RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	PCH2	P38126	564 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	OTU2	P38747	307 aa	Known RBP	7.62	□□□□□ -1.19
UBP13	YBL067C	MID1	P41821	548 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	YNR061C	P53747	219 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	PCL8	Q08966	492 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	DBP3	P20447	523 aa	Known RBP	7.62	□□□□□ -1.19
UBP13	YBL067C	SUI2	P20459	304 aa	Known RBP	7.62	□□□□□ -1.19
UBP13	YBL067C	YER010C	P40011	234 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	SEC28	P40509	296 aa	Known RBP	7.62	□□□□□ -1.19
UBP13	YBL067C	YGR266W	P53326	701 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	NOG1	Q02892	647 aa	Known RBP	7.62	□□□□□ -1.19
UBP13	YBL067C	PEX25	Q02969	394 aa		7.62	□□□□□ -1.19
UBP13	YBL067C	MSH1	P25846	959 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	DBF4	P32325	704 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	KAP122	P32767	1081 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	SFA1	P32771	386 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	DOM34	P33309	386 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	LDH1	P38139	375 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	RVS167	P39743	482 aa	Known RBP	7.61	□□□□□ -1.19
UBP13	YBL067C	STL1	P39932	569 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	BUD16	P39988	312 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	LYS14	P40971	790 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	SMK1	P41808	388 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	FET5	P43561	622 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	SGF73	P53165	657 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	RKM4	Q12504	494 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	YOL159C-A	Q3E769	90 aa		7.61	□□□□□ -1.19
UBP13	YBL067C	ARG3	P05150	338 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	OM45	P16547	393 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	NPP1	P25353	742 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	YCL049C	P25577	312 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	SIF2	P38262	535 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	QDR2	P40474	542 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	EMG1	Q06287	252 aa	Known RBP	7.6	□□□□□ -1.19
UBP13	YBL067C	RSC3	Q06639	885 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	YPR027C	Q12079	277 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	MER1	P16523	270 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	SGF29	P25554	259 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	SLC1	P33333	303 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.6	□□□□□ -1.19	not detected
UBP13	YBL067C	SCD5	P34758	872 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	TEF4	P36008	412 aa	Known RBP	7.6	□□□□□ -1.19
UBP13	YBL067C	UIP5	P36137	443 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	NCL1	P38205	684 aa	Known RBP	7.6	□□□□□ -1.19
UBP13	YBL067C	TIF4631	P39935	952 aa	Known RBP	7.6	□□□□□ -1.19
UBP13	YBL067C	PUG1	P40100	303 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	RSM26	P47141	266 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	LYS4	P49367	693 aa	Predicted RBP	7.6	□□□□□ -1.19
UBP13	YBL067C	TAP42	Q04372	366 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	CSR1	Q06705	408 aa	Known RBP	7.6	□□□□□ -1.19
UBP13	YBL067C	CIR2	Q08822	631 aa		7.6	□□□□□ -1.19
UBP13	YBL067C	MSH3	P25336	1018 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	DID4	P36108	232 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	LAS1	P36146	502 aa	Predicted RBP	7.59	□□□□□ -1.19
UBP13	YBL067C	OSW5	P40219	148 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	AIM20	P40451	204 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	HXT10	P43581	546 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	ASK10	P48361	1146 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	PML39	Q03760	334 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	UFO1	Q04511	668 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	GAD1	Q04792	585 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	DCS2	Q12123	353 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	RTN2	Q12443	393 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	STE6	P12866	1290 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	UTR2	P32623	467 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	7.59	□□□□□ -1.19	not detected
UBP13	YBL067C	ENT3	P47160	408 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	CBK1	P53894	756 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	PEX13	P80667	386 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	HFI1	Q12060	488 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	PSY3	Q12318	242 aa		7.59	□□□□□ -1.19
UBP13	YBL067C	KAR3	P17119	729 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	CCR4	P31384	837 aa	Known RBP	7.58	□□□□□ -1.2
UBP13	YBL067C	PYC2	P32327	1180 aa	Known RBP	7.58	□□□□□ -1.2
UBP13	YBL067C	STE13	P33894	931 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	YKL107W	P34251	309 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	WHI3	P34761	661 aa	Known RBP	7.58	□□□□□ -1.2
UBP13	YBL067C	HSL7	P38274	827 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	EAF5	P39995	279 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	EMP65	P40085	556 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	SET4	P42948	560 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	ZIP2	P53061	704 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	ISU1	Q03020	165 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	MLH2	Q07980	695 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	STE50	P25344	346 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	RPL5	P26321	297 aa	Known RBP	7.58	□□□□□ -1.2
UBP13	YBL067C	HOG1	P32485	435 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	BUD2	P33314	1104 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	RIM11	P38615	370 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	YHR202W	P38887	602 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	LSB1	P53281	241 aa		7.58	□□□□□ -1.2
UBP13	YBL067C	HVG1	P0CE11	249 aa		7.57	□□□□□ -1.2
UBP13	YBL067C	LAT1	P12695	482 aa	Known RBP	7.57	□□□□□ -1.2
UBP13	YBL067C	ADK2	P26364	225 aa		7.57	□□□□□ -1.2
UBP13	YBL067C	PUP2	P32379	260 aa		7.57	□□□□□ -1.2
UBP13	YBL067C	SET3	P36124	751 aa		7.57	□□□□□ -1.2
UBP13	YBL067C	PUS4	P48567	403 aa	Known RBP	7.57	□□□□□ -1.2
UBP13	YBL067C	PSP2	P50109	593 aa	Known RBP	7.57	□□□□□ -1.2
UBP13	YBL067C	DSD1	P53095	428 aa		7.57	□□□□□ -1.2
UBP13	YBL067C	RPN14	P53196	417 aa		7.57	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms