RNA–Protein interactions for RNA: YDR447C

RPS17B, Transcript of Ribosomal protein 51 (rp51) of the small (40s) subunit, yeast

Gene RPS17B, Length 411 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS17B	YDR447C	SUB1	P54000	292 aa	Known RBP	3.11	□□□□□ -1.91
RPS17B	YDR447C	UBX4	P54730	416 aa		3.11	□□□□□ -1.91
RPS17B	YDR447C	PTA1	Q01329	785 aa	Predicted RBP	3.11	□□□□□ -1.91
RPS17B	YDR447C	ATG16	Q03818	150 aa		3.11	□□□□□ -1.91
RPS17B	YDR447C	ECM16	Q04217	1267 aa	Known RBP	3.11	□□□□□ -1.91
RPS17B	YDR447C	YPL277C	Q08989	487 aa		3.11	□□□□□ -1.91
RPS17B	YDR447C	UPC2	Q12151	913 aa		3.11	□□□□□ -1.91
RPS17B	YDR447C	YDL177C	Q12257	170 aa		3.11	□□□□□ -1.91
RPS17B	YDR447C	SWI6	P09959	803 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	PTP2	P29461	750 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	YKU70	P32807	602 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	ATG19	P35193	415 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	TRZ1	P36159	838 aa	Predicted RBP	3.1	□□□□□ -1.91
RPS17B	YDR447C	SAK1	P38990	1142 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	BEM4	P39011	633 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	EMP65	P40085	556 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	URM1	P40554	99 aa	Predicted RBP	3.1	□□□□□ -1.91
RPS17B	YDR447C	YGR021W	P53212	290 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	GTF1	P53260	183 aa	Predicted RBP	3.1	□□□□□ -1.91
RPS17B	YDR447C	ROT1	Q03691	256 aa		3.1	□□□□□ -1.91
RPS17B	YDR447C	MUS81	Q04149	632 aa	Predicted RBP	3.1	□□□□□ -1.91
RPS17B	YDR447C	CDC6	P09119	513 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	PRP4	P20053	465 aa	Known RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	HCA4	P20448	770 aa	Known RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	YKL133C	P36066	463 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	AKL1	P38080	1108 aa	Known RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	KTR4	P38131	464 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	TOS1	P38288	455 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	YHL041W	P38730	149 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	YHR202W	P38887	602 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	HIS6	P40545	261 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	PFA3	P42836	336 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	MET12	P46151	657 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	CTH1	P47976	325 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	MTR3	P48240	250 aa	Predicted RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	RNR4	P49723	345 aa	Known RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	CEF1	Q03654	590 aa	Predicted RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	VMS1	Q04311	632 aa	Known RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	YLR407W	Q06070	228 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	SGD1	Q06132	899 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	MLC2	Q06580	163 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	PEX15	Q08215	383 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	MED7	Q08278	222 aa		3.09	□□□□□ -1.91
RPS17B	YDR447C	RRP6	Q12149	733 aa	Known RBP	3.09	□□□□□ -1.91
RPS17B	YDR447C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
RPS17B	YDR447C	TUB3	P09734	445 aa	Known RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	GLN4	P13188	809 aa	Known RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	CDC26	P14724	124 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	APA1	P16550	321 aa	Known RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	SED4	P25365	1065 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	LAM1	P38851	1228 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	MSS4	P38994	779 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	PZF1	P39933	429 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	VHR1	P40522	640 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	VID28	P40547	921 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	LSB3	P43603	459 aa	Known RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	CHA4	P43634	648 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	BFA1	P47113	574 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	NCS6	P53088	359 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	ASI2	P53895	289 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	NOP15	P53927	220 aa	Predicted RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	GPD1	Q00055	391 aa	Known RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	CEG1	Q01159	459 aa	Predicted RBP	3.08	□□□□□ -1.92
RPS17B	YDR447C	DUS4	Q06063	367 aa		3.08	□□□□□ -1.92
RPS17B	YDR447C	HIS5	P07172	385 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	PFK1	P16861	987 aa	Known RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	EMC1	P25574	760 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	IMG2	P25642	146 aa	Predicted RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	SEC21	P32074	935 aa	Known RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	HXT4	P32467	576 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
RPS17B	YDR447C	YKR075C	P36155	307 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	RIM4	P38741	713 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	MEF2	P39677	819 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	EAF5	P39995	279 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	GID8	P40208	455 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	SET2	P46995	733 aa	Known RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	VPS62	P53285	467 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	CNM67	P53865	581 aa	Known RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	ORC4	P54791	529 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	SLU7	Q02775	382 aa	Known RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	SVL3	Q03088	825 aa	Known RBP	3.07	□□□□□ -1.92
RPS17B	YDR447C	YPS7	Q06325	596 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	BRE4	Q07660	1125 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	HMI1	Q12039	706 aa		3.07	□□□□□ -1.92
RPS17B	YDR447C	RPS17A	P02407	136 aa	Known RBP	3.06	□□□□□ -1.92
RPS17B	YDR447C	MSS18	P08593	268 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	RPS17B	P14127	136 aa	Known RBP	3.06	□□□□□ -1.92
RPS17B	YDR447C	YKL222C	P35995	705 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	APN2	P38207	520 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	QRI7	P43122	407 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	IES1	P43579	692 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	IRC5	P43610	853 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	SNO2	P53823	222 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	VPS72	Q03388	795 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	YMR210W	Q03649	449 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	OMS1	Q06668	471 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	YDL121C	Q07541	149 aa		3.06	□□□□□ -1.92
RPS17B	YDR447C	NGL1	Q08213	363 aa	Known RBP	3.06	□□□□□ -1.92
RPS17B	YDR447C	GPB1	Q08886	897 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms