RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 RILPL2Q969X0 211 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
CAPN3-221ENST00000638141 UTP14AQ9BVJ6 771 aaKnown RBP13.97□□□□□ -0.17
CAPN3-221ENST00000638141 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 STRCQ7RTU9 1775 aa13.97□□□□□ -0.17
CAPN3-221ENST00000638141 APBB1O00213 710 aa13.96□□□□□ -0.17
CAPN3-221ENST00000638141 NBPF11Q86T75 865 aa13.96□□□□□ -0.17
CAPN3-221ENST00000638141 SPATA32Q96LK8 384 aa13.96□□□□□ -0.17
CAPN3-221ENST00000638141 A1CFQ9NQ94 594 aaKnown RBP13.96□□□□□ -0.17
CAPN3-221ENST00000638141 RAI14Q9P0K7 980 aa13.96□□□□□ -0.17
CAPN3-221ENST00000638141 VPS37CA5D8V6 355 aaPredicted RBP13.96□□□□□ -0.18
CAPN3-221ENST00000638141 SRGAP3O43295 1099 aa13.96□□□□□ -0.18
CAPN3-221ENST00000638141 IL13P35225 146 aa13.96□□□□□ -0.18
CAPN3-221ENST00000638141 APOBRQ0VD83 1088 aa13.96□□□□□ -0.18
CAPN3-221ENST00000638141 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.18
CAPN3-221ENST00000638141 TMEM132EQ6IEE7 984 aa13.96□□□□□ -0.18
CAPN3-221ENST00000638141 DHX40Q8IX18 779 aaKnown RBP13.96□□□□□ -0.18
CAPN3-221ENST00000638141 LSG1Q9H089 658 aaKnown RBP13.96□□□□□ -0.18
CAPN3-221ENST00000638141 EID1Q9Y6B2 187 aa13.96□□□□□ -0.18
CAPN3-221ENST00000638141 MAP2P11137 1827 aaKnown RBP13.96□□□□□ -0.18
CAPN3-221ENST00000638141 NRKQ7Z2Y5 1582 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 CCDC189A1A4V9 331 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 NR1I2O75469 434 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 TDO2P48775 406 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 C11orf57Q6ZUT1 292 aaPredicted RBP13.95□□□□□ -0.18
CAPN3-221ENST00000638141 STAG1Q8WVM7 1258 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 ANO10Q9NW15 660 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 BECN2A8MW95 431 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 PPFIA4O75335 1185 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 EIF3JO75822 258 aaKnown RBP13.95□□□□□ -0.18
CAPN3-221ENST00000638141 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.18
CAPN3-221ENST00000638141 LONRF2Q1L5Z9 754 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 CCDC83Q8IWF9 413 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 CCDC34Q96HJ3 373 aa13.95□□□□□ -0.18
CAPN3-221ENST00000638141 CHL1O00533 1208 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 C21orf2O43822 256 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 LARGE1O95461 756 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 ATP8B2P98198 1209 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 ERC1Q8IUD2 1116 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 USP5P45974 858 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 TUBB4BP68371 445 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 MAP3K9P80192 1104 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 ST3GAL1Q11201 340 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
CAPN3-221ENST00000638141 ARMCX5Q6P1M9 558 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 ZSWIM6Q9HCJ5 1215 aa13.94□□□□□ -0.18
CAPN3-221ENST00000638141 POTEB2H3BUK9 544 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 E2F4Q16254 413 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 EP400NLQ6ZTU2 488 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 HOMER1Q86YM7 354 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 BPIFA3Q9BQP9 254 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 NAT10Q9H0A0 1025 aaKnown RBP13.93□□□□□ -0.18
CAPN3-221ENST00000638141 ALDH8A1Q9H2A2 487 aaPredicted RBP13.93□□□□□ -0.18
CAPN3-221ENST00000638141 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 ADCY9O60503 1353 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 GOLGA6L9A6NEM1 432 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 HDGFP51858 240 aaKnown RBP13.93□□□□□ -0.18
CAPN3-221ENST00000638141 CEP57L1Q8IYX8 460 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 PGBD1Q96JS3 809 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 PARD6BQ9BYG5 372 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 RBM28Q9NW13 759 aaKnown RBP13.93□□□□□ -0.18
CAPN3-221ENST00000638141 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
CAPN3-221ENST00000638141 KIF3CO14782 793 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 URI1O94763 535 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-221ENST00000638141 KRT24Q2M2I5 525 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 LRRC31Q6UY01 552 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 CDC37L1Q7L3B6 337 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 HDXQ7Z353 690 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 FAM71BQ8TC56 605 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 DNAAF4Q8WXU2 420 aa13.92□□□□□ -0.18
CAPN3-221ENST00000638141 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
CAPN3-221ENST00000638141 PPP1R12AO14974 1030 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-221ENST00000638141 CALRP27797 417 aaKnown RBP13.91□□□□□ -0.18
CAPN3-221ENST00000638141 TXLNAP40222 546 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 DNAJC21Q5F1R6 531 aaKnown RBP13.91□□□□□ -0.18
CAPN3-221ENST00000638141 CNTROBQ8N137 903 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 BICD2Q8TD16 824 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 GOLGA1Q92805 767 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 IL25Q9H293 177 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 VPS18Q9P253 973 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 CHMP3Q9Y3E7 222 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 MRFAP1Q9Y605 127 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 ANKRD1Q15327 319 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 FOXR1Q6PIV2 292 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
CAPN3-221ENST00000638141 XRN1Q8IZH2 1706 aaKnown RBP13.91□□□□□ -0.18
CAPN3-221ENST00000638141 USP42Q9H9J4 1324 aaKnown RBP13.91□□□□□ -0.18
CAPN3-221ENST00000638141 ZSCAN12O43309 604 aa13.9□□□□□ -0.18
CAPN3-221ENST00000638141 PPP2R3AQ06190 1150 aa13.9□□□□□ -0.18
CAPN3-221ENST00000638141 GORABQ5T7V8 394 aa13.9□□□□□ -0.18
CAPN3-221ENST00000638141 FANCGO15287 622 aa13.9□□□□□ -0.18
CAPN3-221ENST00000638141 HMOX1P09601 288 aa13.9□□□□□ -0.18
CAPN3-221ENST00000638141 CCDC30Q5VVM6 783 aa13.9□□□□□ -0.18
CAPN3-221ENST00000638141 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
CAPN3-221ENST00000638141 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms