RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 CHRNA2Q15822 529 aa12.62□□□□□ -0.39
PCDH15-228ENST00000615043 SIX5Q8N196 739 aa12.62□□□□□ -0.39
PCDH15-228ENST00000615043 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
PCDH15-228ENST00000615043 PRDM11Q9NQV5 511 aa12.62□□□□□ -0.39
PCDH15-228ENST00000615043 COL14A1Q05707 1796 aaKnown RBP12.61□□□□□ -0.39
PCDH15-228ENST00000615043 DKK1O94907 266 aa12.61□□□□□ -0.39
PCDH15-228ENST00000615043 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
PCDH15-228ENST00000615043 RBM19Q9Y4C8 960 aaKnown RBP12.6□□□□□ -0.39
PCDH15-228ENST00000615043 FAM208AQ9UK61 1670 aaKnown RBP12.6□□□□□ -0.39
PCDH15-228ENST00000615043 RGPD2P0DJD1 1756 aa12.59□□□□□ -0.39
PCDH15-228ENST00000615043 SEC13P55735 322 aa12.59□□□□□ -0.39
PCDH15-228ENST00000615043 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCDH15-228ENST00000615043 NBPF20Q3BBV1 942 aa12.59□□□□□ -0.39
PCDH15-228ENST00000615043 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
PCDH15-228ENST00000615043 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
PCDH15-228ENST00000615043 C1QTNF2Q9BXJ5 285 aa12.59□□□□□ -0.39
PCDH15-228ENST00000615043 PLCH1Q4KWH8 1693 aa12.58□□□□□ -0.4
PCDH15-228ENST00000615043 CAMTA1Q9Y6Y1 1673 aa12.58□□□□□ -0.4
PCDH15-228ENST00000615043 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
PCDH15-228ENST00000615043 HMOX1P09601 288 aa12.58□□□□□ -0.4
PCDH15-228ENST00000615043 COL5A2P05997 1499 aaPredicted RBP12.58□□□□□ -0.4
PCDH15-228ENST00000615043 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
PCDH15-228ENST00000615043 SENP3-EIF4A1A0A087X0R7 540 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 ESPNB1AK53 854 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 SERPINB4P48594 390 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 SH3BP2P78314 561 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 SULT6B1Q6IMI4 303 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 PCDHB11Q9Y5F2 797 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 PCDHGA11Q9Y5H2 935 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 SPATA31A6Q5VVP1 1343 aa12.57□□□□□ -0.4
PCDH15-228ENST00000615043 LRP6O75581 1613 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 FAM83GA6ND36 823 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 PRMT3O60678 531 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 USP4Q13107 963 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 C1orf216Q8TAB5 229 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 CDV3Q9UKY7 258 aaKnown RBP12.56□□□□□ -0.4
PCDH15-228ENST00000615043 MAPK8IP3Q9UPT6 1336 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 KDRP35968 1356 aa12.56□□□□□ -0.4
PCDH15-228ENST00000615043 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 SOWAHDA6NJG2 315 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 SFI1A8K8P3 1242 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 SCNN1AP37088 669 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 CCDC125Q86Z20 511 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
PCDH15-228ENST00000615043 SEPT12Q8IYM1 358 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
PCDH15-228ENST00000615043 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
PCDH15-228ENST00000615043 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
PCDH15-228ENST00000615043 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
PCDH15-228ENST00000615043 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
PCDH15-228ENST00000615043 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
PCDH15-228ENST00000615043 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
PCDH15-228ENST00000615043 APAF1O14727 1248 aa12.53□□□□□ -0.4
PCDH15-228ENST00000615043 NEFMP07197 916 aa12.53□□□□□ -0.4
PCDH15-228ENST00000615043 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
PCDH15-228ENST00000615043 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
PCDH15-228ENST00000615043 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
PCDH15-228ENST00000615043 E9PSI1 815 aa12.52□□□□□ -0.41
PCDH15-228ENST00000615043 EVA1CP58658 441 aa12.52□□□□□ -0.41
PCDH15-228ENST00000615043 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
PCDH15-228ENST00000615043 CXXC1Q9P0U4 656 aaPredicted RBP12.52□□□□□ -0.41
PCDH15-228ENST00000615043 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
PCDH15-228ENST00000615043 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
PCDH15-228ENST00000615043 RAB15P59190 212 aa12.51□□□□□ -0.41
PCDH15-228ENST00000615043 OCLNQ16625 522 aa12.51□□□□□ -0.41
PCDH15-228ENST00000615043 MEX3CQ5U5Q3 659 aaKnown RBP12.51□□□□□ -0.41
PCDH15-228ENST00000615043 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
PCDH15-228ENST00000615043 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
PCDH15-228ENST00000615043 C8orf37Q96NL8 207 aa12.51□□□□□ -0.41
PCDH15-228ENST00000615043 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
PCDH15-228ENST00000615043 SLIT2O94813 1529 aa12.51□□□□□ -0.41
PCDH15-228ENST00000615043 ZBTB24O43167 697 aaPredicted RBP12.5□□□□□ -0.41
PCDH15-228ENST00000615043 TAS1R3Q7RTX0 852 aa12.5□□□□□ -0.41
PCDH15-228ENST00000615043 PHACTR3Q96KR7 559 aa12.5□□□□□ -0.41
PCDH15-228ENST00000615043 KCTD15Q96SI1 283 aaPredicted RBP12.5□□□□□ -0.41
PCDH15-228ENST00000615043 CRB1P82279 1406 aa12.5□□□□□ -0.41
PCDH15-228ENST00000615043 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
PCDH15-228ENST00000615043 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
PCDH15-228ENST00000615043 HINFPQ9BQA5 517 aa12.49□□□□□ -0.41
PCDH15-228ENST00000615043 MEGF6O75095 1541 aa12.48□□□□□ -0.41
PCDH15-228ENST00000615043 LGR5O75473 907 aa12.48□□□□□ -0.41
PCDH15-228ENST00000615043 TMPOP42166 694 aaKnown RBP12.48□□□□□ -0.41
PCDH15-228ENST00000615043 NFE2L2Q16236 605 aa12.48□□□□□ -0.41
PCDH15-228ENST00000615043 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
PCDH15-228ENST00000615043 DLG5Q8TDM6 1919 aa12.48□□□□□ -0.41
PCDH15-228ENST00000615043 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
PCDH15-228ENST00000615043 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.48□□□□□ -0.41
PCDH15-228ENST00000615043 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
PCDH15-228ENST00000615043 RAPGEF4Q8WZA2 1011 aa12.47□□□□□ -0.41
PCDH15-228ENST00000615043 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
PCDH15-228ENST00000615043 VARSP26640 1264 aaKnown RBP12.46□□□□□ -0.41
PCDH15-228ENST00000615043 RIPK4P57078 832 aa12.46□□□□□ -0.41
PCDH15-228ENST00000615043 TRIM32Q13049 653 aa12.46□□□□□ -0.41
PCDH15-228ENST00000615043 MTHFSDQ2M296 383 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms