RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 STMN1P16949 149 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 TAOK1Q7L7X3 1001 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 CCDC26Q8TAB7 109 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 IL16Q14005 1332 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 ARAP1Q96P48 1450 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 PCK1P35558 622 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 NCOA7Q8NI08 942 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 CNNM2Q9H8M5 875 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 TTC22Q5TAA0 569 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 RABGAP1Q9Y3P9 1069 aa21.93■■□□□ 1.1
HDAC4-215ENST00000543185 IRX4P78413 519 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-215ENST00000543185 BIN1O00499 593 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 ZBTB17Q13105 803 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 ASXL1Q8IXJ9 1541 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 XRCC6P12956 609 aaKnown RBP eCLIP21.92■■□□□ 1.1
HDAC4-215ENST00000543185 MTUS1Q9ULD2 1270 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 IFIT3O14879 490 aaKnown RBP21.92■■□□□ 1.1
HDAC4-215ENST00000543185 GSTA5Q7RTV2 222 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 IL1RAPL2Q9NP60 686 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 IFIT5Q13325 482 aaKnown RBP21.92■■□□□ 1.1
HDAC4-215ENST00000543185 ZSCAN29Q8IWY8 852 aaPredicted RBP21.92■■□□□ 1.1
HDAC4-215ENST00000543185 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
HDAC4-215ENST00000543185 PRAM1Q96QH2 718 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 ZSWIM4Q9H7M6 989 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 DRC1Q96MC2 740 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 TCHPQ9BT92 498 aa21.92■■□□□ 1.1
HDAC4-215ENST00000543185 CCDC42Q96M95 316 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 TRPC3Q13507 836 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 MFSD6Q6ZSS7 791 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 KRT23Q9C075 422 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 INPP5BP32019 993 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 CCDC62Q6P9F0 684 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 BCAP29Q9UHQ4 241 aa21.91■■□□□ 1.1
HDAC4-215ENST00000543185 ACTN4O43707 911 aaKnown RBP21.9■■□□□ 1.1
HDAC4-215ENST00000543185 ATP2C2O75185 946 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 CALCOCO2Q13137 446 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 WHAMMP3Q1A5X7 153 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 NUTM1Q86Y26 1132 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 POLR3DP05423 398 aaPredicted RBP21.9■■□□□ 1.1
HDAC4-215ENST00000543185 AFAP1L2Q8N4X5 818 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.9■■□□□ 1.1
HDAC4-215ENST00000543185 LUC7L3O95232 432 aaKnown RBP21.9■■□□□ 1.1
HDAC4-215ENST00000543185 NEDD9Q14511 834 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 KRBA2Q6ZNG9 492 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
HDAC4-215ENST00000543185 PLCB1Q9NQ66 1216 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 PPP1R2P41236 205 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 NUF2Q9BZD4 464 aa21.9■■□□□ 1.1
HDAC4-215ENST00000543185 TYRO3Q06418 890 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 SSH1Q8WYL5 1049 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 ECHDC1Q9NTX5 307 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 NPHP3Q7Z494 1330 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 IQGAP2Q13576 1575 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 CLNS1AP54105 237 aaKnown RBP21.89■■□□□ 1.1
HDAC4-215ENST00000543185 MAP7Q14244 749 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 SELENOSQ9BQE4 189 aa21.89■■□□□ 1.1
HDAC4-215ENST00000543185 INTS4Q96HW7 963 aaKnown RBP21.89■■□□□ 1.09
HDAC4-215ENST00000543185 MRPS9P82933 396 aaKnown RBP21.89■■□□□ 1.09
HDAC4-215ENST00000543185 ZNF365Q70YC5 407 aa21.89■■□□□ 1.09
HDAC4-215ENST00000543185 ZNF444Q8N0Y2 327 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-215ENST00000543185 GABPB2Q8TAK5 448 aaPredicted RBP21.89■■□□□ 1.09
HDAC4-215ENST00000543185 TMEM67Q5HYA8 995 aa21.89■■□□□ 1.09
HDAC4-215ENST00000543185 SNX16P57768 344 aa21.89■■□□□ 1.09
HDAC4-215ENST00000543185 PPFIA1Q13136 1202 aa21.89■■□□□ 1.09
HDAC4-215ENST00000543185 GBP7Q8N8V2 638 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-215ENST00000543185 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 MINDY4BA8MYZ0 360 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 CRACR2BQ8N4Y2 399 aaPredicted RBP21.88■■□□□ 1.09
HDAC4-215ENST00000543185 CCDC63Q8NA47 563 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 RAD50Q92878 1312 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 MAP3K21Q5TCX8 1036 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 SEC62Q99442 399 aaKnown RBP21.88■■□□□ 1.09
HDAC4-215ENST00000543185 IMPG2Q9BZV3 1241 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 PPFIA2O75334 1257 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 GAS8O95995 478 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 RUFY4Q6ZNE9 571 aa21.88■■□□□ 1.09
HDAC4-215ENST00000543185 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 ABCF2Q9UG63 623 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 BRAPQ7Z569 592 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 NCOA1Q15788 1441 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 TTC21BQ7Z4L5 1316 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 NUCB1Q02818 461 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 NEK1Q96PY6 1258 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 GOLGA6CA6NDK9 693 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 GOLGA6DP0CG33 693 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 APBB1IPQ7Z5R6 666 aaPredicted RBP21.87■■□□□ 1.09
HDAC4-215ENST00000543185 IFT20Q8IY31 132 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 GOLGA6AQ9NYA3 693 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 UTP11Q9Y3A2 253 aaKnown RBP21.87■■□□□ 1.09
HDAC4-215ENST00000543185 CEP85LQ5SZL2 805 aa21.87■■□□□ 1.09
HDAC4-215ENST00000543185 RANBP6O60518 1105 aaKnown RBP21.87■■□□□ 1.09
HDAC4-215ENST00000543185 SPTY2D1Q68D10 685 aaPredicted RBP21.87■■□□□ 1.09
HDAC4-215ENST00000543185 TMX1Q9H3N1 280 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 VCX3AQ9NNX9 186 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 SERPINA10Q9UK55 444 aa21.86■■□□□ 1.09
HDAC4-215ENST00000543185 WDHD1O75717 1129 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms