RNA–Protein interactions for RNA: YER035W

EDC2, Transcript of RNA-binding protein that directly activates mRNA decapping, yeastyeast

Gene EDC2, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EDC2YER035W CSE1P33307 960 aa8.36□□□□□ -1.07
EDC2YER035W KIC1P38692 1080 aa8.36□□□□□ -1.07
EDC2YER035W YEL076CP39971 216 aa8.36□□□□□ -1.07
EDC2YER035W VPS25P47142 202 aa8.36□□□□□ -1.07
EDC2YER035W SHE10P53075 577 aa8.36□□□□□ -1.07
EDC2YER035W SEC5P89102 971 aa8.36□□□□□ -1.07
EDC2YER035W WAR1Q03631 944 aa8.36□□□□□ -1.07
EDC2YER035W TIF35Q04067 274 aaKnown RBP8.36□□□□□ -1.07
EDC2YER035W SAM3Q08986 587 aa8.36□□□□□ -1.07
EDC2YER035W SPE3Q12074 293 aaKnown RBP8.36□□□□□ -1.07
EDC2YER035W ASP3-2P0CX77 362 aa8.35□□□□□ -1.07
EDC2YER035W ASP3-3P0CX78 362 aa8.35□□□□□ -1.07
EDC2YER035W ASP3-4P0CX79 362 aa8.35□□□□□ -1.07
EDC2YER035W ASP3-1P0CZ17 362 aa8.35□□□□□ -1.07
EDC2YER035W SSB1P11484 613 aaKnown RBP8.35□□□□□ -1.07
EDC2YER035W SWE1P32944 819 aa8.35□□□□□ -1.07
EDC2YER035W SLA2P33338 968 aa8.35□□□□□ -1.07
EDC2YER035W PPS1P38148 807 aa8.35□□□□□ -1.07
EDC2YER035W GIP1P38229 639 aa8.35□□□□□ -1.07
EDC2YER035W YHR054CP38780 354 aa8.35□□□□□ -1.07
EDC2YER035W SSB2P40150 613 aaKnown RBP8.35□□□□□ -1.07
EDC2YER035W BTT1P40314 149 aaPredicted RBP8.35□□□□□ -1.07
EDC2YER035W YDL206WQ12424 762 aa8.35□□□□□ -1.07
EDC2YER035W PDC6P26263 563 aaKnown RBP8.34□□□□□ -1.07
EDC2YER035W UBP13P38187 747 aa8.34□□□□□ -1.07
EDC2YER035W DOT6P40059 670 aaKnown RBP8.34□□□□□ -1.07
EDC2YER035W GCN5Q03330 439 aa8.34□□□□□ -1.07
EDC2YER035W CDC53Q12018 815 aaKnown RBP8.34□□□□□ -1.07
EDC2YER035W MTF1P14908 341 aaKnown RBP8.33□□□□□ -1.08
EDC2YER035W CBP3P21560 335 aa8.33□□□□□ -1.08
EDC2YER035W ASF1P32447 279 aa8.33□□□□□ -1.08
EDC2YER035W MNN4P36044 1178 aa8.33□□□□□ -1.08
EDC2YER035W PCF11P39081 626 aaPredicted RBP8.33□□□□□ -1.08
EDC2YER035W UBA2P52488 636 aa8.33□□□□□ -1.08
EDC2YER035W TSR1Q07381 788 aaKnown RBP8.33□□□□□ -1.08
EDC2YER035W NDJ1Q12366 352 aa8.33□□□□□ -1.08
EDC2YER035W VMA1P17255 1071 aaKnown RBP8.32□□□□□ -1.08
EDC2YER035W GUT1P32190 709 aa8.32□□□□□ -1.08
EDC2YER035W PEP7P32609 515 aa8.32□□□□□ -1.08
EDC2YER035W YKR051WP36142 418 aa8.32□□□□□ -1.08
EDC2YER035W AGP2P38090 596 aa8.32□□□□□ -1.08
EDC2YER035W SDS3P40505 327 aa8.32□□□□□ -1.08
EDC2YER035W CSN12P47130 423 aa8.32□□□□□ -1.08
EDC2YER035W HSH155P49955 971 aaKnown RBP8.32□□□□□ -1.08
EDC2YER035W NOP13P53883 403 aaKnown RBP RIP-Chip data8.32□□□□□ -1.08not detected
EDC2YER035W CEF1Q03654 590 aaPredicted RBP8.32□□□□□ -1.08
EDC2YER035W YLR407WQ06070 228 aa8.32□□□□□ -1.08
EDC2YER035W BSP1Q06604 576 aa8.32□□□□□ -1.08
EDC2YER035W HSF1P10961 833 aa8.31□□□□□ -1.08
EDC2YER035W ALG1P16661 449 aa8.31□□□□□ -1.08
EDC2YER035W SHE3P38272 425 aaKnown RBP8.31□□□□□ -1.08
EDC2YER035W NUP82P40368 713 aa8.31□□□□□ -1.08
EDC2YER035W RMD8P43620 662 aa8.31□□□□□ -1.08
EDC2YER035W CTF18P49956 741 aa8.31□□□□□ -1.08
EDC2YER035W RTC4P53850 401 aa8.31□□□□□ -1.08
EDC2YER035W YDL057WQ07379 328 aa8.31□□□□□ -1.08
EDC2YER035W DCS2Q12123 353 aa8.31□□□□□ -1.08
EDC2YER035W PTC5Q12511 572 aa8.31□□□□□ -1.08
EDC2YER035W TRL1P09880 827 aaKnown RBP8.3□□□□□ -1.08
EDC2YER035W YEL1P34225 687 aa8.3□□□□□ -1.08
EDC2YER035W YAP5P40574 245 aa8.3□□□□□ -1.08
EDC2YER035W YNR065CP53751 1116 aa8.3□□□□□ -1.08
EDC2YER035W KRE33P53914 1056 aaKnown RBP8.3□□□□□ -1.08
EDC2YER035W SMA1Q02651 245 aa8.3□□□□□ -1.08
EDC2YER035W SEG1Q04279 960 aa8.3□□□□□ -1.08
EDC2YER035W YDL129WQ07555 291 aa8.3□□□□□ -1.08
EDC2YER035W GPM2Q12008 311 aa8.3□□□□□ -1.08
EDC2YER035W TPK1P06244 397 aa8.29□□□□□ -1.08
EDC2YER035W CKA2P19454 339 aa8.29□□□□□ -1.08
EDC2YER035W ISF1P32488 338 aa8.29□□□□□ -1.08
EDC2YER035W TKL2P33315 681 aa8.29□□□□□ -1.08
EDC2YER035W YHL017WP38745 532 aa8.29□□□□□ -1.08
EDC2YER035W NUP60P39705 539 aa8.29□□□□□ -1.08
EDC2YER035W GDH3P39708 457 aa8.29□□□□□ -1.08
EDC2YER035W YIL161WP40449 235 aaKnown RBP8.29□□□□□ -1.08
EDC2YER035W PIL1P53252 339 aaKnown RBP8.29□□□□□ -1.08
EDC2YER035W YAT1P80235 687 aa8.29□□□□□ -1.08
EDC2YER035W JIP5Q06214 492 aaPredicted RBP8.29□□□□□ -1.08
EDC2YER035W YCG1Q06680 1035 aa8.29□□□□□ -1.08
EDC2YER035W PHO8P11491 566 aa8.28□□□□□ -1.08
EDC2YER035W DAL1P32375 460 aa8.28□□□□□ -1.08
EDC2YER035W MUD1P32605 298 aaKnown RBP8.28□□□□□ -1.08
EDC2YER035W XRS2P33301 854 aa8.28□□□□□ -1.08
EDC2YER035W PIN4P34217 668 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
EDC2YER035W TIF5P38431 405 aaKnown RBP8.28□□□□□ -1.08
EDC2YER035W OCA5P38738 679 aa8.28□□□□□ -1.08
EDC2YER035W GGA2P38817 585 aaKnown RBP8.28□□□□□ -1.08
EDC2YER035W MUB1Q03162 620 aa8.28□□□□□ -1.08
EDC2YER035W TSA1P34760 196 aaKnown RBP8.27□□□□□ -1.09
EDC2YER035W NPP2P39997 493 aa8.27□□□□□ -1.09
EDC2YER035W SHQ1P40486 507 aaPredicted RBP8.27□□□□□ -1.09
EDC2YER035W YIR007WP40566 764 aa8.27□□□□□ -1.09
EDC2YER035W MTD1Q02046 320 aaKnown RBP8.27□□□□□ -1.09
EDC2YER035W YPL277CQ08989 487 aa8.27□□□□□ -1.09
EDC2YER035W SGT2Q12118 346 aaKnown RBP8.27□□□□□ -1.09
EDC2YER035W RAD3P06839 778 aa8.26□□□□□ -1.09
EDC2YER035W RGP1P16664 663 aa8.26□□□□□ -1.09
EDC2YER035W DAL7P21826 554 aa8.26□□□□□ -1.09
EDC2YER035W TFB1P32776 642 aa8.26□□□□□ -1.09
EDC2YER035W PDR3P33200 976 aa8.26□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms