RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 NYAP1Q6ZVC0 841 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 IFNL1Q8IU54 200 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 SMAP1Q8IYB5 467 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-213ENST00000630925 NUDT16Q96DE0 195 aaKnown RBP5.93□□□□□ -1.46
SDCBP-213ENST00000630925 FBXO2Q9UK22 296 aaPredicted RBP5.93□□□□□ -1.46
SDCBP-213ENST00000630925 SPG7Q9UQ90 795 aa5.93□□□□□ -1.46
SDCBP-213ENST00000630925 PCF11O94913 1555 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 HMMRO75330 724 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 DKK1O94907 266 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 RAB33AQ14088 237 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 TAF11Q15544 211 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 DUSP27Q5VZP5 1158 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 LRP10Q7Z4F1 713 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 NBPF5PQ86XG9 351 aaPredicted RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 LMNTD2Q8IXW0 634 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 PLPP6Q8IY26 295 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 NDUFAF2Q8N183 169 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 PPHLN1Q8NEY8 458 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 TRPM4Q8TD43 1214 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 CCDC47Q96A33 483 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 CRELD1Q96HD1 420 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 ZBTB3Q9H5J0 574 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 NEUROD4Q9HD90 331 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 GTF2A1LQ9UNN4 478 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 ADGRG1Q9Y653 693 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 PRDM2Q13029 1718 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 ORC4O43929 436 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 ST13P50502 369 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 RAB27AP51159 221 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 SQSTM1Q13501 440 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 NBPF10Q6P3W6 841 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 SLC4A10Q6U841 1118 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 CAPN12Q6ZSI9 719 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 C16orf86Q6ZW13 317 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 HELQQ8TDG4 1101 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 ANP32BQ92688 251 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 SKA1Q96BD8 255 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 TRMT2BQ96GJ1 504 aaKnown RBP5.92□□□□□ -1.46
SDCBP-213ENST00000630925 KMT5AQ9NQR1 393 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 NOD1Q9Y239 953 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 DAAM1Q9Y4D1 1078 aa5.92□□□□□ -1.46
SDCBP-213ENST00000630925 DNMBPQ6XZF7 1577 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 TDRD9Q8NDG6 1382 aaKnown RBP5.91□□□□□ -1.46
SDCBP-213ENST00000630925 WASHC2CQ9Y4E1 1318 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 VAMP4O75379 141 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 PLCG2P16885 1265 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 PMLP29590 882 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 SARSP49591 514 aaKnown RBP5.91□□□□□ -1.46
SDCBP-213ENST00000630925 CLDN10P78369 228 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 HSP90AB3PQ58FF7 597 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 ZC3H12AQ5D1E8 599 aaKnown RBP5.91□□□□□ -1.46
SDCBP-213ENST00000630925 ANKS3Q6ZW76 656 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 DDX42Q86XP3 938 aaKnown RBP eCLIP5.91□□□□□ -1.46
SDCBP-213ENST00000630925 NUTM1Q86Y26 1132 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 CPXCR1Q8N123 301 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 RASGRP4Q8TDF6 673 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 GPRASP2Q96D09 838 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 CDHR1Q96JP9 859 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 GPR101Q96P66 508 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-213ENST00000630925 SELENOOQ9BVL4 669 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 RIC8AQ9NPQ8 531 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 POLA1P09884 1462 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-213ENST00000630925 SHROOM2Q13796 1616 aa5.91□□□□□ -1.46
SDCBP-213ENST00000630925 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 hCG_1984214I3L0E3 225 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 FIBPO43427 364 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 PIP5K1CO60331 668 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 NPR3P17342 541 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 VARSP26640 1264 aaKnown RBP5.9□□□□□ -1.46
SDCBP-213ENST00000630925 SEPT2Q15019 361 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 RC3H1Q5TC82 1133 aaKnown RBP5.9□□□□□ -1.46
SDCBP-213ENST00000630925 PDXDC2PQ6P474 469 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 OGFOD1Q8N543 542 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 TMEM87BQ96K49 555 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 C9orf78Q9NZ63 289 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-213ENST00000630925 ZIM2Q9NZV7 527 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 TRIM35Q9UPQ4 493 aa5.9□□□□□ -1.46
SDCBP-213ENST00000630925 PABPN1LA6NDY0 278 aaKnown RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 ALG1L2C9J202 215 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 AKAP10O43572 662 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 DIAPH1O60610 1272 aaKnown RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 F2P00734 622 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 EPB42P16452 691 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 ETFBP38117 255 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 IRX3P78415 501 aaPredicted RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 PLCB3Q01970 1234 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 EN1Q05925 392 aaPredicted RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 FAM133BQ5BKY9 247 aaKnown RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 CC2D1BQ5T0F9 858 aaKnown RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 ANKRD13BQ86YJ7 626 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 ANKRD42Q8N9B4 389 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 NELL1Q92832 810 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 TRIM52Q96A61 297 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 PGBD4Q96DM1 585 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 MPP4Q96JB8 637 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 DNAJC7Q99615 494 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 SRRTQ9BXP5 876 aaKnown RBP5.9□□□□□ -1.47
SDCBP-213ENST00000630925 CD248Q9HCU0 757 aa5.9□□□□□ -1.47
SDCBP-213ENST00000630925 TRPC6Q9Y210 931 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms