RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	CDC27	P38042	758 aa		13.7	□□□□□ -0.22
NPL3	YDR432W	SFB3	P38810	929 aa		13.7	□□□□□ -0.22
NPL3	YDR432W	ATH1	P48016	1211 aa		13.7	□□□□□ -0.22
NPL3	YDR432W	SFB2	P53953	876 aa		13.7	□□□□□ -0.22
NPL3	YDR432W	YKL023W	P36103	277 aa	Known RBP	13.69	□□□□□ -0.22
NPL3	YDR432W	GIS3	Q12418	502 aa		13.69	□□□□□ -0.22
NPL3	YDR432W	MAK16	P10962	306 aa	Predicted RBP	13.68	□□□□□ -0.22
NPL3	YDR432W	SIS1	P25294	352 aa	Known RBP	13.68	□□□□□ -0.22
NPL3	YDR432W	HCM1	P25364	564 aa		13.68	□□□□□ -0.22
NPL3	YDR432W	SWI3	P32591	825 aa		13.68	□□□□□ -0.22
NPL3	YDR432W	KAP123	P40069	1113 aa	Known RBP	13.68	□□□□□ -0.22
NPL3	YDR432W	BTT1	P40314	149 aa	Predicted RBP	13.68	□□□□□ -0.22
NPL3	YDR432W	ALT1	P52893	592 aa		13.68	□□□□□ -0.22
NPL3	YDR432W	VMS1	Q04311	632 aa	Known RBP	13.68	□□□□□ -0.22
NPL3	YDR432W	YPR027C	Q12079	277 aa		13.68	□□□□□ -0.22
NPL3	YDR432W	DDP1	Q99321	188 aa	Known RBP	13.68	□□□□□ -0.22
NPL3	YDR432W	GAC1	P28006	793 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	YKL091C	P33324	310 aa	Known RBP	13.67	□□□□□ -0.22
NPL3	YDR432W	SEG2	P34250	1132 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	TSA1	P34760	196 aa	Known RBP	13.67	□□□□□ -0.22
NPL3	YDR432W	AGP2	P38090	596 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	DUG2	P38149	878 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	RVS167	P39743	482 aa	Known RBP	13.67	□□□□□ -0.22
NPL3	YDR432W	TOS3	P43637	560 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	YHM2	Q04013	314 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	GPM2	Q12008	311 aa		13.67	□□□□□ -0.22
NPL3	YDR432W	PDH1	Q12428	516 aa	Known RBP	13.67	□□□□□ -0.22
NPL3	YDR432W	RPS14A	P06367	137 aa	Known RBP	13.66	□□□□□ -0.22
NPL3	YDR432W	CHS1	P08004	1131 aa		13.66	□□□□□ -0.22
NPL3	YDR432W	FUS1	P11710	512 aa		13.66	□□□□□ -0.22
NPL3	YDR432W	MTF1	P14908	341 aa	Known RBP	13.66	□□□□□ -0.22
NPL3	YDR432W	TKL2	P33315	681 aa		13.66	□□□□□ -0.22
NPL3	YDR432W	RPS14B	P39516	138 aa	Known RBP	13.66	□□□□□ -0.22
NPL3	YDR432W	TUB4	P53378	473 aa		13.66	□□□□□ -0.22
NPL3	YDR432W	RPA49	Q01080	415 aa	Predicted RBP	13.66	□□□□□ -0.22
NPL3	YDR432W	TBF1	Q02457	562 aa		13.66	□□□□□ -0.22
NPL3	YDR432W	YPL216W	Q08964	1102 aa		13.66	□□□□□ -0.22
NPL3	YDR432W	BEM2	P39960	2167 aa	Known RBP	13.65	□□□□□ -0.22
NPL3	YDR432W	GPA1	P08539	472 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	OM45	P16547	393 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	ROX1	P25042	368 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	ISF1	P32488	338 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	YKT6	P36015	200 aa	Known RBP	13.65	□□□□□ -0.22
NPL3	YDR432W	BCH2	P36122	765 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	POL12	P38121	705 aa	Predicted RBP	13.65	□□□□□ -0.22
NPL3	YDR432W	YER130C	P39959	443 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	IES1	P43579	692 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	UTP8	P53276	713 aa	Known RBP	13.65	□□□□□ -0.22
NPL3	YDR432W	HER2	Q03557	464 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	WAR1	Q03631	944 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	PRM6	Q04705	352 aa		13.65	□□□□□ -0.22
NPL3	YDR432W	RAD16	P31244	790 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	SAC6	P32599	642 aa	Known RBP	13.64	□□□□□ -0.23
NPL3	YDR432W	YKR051W	P36142	418 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	YBL036C	P38197	257 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	GYP8	P43570	497 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	YPT11	P48559	417 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	AIM44	Q99299	758 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	TRS33	Q99394	268 aa		13.64	□□□□□ -0.23
NPL3	YDR432W	TRP2	P00899	507 aa	Known RBP	13.63	□□□□□ -0.23
NPL3	YDR432W	STE11	P23561	717 aa		13.63	□□□□□ -0.23
NPL3	YDR432W	SIF2	P38262	535 aa		13.63	□□□□□ -0.23
NPL3	YDR432W	SHQ1	P40486	507 aa	Predicted RBP	13.63	□□□□□ -0.23
NPL3	YDR432W	RSM25	P40496	264 aa		13.63	□□□□□ -0.23
NPL3	YDR432W	YJR054W	P47114	497 aa		13.63	□□□□□ -0.23
NPL3	YDR432W	IWR1	Q07532	353 aa	Predicted RBP	13.63	□□□□□ -0.23
NPL3	YDR432W	MEX67	Q99257	599 aa	Known RBP	13.63	□□□□□ -0.23
NPL3	YDR432W	GAL10	P04397	699 aa		13.62	□□□□□ -0.23
NPL3	YDR432W	ARL1	P38116	183 aa	Known RBP	13.62	□□□□□ -0.23
NPL3	YDR432W	SAH1	P39954	449 aa	Known RBP	13.62	□□□□□ -0.23
NPL3	YDR432W	RGA2	Q06407	1009 aa		13.62	□□□□□ -0.23
NPL3	YDR432W	ABP140	Q08641	628 aa	Known RBP	13.62	□□□□□ -0.23
NPL3	YDR432W	YPQ1	Q12010	308 aa		13.62	□□□□□ -0.23
NPL3	YDR432W	CAN1	P04817	590 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	COX11	P19516	300 aa	Known RBP	13.61	□□□□□ -0.23
NPL3	YDR432W	IME1	P21190	360 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	RPN12	P32496	274 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	FRE1	P32791	686 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	YBR056W	P38081	501 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	NEM1	P38757	446 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	FMO1	P38866	432 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	FIG4	P42837	879 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	MFB1	Q04922	465 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	MPD2	Q99316	277 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	TEL1	P38110	2787 aa		13.61	□□□□□ -0.23
NPL3	YDR432W	RAD55	P38953	406 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	GEM1	P39722	662 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	ZAP1	P47043	880 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	RSM26	P47141	266 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	COS5	P47187	383 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	KRE33	P53914	1056 aa	Known RBP	13.6	□□□□□ -0.23
NPL3	YDR432W	YNL011C	P53980	444 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	CEG1	Q01159	459 aa	Predicted RBP	13.6	□□□□□ -0.23
NPL3	YDR432W	MUB1	Q03162	620 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	GIR2	Q03768	265 aa	Predicted RBP	13.6	□□□□□ -0.23
NPL3	YDR432W	TMN2	Q04562	672 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	SPP382	Q06411	708 aa	Predicted RBP	13.6	□□□□□ -0.23
NPL3	YDR432W	BSP1	Q06604	576 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	SLX4	Q12098	748 aa		13.6	□□□□□ -0.23
NPL3	YDR432W	SEN1	Q00416	2231 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms