RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C DAP2P18962 818 aa4.71□□□□□ -1.66
PRP28YDR243C PMA2P19657 947 aa4.71□□□□□ -1.66
PRP28YDR243C PRP6P19735 899 aaPredicted RBP4.71□□□□□ -1.66
PRP28YDR243C MBR1P23493 339 aa4.71□□□□□ -1.66
PRP28YDR243C APL1P27351 700 aa4.71□□□□□ -1.66
PRP28YDR243C CBF2P32504 956 aa4.71□□□□□ -1.66
PRP28YDR243C SMI1P32566 505 aa4.71□□□□□ -1.66
PRP28YDR243C YKL091CP33324 310 aaKnown RBP4.71□□□□□ -1.66
PRP28YDR243C VPS51P36116 164 aa4.71□□□□□ -1.66
PRP28YDR243C VMA22P38784 181 aa4.71□□□□□ -1.66
PRP28YDR243C ICP55P40051 511 aa4.71□□□□□ -1.66
PRP28YDR243C KAP123P40069 1113 aaKnown RBP4.71□□□□□ -1.66
PRP28YDR243C YFL066CP43538 392 aa4.71□□□□□ -1.66
PRP28YDR243C NUP84P52891 726 aa4.71□□□□□ -1.66
PRP28YDR243C ATG1P53104 897 aa4.71□□□□□ -1.66
PRP28YDR243C ERP6P53198 216 aa4.71□□□□□ -1.66
PRP28YDR243C YPL109CQ02981 657 aa4.71□□□□□ -1.66
PRP28YDR243C RNH1Q04740 348 aa4.71□□□□□ -1.66
PRP28YDR243C MCM21Q06675 368 aa4.71□□□□□ -1.66
PRP28YDR243C CDC53Q12018 815 aaKnown RBP4.71□□□□□ -1.66
PRP28YDR243C VIK1Q12045 647 aa4.71□□□□□ -1.66
PRP28YDR243C TY3B-GQ99315 1547 aa4.71□□□□□ -1.66
PRP28YDR243C LAM4P38800 1345 aa4.71□□□□□ -1.66
PRP28YDR243C TOM70P07213 617 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C TOM20P35180 183 aa4.7□□□□□ -1.66
PRP28YDR243C JNM1P36224 373 aa4.7□□□□□ -1.66
PRP28YDR243C SPP381P38282 291 aaPredicted RBP4.7□□□□□ -1.66
PRP28YDR243C DYS1P38791 387 aa4.7□□□□□ -1.66
PRP28YDR243C RPN10P38886 268 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C HXT13P39924 564 aa4.7□□□□□ -1.66
PRP28YDR243C MKT1P40850 830 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C AXL1P40851 1208 aa4.7□□□□□ -1.66
PRP28YDR243C MIC19P43594 170 aa4.7□□□□□ -1.66
PRP28YDR243C APT1P49435 187 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C FDC1Q03034 503 aa4.7□□□□□ -1.66
PRP28YDR243C RVB1Q03940 463 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C SPC24Q04477 213 aa4.7□□□□□ -1.66
PRP28YDR243C COX20Q04935 205 aa4.7□□□□□ -1.66
PRP28YDR243C SVF1Q05515 481 aa4.7□□□□□ -1.66
PRP28YDR243C NOP6Q07623 225 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C ISA1Q07821 250 aaPredicted RBP4.7□□□□□ -1.66
PRP28YDR243C UIP4Q08926 304 aa4.7□□□□□ -1.66
PRP28YDR243C SNF2P22082 1703 aa4.7□□□□□ -1.66
PRP28YDR243C RAD1P06777 1100 aa4.7□□□□□ -1.66
PRP28YDR243C ILS1P09436 1072 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C DSF1P0CX08 502 aa4.7□□□□□ -1.66
PRP28YDR243C YNR073CP0CX09 502 aa4.7□□□□□ -1.66
PRP28YDR243C UBA1P22515 1024 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C PEX1P24004 1043 aa4.7□□□□□ -1.66
PRP28YDR243C MEI4P29467 408 aa4.7□□□□□ -1.66
PRP28YDR243C RCN1P36054 211 aa4.7□□□□□ -1.66
PRP28YDR243C SET3P36124 751 aa4.7□□□□□ -1.66
PRP28YDR243C STP2P38704 541 aa4.7□□□□□ -1.66
PRP28YDR243C BFR1P38934 470 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
PRP28YDR243C YER156CP40093 338 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C ULP2P40537 1034 aaPredicted RBP4.7□□□□□ -1.66
PRP28YDR243C SNL1P40548 159 aa4.7□□□□□ -1.66
PRP28YDR243C YJR054WP47114 497 aa4.7□□□□□ -1.66
PRP28YDR243C HFM1P51979 1187 aa4.7□□□□□ -1.66
PRP28YDR243C MIG2P53035 382 aa4.7□□□□□ -1.66
PRP28YDR243C YNL144CP53907 740 aa4.7□□□□□ -1.66
PRP28YDR243C RPN4Q03465 531 aa4.7□□□□□ -1.66
PRP28YDR243C YCG1Q06680 1035 aa4.7□□□□□ -1.66
PRP28YDR243C VPS36Q06696 566 aa4.7□□□□□ -1.66
PRP28YDR243C NSE1Q07913 336 aa4.7□□□□□ -1.66
PRP28YDR243C NOB1Q08444 459 aaKnown RBP4.7□□□□□ -1.66
PRP28YDR243C TRM8Q12009 286 aa4.7□□□□□ -1.66
PRP28YDR243C SSF2Q12153 453 aaPredicted RBP4.7□□□□□ -1.66
PRP28YDR243C DPH6Q12429 685 aa4.7□□□□□ -1.66
PRP28YDR243C RRP36Q12481 300 aaPredicted RBP4.7□□□□□ -1.66
PRP28YDR243C KIN2P13186 1147 aaKnown RBP4.69□□□□□ -1.66
PRP28YDR243C GCN3P14741 305 aa4.69□□□□□ -1.66
PRP28YDR243C ISY1P21374 235 aaPredicted RBP4.69□□□□□ -1.66
PRP28YDR243C KIP1P28742 1111 aa4.69□□□□□ -1.66
PRP28YDR243C DLD3P39976 496 aaKnown RBP4.69□□□□□ -1.66
PRP28YDR243C ZRG8P40021 1076 aa4.69□□□□□ -1.66
PRP28YDR243C QDR2P40474 542 aa4.69□□□□□ -1.66
PRP28YDR243C SBE2P42223 864 aaKnown RBP4.69□□□□□ -1.66
PRP28YDR243C XKS1P42826 600 aa4.69□□□□□ -1.66
PRP28YDR243C TIM54P47045 478 aa4.69□□□□□ -1.66
PRP28YDR243C GNP1P48813 663 aa4.69□□□□□ -1.66
PRP28YDR243C COG2P53271 262 aa4.69□□□□□ -1.66
PRP28YDR243C BSC5P53755 489 aa4.69□□□□□ -1.66
PRP28YDR243C UFD2P54860 961 aa4.69□□□□□ -1.66
PRP28YDR243C GTR1Q00582 310 aa4.69□□□□□ -1.66
PRP28YDR243C RMD1Q03441 430 aa4.69□□□□□ -1.66
PRP28YDR243C DON1Q05610 365 aa4.69□□□□□ -1.66
PRP28YDR243C COA4Q05809 96 aa4.69□□□□□ -1.66
PRP28YDR243C NKP2Q06162 153 aa4.69□□□□□ -1.66
PRP28YDR243C YLR031WQ07978 186 aa4.69□□□□□ -1.66
PRP28YDR243C BUG1Q12191 341 aa4.69□□□□□ -1.66
PRP28YDR243C YOR1P53049 1477 aa4.69□□□□□ -1.66
PRP28YDR243C CNA1P23287 553 aa4.68□□□□□ -1.66
PRP28YDR243C CLB3P24870 427 aa4.68□□□□□ -1.66
PRP28YDR243C RPC53P25441 422 aa4.68□□□□□ -1.66
PRP28YDR243C VMA8P32610 256 aaKnown RBP4.68□□□□□ -1.66
PRP28YDR243C GEM1P39722 662 aa4.68□□□□□ -1.66
PRP28YDR243C FMP10P40098 244 aa4.68□□□□□ -1.66
PRP28YDR243C YER186CP40101 306 aa4.68□□□□□ -1.66
PRP28YDR243C MRM2P53123 320 aa4.68□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 142.5 ms