RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YIL108WP40483 696 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W CCT8P47079 568 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W ENP2P48234 707 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W HOL1P53389 586 aa2.55□□□□□ -2
SNC1YAL030W ARP4P80428 489 aa2.55□□□□□ -2
SNC1YAL030W GPD1Q00055 391 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W ECM16Q04217 1267 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W ADY3Q07732 790 aa2.55□□□□□ -2
SNC1YAL030W RPS21BQ3E754 87 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W GLT1Q12680 2145 aaKnown RBP2.54□□□□□ -2
SNC1YAL030W SEC65P29478 273 aa2.54□□□□□ -2
SNC1YAL030W SER1P33330 395 aaKnown RBP2.54□□□□□ -2
SNC1YAL030W MNN4P36044 1178 aa2.54□□□□□ -2
SNC1YAL030W YKR075CP36155 307 aa2.54□□□□□ -2
SNC1YAL030W SIC1P38634 284 aa2.54□□□□□ -2
SNC1YAL030W YHL041WP38730 149 aa2.54□□□□□ -2
SNC1YAL030W YHR078WP38799 552 aa2.54□□□□□ -2
SNC1YAL030W ECM1P39715 212 aa2.54□□□□□ -2
SNC1YAL030W BFA1P47113 574 aa2.54□□□□□ -2
SNC1YAL030W PUS4P48567 403 aaKnown RBP2.54□□□□□ -2
SNC1YAL030W YPL034WQ03083 165 aa2.54□□□□□ -2
SNC1YAL030W SVL3Q03088 825 aaKnown RBP2.54□□□□□ -2
SNC1YAL030W SSL1Q04673 461 aaPredicted RBP2.54□□□□□ -2
SNC1YAL030W GPR1Q12361 961 aa2.54□□□□□ -2
SNC1YAL030W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SNC1YAL030W Q0142Q9ZZW4 58 aa2.54□□□□□ -2
SNC1YAL030W GCD1P09032 578 aaPredicted RBP2.53□□□□□ -2
SNC1YAL030W PHO81P17442 1178 aa2.53□□□□□ -2
SNC1YAL030W ACO1P19414 778 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
SNC1YAL030W HOP1P20050 605 aa2.53□□□□□ -2
SNC1YAL030W HCA4P20448 770 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W PET309P32522 965 aaPredicted RBP2.53□□□□□ -2
SNC1YAL030W STE14P32584 239 aa2.53□□□□□ -2
SNC1YAL030W YKU70P32807 602 aa2.53□□□□□ -2
SNC1YAL030W AKL1P38080 1108 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W APN2P38207 520 aa2.53□□□□□ -2
SNC1YAL030W FAT1P38225 669 aa2.53□□□□□ -2
SNC1YAL030W SRP68P38687 599 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W SSP120P39931 234 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W SAP185P40856 1058 aa2.53□□□□□ -2
SNC1YAL030W QRI7P43122 407 aa2.53□□□□□ -2
SNC1YAL030W IES1P43579 692 aa2.53□□□□□ -2
SNC1YAL030W MET12P46151 657 aa2.53□□□□□ -2
SNC1YAL030W SET2P46995 733 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W SSY5P47002 699 aa2.53□□□□□ -2
SNC1YAL030W BRE5P53741 515 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W ASI2P53895 289 aa2.53□□□□□ -2
SNC1YAL030W NOP15P53927 220 aaPredicted RBP2.53□□□□□ -2
SNC1YAL030W ORC4P54791 529 aa2.53□□□□□ -2
SNC1YAL030W MTD1Q02046 320 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W HLR1Q04429 423 aa2.53□□□□□ -2
SNC1YAL030W BRE1Q07457 700 aaKnown RBP2.53□□□□□ -2
SNC1YAL030W TPO1Q07824 586 aa2.53□□□□□ -2
SNC1YAL030W MCA1Q08601 432 aa2.53□□□□□ -2
SNC1YAL030W PSF3Q12146 194 aa2.53□□□□□ -2
SNC1YAL030W UPC2Q12151 913 aa2.53□□□□□ -2
SNC1YAL030W ARP7Q12406 477 aa2.53□□□□□ -2
SNC1YAL030W CYC1P00044 109 aaPredicted RBP2.52□□□□□ -2.01
SNC1YAL030W CYC7P00045 113 aa2.52□□□□□ -2.01
SNC1YAL030W RPS17AP02407 136 aaKnown RBP2.52□□□□□ -2.01
SNC1YAL030W GAL10P04397 699 aa2.52□□□□□ -2.01
SNC1YAL030W MSS18P08593 268 aa2.52□□□□□ -2.01
SNC1YAL030W RPS17BP14127 136 aaKnown RBP2.52□□□□□ -2.01
SNC1YAL030W CDC26P14724 124 aa2.52□□□□□ -2.01
SNC1YAL030W CMP2P14747 604 aa2.52□□□□□ -2.01
SNC1YAL030W PHO3P24031 467 aa2.52□□□□□ -2.01
SNC1YAL030W SED4P25365 1065 aa2.52□□□□□ -2.01
SNC1YAL030W YKL222CP35995 705 aa2.52□□□□□ -2.01
SNC1YAL030W KTR4P38131 464 aa2.52□□□□□ -2.01
SNC1YAL030W SAW1P39735 261 aa2.52□□□□□ -2.01
SNC1YAL030W PZF1P39933 429 aa2.52□□□□□ -2.01
SNC1YAL030W ACA1P39970 489 aa2.52□□□□□ -2.01
SNC1YAL030W HIS6P40545 261 aa2.52□□□□□ -2.01
SNC1YAL030W PFA3P42836 336 aa2.52□□□□□ -2.01
SNC1YAL030W IRC5P43610 853 aa2.52□□□□□ -2.01
SNC1YAL030W NSE5Q03718 556 aa2.52□□□□□ -2.01
SNC1YAL030W ECM38Q05902 660 aaPredicted RBP2.52□□□□□ -2.01
SNC1YAL030W YLR407WQ06070 228 aa2.52□□□□□ -2.01
SNC1YAL030W MCM21Q06675 368 aa2.52□□□□□ -2.01
SNC1YAL030W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SNC1YAL030W KCS1Q12494 1050 aa2.52□□□□□ -2.01
SNC1YAL030W HIS5P07172 385 aa2.51□□□□□ -2.01
SNC1YAL030W PFK1P16861 987 aaKnown RBP2.51□□□□□ -2.01
SNC1YAL030W MSM1P22438 575 aa2.51□□□□□ -2.01
SNC1YAL030W SSH4P32343 579 aa2.51□□□□□ -2.01
SNC1YAL030W MF(ALPHA)2P32435 120 aa2.51□□□□□ -2.01
SNC1YAL030W HXT4P32467 576 aa2.51□□□□□ -2.01
SNC1YAL030W NGG1P32494 702 aa2.51□□□□□ -2.01
SNC1YAL030W APL2P36000 726 aaPredicted RBP2.51□□□□□ -2.01
SNC1YAL030W SDS22P36047 338 aa2.51□□□□□ -2.01
SNC1YAL030W TAF5P38129 798 aa2.51□□□□□ -2.01
SNC1YAL030W YLF2P38746 405 aa2.51□□□□□ -2.01
SNC1YAL030W VID28P40547 921 aa2.51□□□□□ -2.01
SNC1YAL030W CHA4P43634 648 aa2.51□□□□□ -2.01
SNC1YAL030W MTR3P48240 250 aaPredicted RBP2.51□□□□□ -2.01
SNC1YAL030W ASK10P48361 1146 aa2.51□□□□□ -2.01
SNC1YAL030W YBP2P53169 641 aa2.51□□□□□ -2.01
SNC1YAL030W YGR130CP53278 816 aa2.51□□□□□ -2.01
SNC1YAL030W VPS62P53285 467 aa2.51□□□□□ -2.01
SNC1YAL030W SNO2P53823 222 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms