RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 BCL2L12Q9HB09 334 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 FPGT-TNNI3KV9GXZ4 949 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 NFAT5O94916 1531 aa22.8■■□□□ 1.24
CAPN1-226ENST00000533820 RAPGEF4Q8WZA2 1011 aa22.79■■□□□ 1.24
CAPN1-226ENST00000533820 NPHP3Q7Z494 1330 aa22.79■■□□□ 1.24
CAPN1-226ENST00000533820 CHAF1AQ13111 956 aaPredicted RBP22.79■■□□□ 1.24
CAPN1-226ENST00000533820 DHX37Q8IY37 1157 aaKnown RBP22.79■■□□□ 1.24
CAPN1-226ENST00000533820 GTF3C6Q969F1 213 aa22.78■■□□□ 1.24
CAPN1-226ENST00000533820 NCOA5Q9HCD5 579 aaKnown RBP22.78■■□□□ 1.24
CAPN1-226ENST00000533820 A0A087WZG4 1122 aa22.78■■□□□ 1.24
CAPN1-226ENST00000533820 PTPN12Q05209 780 aaKnown RBP22.78■■□□□ 1.24
CAPN1-226ENST00000533820 DDX17Q92841 729 aaKnown RBP22.78■■□□□ 1.24
CAPN1-226ENST00000533820 CRYBG1Q9Y4K1 1723 aa22.77■■□□□ 1.24
CAPN1-226ENST00000533820 ZNF771Q7L3S4 317 aaPredicted RBP22.77■■□□□ 1.24
CAPN1-226ENST00000533820 SECISBP2LQ93073 1101 aaKnown RBP22.77■■□□□ 1.24
CAPN1-226ENST00000533820 ANKLE2Q86XL3 938 aa22.77■■□□□ 1.24
CAPN1-226ENST00000533820 METTL22Q9BUU2 404 aaPredicted RBP22.77■■□□□ 1.24
CAPN1-226ENST00000533820 CLSTN2Q9H4D0 955 aa22.77■■□□□ 1.24
CAPN1-226ENST00000533820 ELP1O95163 1332 aa22.77■■□□□ 1.24
CAPN1-226ENST00000533820 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 APOBRQ0VD83 1088 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 SCRN1Q12765 414 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 UTYO14607 1347 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 GOLIM4O00461 696 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 HMG20BQ9P0W2 317 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 STOX1Q6ZVD7 989 aa22.76■■□□□ 1.23
CAPN1-226ENST00000533820 DDX19AQ9NUU7 478 aaKnown RBP22.76■■□□□ 1.23
CAPN1-226ENST00000533820 TIMM10P62072 90 aa22.75■■□□□ 1.23
CAPN1-226ENST00000533820 ZNF609O15014 1411 aa22.75■■□□□ 1.23
CAPN1-226ENST00000533820 ATP5JP18859 108 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 RESTQ13127 1097 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 LMBR1LQ6UX01 489 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 SLC52A2Q9HAB3 445 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 ARID5BQ14865 1188 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 CABLES1Q8TDN4 633 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 ZNF592Q92610 1267 aa22.74■■□□□ 1.23
CAPN1-226ENST00000533820 ZNF75DP51815 510 aa22.73■■□□□ 1.23
CAPN1-226ENST00000533820 CLIP2Q9UDT6 1046 aa22.73■■□□□ 1.23
CAPN1-226ENST00000533820 MCMDC2Q4G0Z9 681 aa22.73■■□□□ 1.23
CAPN1-226ENST00000533820 KRT28Q7Z3Y7 464 aa22.73■■□□□ 1.23
CAPN1-226ENST00000533820 KRT32Q14532 448 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 CHRNA2Q15822 529 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 CCDC144BQ3MJ40 725 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 CCDC144CPQ8IYA2 1237 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 SNRKQ9NRH2 765 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 RFX5P48382 616 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-226ENST00000533820 C11orf57Q6ZUT1 292 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-226ENST00000533820 RAB11FIP4Q86YS3 637 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 COPRSQ9NQ92 184 aa22.72■■□□□ 1.23
CAPN1-226ENST00000533820 IRX5P78411 483 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-226ENST00000533820 TPM3P06753 285 aa22.71■■□□□ 1.23
CAPN1-226ENST00000533820 NAA30Q147X3 362 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-226ENST00000533820 ZSCAN25Q6NSZ9 544 aa22.71■■□□□ 1.23
CAPN1-226ENST00000533820 CACTINQ8WUQ7 758 aaKnown RBP22.71■■□□□ 1.23
CAPN1-226ENST00000533820 U3KPZ7 1027 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-226ENST00000533820 CCAR1Q8IX12 1150 aaKnown RBP22.71■■□□□ 1.23
CAPN1-226ENST00000533820 GOLGA6L19H0YKK7 550 aa22.7■■□□□ 1.22
CAPN1-226ENST00000533820 USPL1Q5W0Q7 1092 aa22.7■■□□□ 1.22
CAPN1-226ENST00000533820 ZBTB9Q96C00 473 aa22.7■■□□□ 1.22
CAPN1-226ENST00000533820 ZNF594Q96JF6 807 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-226ENST00000533820 ERBB3P21860 1342 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 PTPDC1A2A3K4 754 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 GTF2F1P35269 517 aaKnown RBP eCLIP22.69■■□□□ 1.224e-13■■■■□ 21.8
CAPN1-226ENST00000533820 OTUD7BQ6GQQ9 843 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 FILIP1Q7Z7B0 1213 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 GPHNQ9NQX3 736 aaPredicted RBP22.69■■□□□ 1.22
CAPN1-226ENST00000533820 LMO7Q8WWI1 1683 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 TTLL5Q6EMB2 1281 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 PDCL2Q8N4E4 241 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 USP28Q96RU2 1077 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 GOLPH3LQ9H4A5 285 aa22.69■■□□□ 1.22
CAPN1-226ENST00000533820 CCDC85AQ96PX6 553 aaPredicted RBP22.68■■□□□ 1.22
CAPN1-226ENST00000533820 PHKG2P15735 406 aa22.68■■□□□ 1.22
CAPN1-226ENST00000533820 TATP17735 454 aaPredicted RBP22.68■■□□□ 1.22
CAPN1-226ENST00000533820 U2AF2P26368 475 aaKnown RBP eCLIP22.68■■□□□ 1.22
CAPN1-226ENST00000533820 ME1P48163 572 aa22.68■■□□□ 1.22
CAPN1-226ENST00000533820 TSGA10IPQ3SY00 556 aa22.68■■□□□ 1.22
CAPN1-226ENST00000533820 TNNT1P13805 278 aa22.68■■□□□ 1.22
CAPN1-226ENST00000533820 TPD52L1Q16890 204 aaPredicted RBP22.68■■□□□ 1.22
CAPN1-226ENST00000533820 CFAP45Q9UL16 551 aa22.68■■□□□ 1.22
CAPN1-226ENST00000533820 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
CAPN1-226ENST00000533820 CTDNEP1O95476 244 aa22.67■■□□□ 1.22
CAPN1-226ENST00000533820 HAND2P61296 217 aa22.67■■□□□ 1.22
CAPN1-226ENST00000533820 HSP90AB3PQ58FF7 597 aa22.67■■□□□ 1.22
CAPN1-226ENST00000533820 PLA2G4DQ86XP0 818 aa22.67■■□□□ 1.22
CAPN1-226ENST00000533820 NSUN7Q8NE18 718 aaKnown RBP22.67■■□□□ 1.22
CAPN1-226ENST00000533820 HAUS7Q99871 368 aa22.67■■□□□ 1.22
CAPN1-226ENST00000533820 ZNF330Q9Y3S2 320 aaPredicted RBP22.67■■□□□ 1.22
CAPN1-226ENST00000533820 SNRPA1P09661 255 aaKnown RBP22.67■■□□□ 1.22
CAPN1-226ENST00000533820 TDRD7Q8NHU6 1098 aaKnown RBP22.67■■□□□ 1.22
CAPN1-226ENST00000533820 BECN2A8MW95 431 aa22.66■■□□□ 1.22
CAPN1-226ENST00000533820 IRX3P78415 501 aaPredicted RBP22.66■■□□□ 1.22
CAPN1-226ENST00000533820 TAF3Q5VWG9 929 aa22.66■■□□□ 1.22
CAPN1-226ENST00000533820 KBTBD3Q8NAB2 608 aa22.66■■□□□ 1.22
CAPN1-226ENST00000533820 ALDH8A1Q9H2A2 487 aaPredicted RBP22.66■■□□□ 1.22
CAPN1-226ENST00000533820 KDM6AO15550 1401 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-226ENST00000533820 DHX32Q7L7V1 743 aaKnown RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms