RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SLC3A2P08195 630 aaKnown RBP14.96□□□□□ -0.01
MSH6-215ENST00000622629 SFPQP23246 707 aaKnown RBP eCLIP14.96□□□□□ -0.01
MSH6-215ENST00000622629 ATP2B3Q16720 1220 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 DHX32Q7L7V1 743 aaKnown RBP14.96□□□□□ -0.01
MSH6-215ENST00000622629 NCOA7Q8NI08 942 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
MSH6-215ENST00000622629 PTPRMP28827 1452 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 MAP3K12Q12852 859 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 CDC37L1Q7L3B6 337 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 PTPDC1A2A3K4 754 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 IPO7O95373 1038 aaKnown RBP14.96□□□□□ -0.01
MSH6-215ENST00000622629 STX1AQ16623 288 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 C17orf53Q8N3J3 647 aaPredicted RBP14.96□□□□□ -0.01
MSH6-215ENST00000622629 ZMYND15Q9H091 742 aa14.96□□□□□ -0.01
MSH6-215ENST00000622629 JAK2O60674 1132 aa14.96□□□□□ -0.02
MSH6-215ENST00000622629 NCOA5Q9HCD5 579 aaKnown RBP14.96□□□□□ -0.02
MSH6-215ENST00000622629 ARHGEF40Q8TER5 1519 aa14.95□□□□□ -0.02
MSH6-215ENST00000622629 GOLGA8AA7E2F4 631 aa14.95□□□□□ -0.02
MSH6-215ENST00000622629 SLC12A7Q9Y666 1083 aa14.95□□□□□ -0.02
MSH6-215ENST00000622629 CPSF1Q10570 1443 aaKnown RBP14.95□□□□□ -0.02
MSH6-215ENST00000622629 NEURL1BA8MQ27 555 aa14.95□□□□□ -0.02
MSH6-215ENST00000622629 FAM89AQ96GI7 184 aa14.95□□□□□ -0.02
MSH6-215ENST00000622629 NSFL1CQ9UNZ2 370 aaKnown RBP14.95□□□□□ -0.02
MSH6-215ENST00000622629 SLC9C2Q5TAH2 1124 aa14.95□□□□□ -0.02
MSH6-215ENST00000622629 HELBQ8NG08 1087 aaPredicted RBP14.95□□□□□ -0.02
MSH6-215ENST00000622629 SEC62Q99442 399 aaKnown RBP14.95□□□□□ -0.02
MSH6-215ENST00000622629 LSG1Q9H089 658 aaKnown RBP14.95□□□□□ -0.02
MSH6-215ENST00000622629 SMTNL1A8MU46 457 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 PRDM10Q9NQV6 1147 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 PTGS1P23219 599 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 IARSP41252 1262 aaKnown RBP14.94□□□□□ -0.02
MSH6-215ENST00000622629 METAP2P50579 478 aaKnown RBP eCLIP14.94□□□□□ -0.02
MSH6-215ENST00000622629 TMEM67Q5HYA8 995 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 ARGLU1Q9NWB6 273 aaPredicted RBP14.94□□□□□ -0.02
MSH6-215ENST00000622629 IQSEC3Q9UPP2 1182 aaPredicted RBP14.94□□□□□ -0.02
MSH6-215ENST00000622629 MED14O60244 1454 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 TLR7Q9NYK1 1049 aaKnown RBP14.94□□□□□ -0.02
MSH6-215ENST00000622629 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
MSH6-215ENST00000622629 PRC1O43663 620 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 MARCKSP29966 332 aaPredicted RBP14.93□□□□□ -0.02
MSH6-215ENST00000622629 CBX1P83916 185 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 PPP1R9BQ96SB3 815 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 RNF113AO15541 343 aaKnown RBP14.93□□□□□ -0.02
MSH6-215ENST00000622629 KLHL10Q6JEL2 608 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 CCDC47Q96A33 483 aaKnown RBP14.93□□□□□ -0.02
MSH6-215ENST00000622629 TPCN1Q9ULQ1 816 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 NEXMIFQ5QGS0 1516 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 CUL4AQ13619 759 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 SSH2Q76I76 1423 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 SETD1BQ9UPS6 1966 aaKnown RBP14.93□□□□□ -0.02
MSH6-215ENST00000622629 DYNC1I1O14576 645 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 RXRAP19793 462 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
MSH6-215ENST00000622629 FILIP1LQ4L180 1135 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 MTMR6Q9Y217 621 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 ZFYP08048 801 aaPredicted RBP14.92□□□□□ -0.02
MSH6-215ENST00000622629 TMC6Q7Z403 805 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 SLC26A6Q9BXS9 759 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 EXOC5O00471 708 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
MSH6-215ENST00000622629 SLC5A1P13866 664 aa14.92□□□□□ -0.02
MSH6-215ENST00000622629 EYA2O00167 538 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 HSP90AA4PQ58FG1 418 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 OTUD7BQ6GQQ9 843 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 MRPS27Q92552 414 aaKnown RBP14.91□□□□□ -0.02
MSH6-215ENST00000622629 WASF1Q92558 559 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 AGLP35573 1532 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 EPB41L2O43491 1005 aaKnown RBP14.91□□□□□ -0.02
MSH6-215ENST00000622629 CLSTN1O94985 981 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 GOLGA6L1Q8N7Z2 621 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 KBTBD3Q8NAB2 608 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 TEX13AQ9BXU3 409 aaPredicted RBP14.91□□□□□ -0.02
MSH6-215ENST00000622629 RGS12O14924 1447 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 CAMSAP1Q5T5Y3 1602 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 CBFA2T2O43439 604 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 ARHGEF25Q86VW2 580 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 AOPEPQ8N6M6 819 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 ZSWIM6Q9HCJ5 1215 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 IL2RBP14784 551 aa14.91□□□□□ -0.02
MSH6-215ENST00000622629 KIAA1210Q9ULL0 1709 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 PI4K2BQ8TCG2 481 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 LEO1Q8WVC0 666 aaPredicted RBP14.9□□□□□ -0.02
MSH6-215ENST00000622629 PRIMPOLQ96LW4 560 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 C8orf37Q96NL8 207 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 KDRP35968 1356 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 CAVIN2O95810 425 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 PPFIBP1Q86W92 1011 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 KIF18AQ8NI77 898 aa14.9□□□□□ -0.02
MSH6-215ENST00000622629 SSRP1Q08945 709 aaKnown RBP14.9□□□□□ -0.02
MSH6-215ENST00000622629 TTF1Q15361 905 aaPredicted RBP14.9□□□□□ -0.02
MSH6-215ENST00000622629 TXLNAP40222 546 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 A0A1B0GVL5 298 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 ZBTB43O43298 467 aa14.89□□□□□ -0.03
MSH6-215ENST00000622629 LARGE1O95461 756 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms