RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C NRG1Q03125 231 aa5.68□□□□□ -1.5
RRI1YDL216C GIS1Q03833 894 aa5.68□□□□□ -1.5
RRI1YDL216C DLT1Q04216 342 aa5.68□□□□□ -1.5
RRI1YDL216C HMG1P12683 1054 aa5.67□□□□□ -1.5
RRI1YDL216C YKR051WP36142 418 aa5.67□□□□□ -1.5
RRI1YDL216C MGS1P40151 587 aa5.67□□□□□ -1.5
RRI1YDL216C HLJ1P48353 224 aa5.67□□□□□ -1.5
RRI1YDL216C ERG4P25340 473 aa5.66□□□□□ -1.5
RRI1YDL216C MIP6P38760 659 aaKnown RBP5.66□□□□□ -1.5
RRI1YDL216C CHS7P38843 316 aa5.66□□□□□ -1.5
RRI1YDL216C ECM1P39715 212 aa5.66□□□□□ -1.5
RRI1YDL216C FKH2P41813 862 aa5.66□□□□□ -1.5
RRI1YDL216C AMA1P50082 593 aa5.66□□□□□ -1.5
RRI1YDL216C AIM14P53109 570 aa5.66□□□□□ -1.5
RRI1YDL216C PCL10P53124 433 aa5.66□□□□□ -1.5
RRI1YDL216C MET13P53128 600 aa5.66□□□□□ -1.5
RRI1YDL216C CTF4Q01454 927 aa5.66□□□□□ -1.5
RRI1YDL216C KIN4Q01919 800 aa5.66□□□□□ -1.5
RRI1YDL216C GUD1Q07729 489 aa5.66□□□□□ -1.5
RRI1YDL216C TAD3Q9URQ3 322 aa5.66□□□□□ -1.5
RRI1YDL216C Q0142Q9ZZW4 58 aa5.66□□□□□ -1.5
RRI1YDL216C UBC9P50623 157 aaPredicted RBP5.65□□□□□ -1.51
RRI1YDL216C YGL081WP53156 320 aa5.65□□□□□ -1.51
RRI1YDL216C MRPS35P53292 345 aa5.65□□□□□ -1.51
RRI1YDL216C ASM4Q05166 528 aa5.65□□□□□ -1.51
RRI1YDL216C ATG11Q12527 1178 aa5.65□□□□□ -1.51
RRI1YDL216C CAF20P12962 161 aaKnown RBP5.64□□□□□ -1.51
RRI1YDL216C CCR4P31384 837 aaKnown RBP5.64□□□□□ -1.51
RRI1YDL216C ELO3P40319 345 aa5.64□□□□□ -1.51
RRI1YDL216C PRP31P49704 494 aaPredicted RBP5.64□□□□□ -1.51
RRI1YDL216C RNT1Q02555 471 aa5.64□□□□□ -1.51
RRI1YDL216C APT2P36973 181 aa5.63□□□□□ -1.51
RRI1YDL216C PMT3P47190 753 aa5.63□□□□□ -1.51
RRI1YDL216C THI73Q07904 523 aa5.63□□□□□ -1.51
RRI1YDL216C LAT1P12695 482 aaKnown RBP5.62□□□□□ -1.51
RRI1YDL216C APL2P36000 726 aaPredicted RBP5.62□□□□□ -1.51
RRI1YDL216C SUL1P38359 859 aa5.62□□□□□ -1.51
RRI1YDL216C CRP1P38845 465 aaKnown RBP5.62□□□□□ -1.51
RRI1YDL216C YIR042CP40586 236 aa5.62□□□□□ -1.51
RRI1YDL216C MUP1P50276 574 aa5.62□□□□□ -1.51
RRI1YDL216C YNR029CP53729 429 aaKnown RBP5.62□□□□□ -1.51
RRI1YDL216C GAD1Q04792 585 aa5.62□□□□□ -1.51
RRI1YDL216C YLR040CQ07988 224 aa5.62□□□□□ -1.51
RRI1YDL216C TGL5Q12043 749 aa5.62□□□□□ -1.51
RRI1YDL216C ARG5,6Q01217 863 aa5.61□□□□□ -1.51
RRI1YDL216C MCM21Q06675 368 aa5.61□□□□□ -1.51
RRI1YDL216C YOL073CQ08232 322 aa5.61□□□□□ -1.51
RRI1YDL216C NUP145P49687 1317 aa5.6□□□□□ -1.51
RRI1YDL216C PPR1P07272 904 aaPredicted RBP5.6□□□□□ -1.51
RRI1YDL216C CKB2P38930 258 aa5.6□□□□□ -1.51
RRI1YDL216C FRE5Q08908 694 aa5.6□□□□□ -1.51
RRI1YDL216C ALG7P07286 448 aa5.59□□□□□ -1.51
RRI1YDL216C ADE2P21264 571 aaKnown RBP5.59□□□□□ -1.51
RRI1YDL216C MAL31P38156 614 aa5.59□□□□□ -1.51
RRI1YDL216C YBR053CP38235 358 aa5.59□□□□□ -1.51
RRI1YDL216C REC102Q02721 264 aa5.59□□□□□ -1.51
RRI1YDL216C MNN4P36044 1178 aa5.58□□□□□ -1.52
RRI1YDL216C TRZ1P36159 838 aaPredicted RBP5.58□□□□□ -1.52
RRI1YDL216C TYS1P36421 394 aaKnown RBP5.58□□□□□ -1.52
RRI1YDL216C SSZ1P38788 538 aaKnown RBP5.58□□□□□ -1.52
RRI1YDL216C GID8P40208 455 aa5.58□□□□□ -1.52
RRI1YDL216C YJR039WP47107 1121 aa5.58□□□□□ -1.52
RRI1YDL216C TEX1P53851 422 aaKnown RBP5.58□□□□□ -1.52
RRI1YDL216C ARP4P80428 489 aa5.58□□□□□ -1.52
RRI1YDL216C GPD1Q00055 391 aaKnown RBP5.58□□□□□ -1.52
RRI1YDL216C UME1Q03010 460 aa5.58□□□□□ -1.52
RRI1YDL216C ADY4Q05955 493 aa5.58□□□□□ -1.52
RRI1YDL216C TRM13Q12383 476 aa5.58□□□□□ -1.52
RRI1YDL216C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
RRI1YDL216C PRP19P32523 503 aaKnown RBP5.57□□□□□ -1.52
RRI1YDL216C APN2P38207 520 aa5.57□□□□□ -1.52
RRI1YDL216C YHR112CP38716 378 aa5.57□□□□□ -1.52
RRI1YDL216C TDA3P38758 523 aa5.57□□□□□ -1.52
RRI1YDL216C BAP3P41815 604 aa5.57□□□□□ -1.52
RRI1YDL216C RET2P43621 546 aa5.57□□□□□ -1.52
RRI1YDL216C SET2P46995 733 aaKnown RBP5.57□□□□□ -1.52
RRI1YDL216C BFA1P47113 574 aa5.57□□□□□ -1.52
RRI1YDL216C YJR096WP47137 282 aa5.57□□□□□ -1.52
RRI1YDL216C CTK1Q03957 528 aaKnown RBP5.57□□□□□ -1.52
RRI1YDL216C YJL163CP46996 555 aa5.56□□□□□ -1.52
RRI1YDL216C DAS1P47005 663 aa5.56□□□□□ -1.52
RRI1YDL216C YGR237CP50089 785 aa5.56□□□□□ -1.52
RRI1YDL216C BRE5P53741 515 aaKnown RBP5.56□□□□□ -1.52
RRI1YDL216C MTQ2Q03920 221 aaPredicted RBP5.56□□□□□ -1.52
RRI1YDL216C OMS1Q06668 471 aa5.56□□□□□ -1.52
RRI1YDL216C DCS2Q12123 353 aa5.56□□□□□ -1.52
RRI1YDL216C YKR075CP36155 307 aa5.55□□□□□ -1.52
RRI1YDL216C HOS4P40480 1083 aa5.55□□□□□ -1.52
RRI1YDL216C HFD1Q04458 532 aa5.55□□□□□ -1.52
RRI1YDL216C CCT3P39077 534 aaKnown RBP5.54□□□□□ -1.52
RRI1YDL216C GZF3P42944 551 aaKnown RBP5.54□□□□□ -1.52
RRI1YDL216C HMO1Q03973 246 aaKnown RBP5.54□□□□□ -1.52
RRI1YDL216C PYC1P11154 1178 aaKnown RBP5.53□□□□□ -1.52
RRI1YDL216C AKL1P38080 1108 aaKnown RBP5.53□□□□□ -1.52
RRI1YDL216C UBP12P39538 1254 aa5.53□□□□□ -1.52
RRI1YDL216C YGR153WP48238 217 aa5.53□□□□□ -1.52
RRI1YDL216C TIM44Q01852 431 aa5.53□□□□□ -1.52
RRI1YDL216C LEE1Q02799 301 aaKnown RBP5.53□□□□□ -1.52
RRI1YDL216C IRC13Q08630 104 aa5.53□□□□□ -1.52
RRI1YDL216C YTM1Q12024 460 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms