RNA–Protein interactions for RNA: ENST00000536226.1

CRNKL1-207, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRNKL1, Length 4,009 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-207ENST00000536226 ST7Q9NRC1 585 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 PAIP2BQ9ULR5 123 aaKnown RBP9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 CCDC189A1A4V9 331 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 PTGS1P23219 599 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 RPS6KA3P51812 740 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 TSC22D3Q99576 134 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 UTP6Q9NYH9 597 aaKnown RBP9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 PSD3Q9NYI0 1048 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 ENO4A6NNW6 628 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 PFDN1O60925 122 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 B4GALNT2Q8NHY0 566 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 ADAM21Q9UKJ8 722 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 TRAK1Q9UPV9 953 aa9.28□□□□□ -0.92
CRNKL1-207ENST00000536226 A2ML1A8K2U0 1454 aa9.27□□□□□ -0.92
CRNKL1-207ENST00000536226 EPB41L2O43491 1005 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 SASH1O94885 1247 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 OATP04181 439 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 PECAM1P16284 738 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 GJA8P48165 433 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 PSMD7P51665 324 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 HDXQ7Z353 690 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 LARP6Q9BRS8 491 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 UBAP1Q9NZ09 502 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 ZSCAN12O43309 604 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 HNRNPH1P31943 449 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 SNCBQ16143 134 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 NUTM2GQ5VZR2 741 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 CAPRIN2Q6IMN6 1127 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 KIAA0825Q8IV33 1275 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 TRIM11Q96F44 468 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 NRKQ7Z2Y5 1582 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 MARF1Q9Y4F3 1742 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 NLRP1Q9C000 1473 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 BUB1BO60566 1050 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 ZFXP17010 805 aaPredicted RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 NUCB1Q02818 461 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 TMED1Q13445 227 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 TDRD7Q8NHU6 1098 aaKnown RBP9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 TBC1D31Q96DN5 1066 aa9.27□□□□□ -0.93
CRNKL1-207ENST00000536226 ERCC6LQ2NKX8 1250 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 OGFOD1Q8N543 542 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 AFAP1L1Q8TED9 768 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 CARD11Q9BXL7 1154 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 LCMT1Q9UIC8 334 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 PDE3AQ14432 1141 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 CEP128Q6ZU80 1094 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 SPATS2Q86XZ4 545 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 PAF1Q8N7H5 531 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 FER1L4A9Z1Z3 1794 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 AKAP12Q02952 1782 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 CLCN6P51797 869 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 DYNC1I2Q13409 638 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 SEPT7Q16181 437 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 CCDC57Q2TAC2 916 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 DDX27Q96GQ7 796 aaKnown RBP9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 HOMER3Q9NSC5 361 aa9.26□□□□□ -0.93
CRNKL1-207ENST00000536226 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 CAVIN2O95810 425 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 CUL3Q13618 768 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 IL16Q14005 1332 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 DYTNA2CJ06 578 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 LMBRD1Q9NUN5 540 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 PYCARDQ9ULZ3 195 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 KANK1Q14678 1352 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 RBM47A0AV96 593 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 ANKRD65E5RJM6 399 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 SGSM2O43147 1006 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 LUC7L3O95232 432 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 RPSAP08865 295 aaKnown RBP9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 SLMAPQ14BN4 828 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 YIPF3Q9GZM5 350 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 TAOK3Q9H2K8 898 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 KIF20BQ96Q89 1820 aa9.25□□□□□ -0.93
CRNKL1-207ENST00000536226 NAA16Q6N069 864 aaPredicted RBP9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 ATG3Q9NT62 314 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 TMOD4Q9NZQ9 345 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 MON2Q7Z3U7 1717 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 DLC1Q96QB1 1528 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 E2F6O75461 281 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 SKILP12757 684 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 GSDMDP57764 484 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 NEXNQ0ZGT2 675 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 CCDC121Q6ZUS5 278 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 ZNF365Q70YC5 407 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 TRIM7Q9C029 511 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 RANBP17Q9H2T7 1088 aaKnown RBP9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 TMEM165Q9HC07 324 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 RGL1Q9NZL6 768 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 RIMS1Q86UR5 1692 aaKnown RBP9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 LRRD1A4D1F6 860 aa9.24□□□□□ -0.93
CRNKL1-207ENST00000536226 ZNF189O75820 626 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms