aa4.27□□□□□ -1.73
VMA21YGR105W HRP1Q99383 534 aaKnown RBP4.27□□□□□ -1.73
VMA21YGR105W YEL1P34225 687 aa4.26□□□□□ -1.73
VMA21YGR105W MNN4P36044 1178 aa4.26□□□□□ -1.73
VMA21YGR105W CBR1P38626 284 aaKnown RBP4.26□□□□□ -1.73
VMA21YGR105W FMO1P38866 432 aa4.26□□□□□ -1.73
VMA21YGR105W CCT3P39077 534 aaKnown RBP4.26□□□□□ -1.73
VMA21YGR105W RGC1Q06108 1083 aaKnown RBP4.26□□□□□ -1.73
VMA21YGR105W MCM21Q06675 368 aa4.26□□□□□ -1.73
VMA21YGR105W YLR001CQ07895 862 aa4.26□□□□□ -1.73
VMA21YGR105W SGO1Q08490 590 aa4.26□□□□□ -1.73
VMA21YGR105W MRH1Q12117 320 aaPredicted RBP4.26□□□□□ -1.73
VMA21YGR105W CCR4P31384 837 aaKnown RBP4.25□□□□□ -1.73
VMA21YGR105W MVD1P32377 396 aaKnown RBP4.25□□□□□ -1.73
VMA21YGR105W APT2P36973 181 aa4.25□□□□□ -1.73
VMA21YGR105W SFB3P38810 929 aa4.25□□□□□ -1.73
VMA21YGR105W REV7P38927 245 aa4.25□□□□□ -1.73
VMA21YGR105W QRI1P43123 477 aaKnown RBP4.25□□□□□ -1.73
VMA21YGR105W TEL2P53038 688 aa4.25□□□□□ -1.73
VMA21YGR105W MET13P53128 600 aa4.25□□□□□ -1.73
VMA21YGR105W YNL193WP53870 558 aa4.25□□□□□ -1.73
VMA21YGR105W COG8Q04632 607 aa4.25□□□□□ -1.73
VMA21YGR105W RNR1P21524 888 aaKnown RBP4.24□□□□□ -1.73
VMA21YGR105W NUP60P39705 539 aa4.24□□□□□ -1.73
VMA21YGR105W YNL195CP40168 261 aa4.24□□□□□ -1.73
VMA21YGR105W PAN2P53010 1115 aaPredicted RBP4.24□□□□□ -1.73
VMA21YGR105W BRE5P53741 515 aaKnown RBP4.24□□□□□ -1.73
VMA21YGR105W SSL2Q00578 843 aa4.24□□□□□ -1.73
VMA21YGR105W NOP14Q99207 810 aaKnown RBP4.24□□□□□ -1.73
VMA21YGR105W SIR3P06701 978 aa4.23□□□□□ -1.73
VMA21YGR105W RPL8AP17076 256 aaKnown RBP4.23□□□□□ -1.73
VMA21YGR105W HRB1P38922 454 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
VMA21YGR105W GET2P40056 285 aa4.23□□□□□ -1.73
VMA21YGR105W GID8P40208 455 aa4.23□□□□□ -1.73
VMA21YGR105W COX18P53239 316 aa4.23□□□□□ -1.73
VMA21YGR105W REC102Q02721 264 aa4.23□□□□□ -1.73
VMA21YGR105W YKL033W-AQ86ZR7 236 aa4.23□□□□□ -1.73
VMA21YGR105W MNN1P39106 762 aa4.22□□□□□ -1.73
VMA21YGR105W SET2P46995 733 aaKnown RBP4.22□□□□□ -1.73
VMA21YGR105W HMO1Q03973 246 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms