RNA–Protein interactions for RNA: YDR220C

YDR220C, Transcript of Dubious open reading frame, yeast

Gene YDR220C, Length 294 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR220C	YDR220C	PER1	P25625	357 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	NDC80	P40460	691 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	RLP7	P40693	322 aa	Known RBP	4.99	□□□□□ -1.61
YDR220C	YDR220C	PAN2	P53010	1115 aa	Predicted RBP	4.99	□□□□□ -1.61
YDR220C	YDR220C	RTA1	P53047	317 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	MTL1	P53214	551 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	YDR514C	Q04408	483 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	GAD1	Q04792	585 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	HOF1	Q05080	669 aa		4.99	□□□□□ -1.61
YDR220C	YDR220C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
YDR220C	YDR220C	SFB3	P38810	929 aa		4.98	□□□□□ -1.61
YDR220C	YDR220C	FMO1	P38866	432 aa		4.98	□□□□□ -1.61
YDR220C	YDR220C	LYS9	P38999	446 aa		4.98	□□□□□ -1.61
YDR220C	YDR220C	YDR338C	Q05497	695 aa		4.98	□□□□□ -1.61
YDR220C	YDR220C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
YDR220C	YDR220C	CCT3	P39077	534 aa	Known RBP	4.97	□□□□□ -1.61
YDR220C	YDR220C	HUL4	P40985	892 aa		4.97	□□□□□ -1.61
YDR220C	YDR220C	ATP25	Q03153	612 aa		4.97	□□□□□ -1.61
YDR220C	YDR220C	FLC1	Q08967	793 aa		4.97	□□□□□ -1.61
YDR220C	YDR220C	YKL033W-A	Q86ZR7	236 aa		4.97	□□□□□ -1.61
YDR220C	YDR220C	DIF1	O13577	133 aa		4.96	□□□□□ -1.62
YDR220C	YDR220C	PYC1	P11154	1178 aa	Known RBP	4.96	□□□□□ -1.62
YDR220C	YDR220C	SCT1	P32784	759 aa		4.96	□□□□□ -1.62
YDR220C	YDR220C	REV7	P38927	245 aa		4.96	□□□□□ -1.62
YDR220C	YDR220C	PRP31	P49704	494 aa	Predicted RBP	4.96	□□□□□ -1.62
YDR220C	YDR220C	SPO11	P23179	398 aa		4.95	□□□□□ -1.62
YDR220C	YDR220C	MVD1	P32377	396 aa	Known RBP	4.95	□□□□□ -1.62
YDR220C	YDR220C	SPC29	P33419	253 aa		4.95	□□□□□ -1.62
YDR220C	YDR220C	YHR112C	P38716	378 aa		4.95	□□□□□ -1.62
YDR220C	YDR220C	YAP1802	P53309	568 aa		4.95	□□□□□ -1.62
YDR220C	YDR220C	APM1	Q00776	475 aa	Predicted RBP	4.95	□□□□□ -1.62
YDR220C	YDR220C	ADE2	P21264	571 aa	Known RBP	4.94	□□□□□ -1.62
YDR220C	YDR220C	ERG6	P25087	383 aa	Known RBP	4.94	□□□□□ -1.62
YDR220C	YDR220C	YEL020C	P39994	560 aa		4.94	□□□□□ -1.62
YDR220C	YDR220C	YAP7	Q08182	245 aa		4.94	□□□□□ -1.62
YDR220C	YDR220C	CAN1	P04817	590 aa		4.93	□□□□□ -1.62
YDR220C	YDR220C	ECM1	P39715	212 aa		4.93	□□□□□ -1.62
YDR220C	YDR220C	ZDS1	P50111	915 aa	Known RBP	4.93	□□□□□ -1.62
YDR220C	YDR220C	FHN1	P53279	174 aa		4.93	□□□□□ -1.62
YDR220C	YDR220C	ICT1	Q12385	394 aa		4.93	□□□□□ -1.62
YDR220C	YDR220C	PHO11	P35842	467 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	PHO12	P38693	467 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	BDH2	P39713	417 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	RSP5	P39940	809 aa	Known RBP	4.92	□□□□□ -1.62
YDR220C	YDR220C	ALY2	P47029	1046 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	HUL5	P53119	910 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	YBP2	P53169	641 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	MRI1	Q06489	411 aa	Known RBP	4.92	□□□□□ -1.62
YDR220C	YDR220C	MLH3	Q12083	715 aa		4.92	□□□□□ -1.62
YDR220C	YDR220C	HRP1	Q99383	534 aa	Known RBP	4.92	□□□□□ -1.62
YDR220C	YDR220C	GLG1	P36143	616 aa		4.91	□□□□□ -1.62
YDR220C	YDR220C	NUP60	P39705	539 aa		4.91	□□□□□ -1.62
YDR220C	YDR220C	ARG2	P40360	574 aa		4.9	□□□□□ -1.63
YDR220C	YDR220C	CTR1	P49573	406 aa		4.9	□□□□□ -1.63
YDR220C	YDR220C	CTK1	Q03957	528 aa	Known RBP	4.9	□□□□□ -1.63
YDR220C	YDR220C	YLR149C	Q99296	730 aa		4.9	□□□□□ -1.63
YDR220C	YDR220C	Q0142	Q9ZZW4	58 aa		4.9	□□□□□ -1.63
YDR220C	YDR220C	TMT1	P32643	299 aa		4.89	□□□□□ -1.63
YDR220C	YDR220C	APL2	P36000	726 aa	Predicted RBP	4.89	□□□□□ -1.63
YDR220C	YDR220C	ARG5,6	Q01217	863 aa		4.89	□□□□□ -1.63
YDR220C	YDR220C	GET2	P40056	285 aa		4.88	□□□□□ -1.63
YDR220C	YDR220C	UBC9	P50623	157 aa	Predicted RBP	4.88	□□□□□ -1.63
YDR220C	YDR220C	RPN13	O13563	156 aa		4.87	□□□□□ -1.63
YDR220C	YDR220C	THR1	P17423	357 aa	Known RBP	4.87	□□□□□ -1.63
YDR220C	YDR220C	ATG4	P53867	494 aa		4.87	□□□□□ -1.63
YDR220C	YDR220C	USV1	Q12132	391 aa		4.87	□□□□□ -1.63
YDR220C	YDR220C	ORC2	P32833	620 aa		4.86	□□□□□ -1.63
YDR220C	YDR220C	SET3	P36124	751 aa		4.86	□□□□□ -1.63
YDR220C	YDR220C	TRZ1	P36159	838 aa	Predicted RBP	4.86	□□□□□ -1.63
YDR220C	YDR220C	OSW1	Q08692	278 aa		4.86	□□□□□ -1.63
YDR220C	YDR220C	PAC2	P39937	518 aa		4.85	□□□□□ -1.63
YDR220C	YDR220C	MCM21	Q06675	368 aa		4.85	□□□□□ -1.63
YDR220C	YDR220C	HOM2	P13663	365 aa	Known RBP	4.84	□□□□□ -1.63
YDR220C	YDR220C	VPS34	P22543	875 aa		4.84	□□□□□ -1.63
YDR220C	YDR220C	MCD4	P36051	919 aa		4.84	□□□□□ -1.63
YDR220C	YDR220C	MIP6	P38760	659 aa	Known RBP	4.84	□□□□□ -1.63
YDR220C	YDR220C	GLO1	P50107	326 aa		4.84	□□□□□ -1.63
YDR220C	YDR220C	ORC4	P54791	529 aa		4.84	□□□□□ -1.63
YDR220C	YDR220C	RIM13	Q03792	727 aa		4.84	□□□□□ -1.63
YDR220C	YDR220C	ZRT2	Q12436	422 aa		4.84	□□□□□ -1.63
YDR220C	YDR220C	CCR4	P31384	837 aa	Known RBP	4.83	□□□□□ -1.64
YDR220C	YDR220C	MTC2	P34246	357 aa		4.83	□□□□□ -1.64
YDR220C	YDR220C	BNA2	P47125	453 aa		4.83	□□□□□ -1.64
YDR220C	YDR220C	GAL11	P19659	1081 aa		4.82	□□□□□ -1.64
YDR220C	YDR220C	RNR1	P21524	888 aa	Known RBP	4.82	□□□□□ -1.64
YDR220C	YDR220C	FUB1	P25659	250 aa		4.82	□□□□□ -1.64
YDR220C	YDR220C	GDH3	P39708	457 aa		4.82	□□□□□ -1.64
YDR220C	YDR220C	YFL052W	P43551	465 aa		4.82	□□□□□ -1.64
YDR220C	YDR220C	MAL11	P53048	616 aa		4.82	□□□□□ -1.64
YDR220C	YDR220C	HMO1	Q03973	246 aa	Known RBP	4.82	□□□□□ -1.64
YDR220C	YDR220C	MIH1	P23748	554 aa		4.81	□□□□□ -1.64
YDR220C	YDR220C	YKR051W	P36142	418 aa		4.81	□□□□□ -1.64
YDR220C	YDR220C	APT2	P36973	181 aa		4.81	□□□□□ -1.64
YDR220C	YDR220C	MUP3	P38734	546 aa		4.81	□□□□□ -1.64
YDR220C	YDR220C	YJL049W	P47048	450 aa		4.81	□□□□□ -1.64
YDR220C	YDR220C	ERR1	P0CX10	437 aa		4.8	□□□□□ -1.64
YDR220C	YDR220C	ERR2	P0CX11	437 aa		4.8	□□□□□ -1.64
YDR220C	YDR220C	CRP1	P38845	465 aa	Known RBP	4.8	□□□□□ -1.64
YDR220C	YDR220C	MRK1	P50873	501 aa		4.8	□□□□□ -1.64
YDR220C	YDR220C	YNL195C	P40168	261 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms