RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	ARC35	P53731	342 aa	Known RBP	4.46	□□□□□ -1.7
SLX8	YER116C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	not detected
SLX8	YER116C	YPL071C	Q02864	156 aa		4.46	□□□□□ -1.7
SLX8	YER116C	NOG1	Q02892	647 aa	Known RBP	4.46	□□□□□ -1.7
SLX8	YER116C	YMR187C	Q03236	431 aa		4.46	□□□□□ -1.7
SLX8	YER116C	YMR155W	Q03795	547 aa		4.46	□□□□□ -1.7
SLX8	YER116C	YHM2	Q04013	314 aa		4.46	□□□□□ -1.7
SLX8	YER116C	COG8	Q04632	607 aa		4.46	□□□□□ -1.7
SLX8	YER116C	MFB1	Q04922	465 aa		4.46	□□□□□ -1.7
SLX8	YER116C	DUS3	Q06053	668 aa	Known RBP	4.46	□□□□□ -1.7
SLX8	YER116C	TDA6	Q06466	467 aa		4.46	□□□□□ -1.7
SLX8	YER116C	YPR172W	Q06608	200 aa		4.46	□□□□□ -1.7
SLX8	YER116C	RSC3	Q06639	885 aa		4.46	□□□□□ -1.7
SLX8	YER116C	SWA2	Q06677	668 aa		4.46	□□□□□ -1.7
SLX8	YER116C	CUE5	Q08412	411 aa	Known RBP	4.46	□□□□□ -1.7
SLX8	YER116C	YOR296W	Q08748	1289 aa		4.46	□□□□□ -1.7
SLX8	YER116C	GUP2	Q08929	609 aa		4.46	□□□□□ -1.7
SLX8	YER116C	PLP2	Q12017	286 aa		4.46	□□□□□ -1.7
SLX8	YER116C	NUR1	Q12066	484 aa		4.46	□□□□□ -1.7
SLX8	YER116C	ILS1	P09436	1072 aa	Known RBP	4.45	□□□□□ -1.7
SLX8	YER116C	MNE1	P24720	663 aa		4.45	□□□□□ -1.7
SLX8	YER116C	RAD51	P25454	400 aa		4.45	□□□□□ -1.7
SLX8	YER116C	SRO9	P25567	434 aa	Known RBP	4.45	□□□□□ -1.7
SLX8	YER116C	PER1	P25625	357 aa		4.45	□□□□□ -1.7
SLX8	YER116C	IME2	P32581	645 aa		4.45	□□□□□ -1.7
SLX8	YER116C	KAP122	P32767	1081 aa		4.45	□□□□□ -1.7
SLX8	YER116C	NPL6	P32832	435 aa		4.45	□□□□□ -1.7
SLX8	YER116C	RPT3	P33298	428 aa	Known RBP	4.45	□□□□□ -1.7
SLX8	YER116C	MRPL16	P38064	232 aa		4.45	□□□□□ -1.7
SLX8	YER116C	YRO2	P38079	344 aa		4.45	□□□□□ -1.7
SLX8	YER116C	RDH54	P38086	958 aa		4.45	□□□□□ -1.7
SLX8	YER116C	VPS41	P38959	992 aa		4.45	□□□□□ -1.7
SLX8	YER116C	PCL7	P40186	285 aa		4.45	□□□□□ -1.7
SLX8	YER116C	SIP5	P40210	489 aa	Known RBP	4.45	□□□□□ -1.7
SLX8	YER116C	IMA5	P40884	581 aa		4.45	□□□□□ -1.7
SLX8	YER116C	CIR1	P42940	261 aa		4.45	□□□□□ -1.7
SLX8	YER116C	CIT3	P43635	486 aa		4.45	□□□□□ -1.7
SLX8	YER116C	OCA1	P50946	238 aa	Predicted RBP	4.45	□□□□□ -1.7
SLX8	YER116C	UTP22	P53254	1237 aa	Predicted RBP	4.45	□□□□□ -1.7
SLX8	YER116C	CBK1	P53894	756 aa		4.45	□□□□□ -1.7
SLX8	YER116C	PTA1	Q01329	785 aa	Predicted RBP	4.45	□□□□□ -1.7
SLX8	YER116C	EST2	Q06163	884 aa		4.45	□□□□□ -1.7
SLX8	YER116C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.45	□□□□□ -1.7	not detected
SLX8	YER116C	REX3	Q12090	404 aa		4.45	□□□□□ -1.7
SLX8	YER116C	DCS2	Q12123	353 aa		4.45	□□□□□ -1.7
SLX8	YER116C	ISA2	Q12425	185 aa		4.45	□□□□□ -1.7
SLX8	YER116C	TUF1	P02992	437 aa	Known RBP	4.44	□□□□□ -1.7
SLX8	YER116C	SNF1	P06782	633 aa	Known RBP	4.44	□□□□□ -1.7
SLX8	YER116C	NUC1	P08466	329 aa		4.44	□□□□□ -1.7
SLX8	YER116C	CDC16	P09798	840 aa		4.44	□□□□□ -1.7
SLX8	YER116C	PMS1	P14242	873 aa		4.44	□□□□□ -1.7
SLX8	YER116C	CMP2	P14747	604 aa		4.44	□□□□□ -1.7
SLX8	YER116C	VMA2	P16140	517 aa	Known RBP	4.44	□□□□□ -1.7
SLX8	YER116C	APN1	P22936	367 aa		4.44	□□□□□ -1.7
SLX8	YER116C	XRS2	P33301	854 aa		4.44	□□□□□ -1.7
SLX8	YER116C	RIB7	P33312	244 aa		4.44	□□□□□ -1.7
SLX8	YER116C	FTH1	P38310	465 aa		4.44	□□□□□ -1.7
SLX8	YER116C	RIM11	P38615	370 aa		4.44	□□□□□ -1.7
SLX8	YER116C	SPC72	P39723	622 aa		4.44	□□□□□ -1.7
SLX8	YER116C	RTT105	P40063	208 aa		4.44	□□□□□ -1.7
SLX8	YER116C	LSM5	P40089	93 aa	Known RBP	4.44	□□□□□ -1.7
SLX8	YER116C	YTA6	P40328	754 aa		4.44	□□□□□ -1.7
SLX8	YER116C	LYS14	P40971	790 aa		4.44	□□□□□ -1.7
SLX8	YER116C	FYV8	P46949	817 aa	Known RBP	4.44	□□□□□ -1.7
SLX8	YER116C	POL31	P46957	487 aa		4.44	□□□□□ -1.7
SLX8	YER116C	MAD3	P47074	515 aa		4.44	□□□□□ -1.7
SLX8	YER116C	YNR014W	P53719	212 aa		4.44	□□□□□ -1.7
SLX8	YER116C	MRPL13	Q02204	264 aa		4.44	□□□□□ -1.7
SLX8	YER116C	RAD33	Q04231	177 aa		4.44	□□□□□ -1.7
SLX8	YER116C	HLR1	Q04429	423 aa		4.44	□□□□□ -1.7
SLX8	YER116C	RNH1	Q04740	348 aa		4.44	□□□□□ -1.7
SLX8	YER116C	VID22	Q05934	901 aa		4.44	□□□□□ -1.7
SLX8	YER116C	NFI1	Q12216	726 aa		4.44	□□□□□ -1.7
SLX8	YER116C	ARP7	Q12406	477 aa		4.44	□□□□□ -1.7
SLX8	YER116C	PAR32	Q12515	295 aa	Known RBP	4.44	□□□□□ -1.7
SLX8	YER116C	SEM1	O94742	89 aa		4.43	□□□□□ -1.7
SLX8	YER116C	RPS31	P05759	152 aa	Known RBP	4.43	□□□□□ -1.7
SLX8	YER116C	MET17	P06106	444 aa		4.43	□□□□□ -1.7
SLX8	YER116C	CKA1	P15790	372 aa		4.43	□□□□□ -1.7
SLX8	YER116C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.43	□□□□□ -1.7	not detected
SLX8	YER116C	REC107	P21651	314 aa		4.43	□□□□□ -1.7
SLX8	YER116C	MDL1	P33310	695 aa		4.43	□□□□□ -1.7
SLX8	YER116C	CNS1	P33313	385 aa		4.43	□□□□□ -1.7
SLX8	YER116C	APM3	P38153	483 aa		4.43	□□□□□ -1.7
SLX8	YER116C	YBR225W	P38321	900 aa		4.43	□□□□□ -1.7
SLX8	YER116C	LAM1	P38851	1228 aa		4.43	□□□□□ -1.7
SLX8	YER116C	SHU2	P38957	223 aa		4.43	□□□□□ -1.7
SLX8	YER116C	HXT6	P39003	570 aa	Known RBP	4.43	□□□□□ -1.7
SLX8	YER116C	HXT7	P39004	570 aa		4.43	□□□□□ -1.7
SLX8	YER116C	SAW1	P39735	261 aa		4.43	□□□□□ -1.7
SLX8	YER116C	UBP7	P40453	1071 aa		4.43	□□□□□ -1.7
SLX8	YER116C	RMD8	P43620	662 aa		4.43	□□□□□ -1.7
SLX8	YER116C	SPO74	P45819	413 aa		4.43	□□□□□ -1.7
SLX8	YER116C	YGR283C	P53336	341 aa	Predicted RBP	4.43	□□□□□ -1.7
SLX8	YER116C	ZDS2	P54786	942 aa		4.43	□□□□□ -1.7
SLX8	YER116C	LCD1	Q04377	747 aa		4.43	□□□□□ -1.7
SLX8	YER116C	OMS1	Q06668	471 aa		4.43	□□□□□ -1.7
SLX8	YER116C	YDL073W	Q07454	984 aa		4.43	□□□□□ -1.7
SLX8	YER116C	MET7	Q08645	548 aa		4.43	□□□□□ -1.7
SLX8	YER116C	KCS1	Q12494	1050 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 130.9 ms