RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 M0R2N6 131 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 ST8SIA5O15466 376 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 EIF4BP23588 611 aaKnown RBP5.66□□□□□ -1.5
CD44-213ENST00000525209 PMLP29590 882 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 RPIAP49247 311 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 NASPP49321 788 aaPredicted RBP5.66□□□□□ -1.5
CD44-213ENST00000525209 SQSTM1Q13501 440 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 KCTD2Q14681 263 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 TKFCQ3LXA3 575 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 L1TD1Q5T7N2 865 aaKnown RBP5.66□□□□□ -1.5
CD44-213ENST00000525209 RNF20Q5VTR2 975 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 ZNF787Q6DD87 383 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 ERMP1Q7Z2K6 904 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 IFNL3Q8IZI9 196 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 HNRNPLLQ8WVV9 542 aaKnown RBP5.66□□□□□ -1.5
CD44-213ENST00000525209 FAM126AQ9BYI3 521 aaPredicted RBP5.66□□□□□ -1.5
CD44-213ENST00000525209 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 PCDHB9Q9Y5E1 797 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 PCDHGA11Q9Y5H2 935 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 RPGRIP1LQ68CZ1 1315 aa5.66□□□□□ -1.5
CD44-213ENST00000525209 POTECB2RU33 542 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 FOXO3O43524 673 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 CD2BP2O95400 341 aaKnown RBP5.65□□□□□ -1.5
CD44-213ENST00000525209 SCGB1D2O95969 90 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 ATF3P18847 181 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 TRAPPC10P48553 1259 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 MMP16P51512 607 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 MORC3Q14149 939 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 C14orf80Q86SX3 495 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 DRC7Q8IY82 874 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 CHPFQ8IZ52 775 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 MYO1HQ8N1T3 1032 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 CCDC24Q8N4L8 307 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 TSEN2Q8NCE0 465 aaKnown RBP5.65□□□□□ -1.5
CD44-213ENST00000525209 ENOX1Q8TC92 643 aaKnown RBP5.65□□□□□ -1.5
CD44-213ENST00000525209 SECISBP2LQ93073 1101 aaKnown RBP5.65□□□□□ -1.5
CD44-213ENST00000525209 ZNF69Q9UC07 566 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 STRIP2Q9ULQ0 834 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 DOLKQ9UPQ8 538 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 GPSM3Q9Y4H4 160 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 MRVI1Q9Y6F6 885 aa5.65□□□□□ -1.5
CD44-213ENST00000525209 SHTN1A0MZ66 631 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 ESPNB1AK53 854 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 DGAT1O75907 488 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 DXOO77932 396 aaKnown RBP5.64□□□□□ -1.51
CD44-213ENST00000525209 VDRP11473 427 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 IGFBP4P22692 258 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 MCL1Q07820 350 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 CCDC184Q52MB2 194 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 DALRD3Q5D0E6 543 aaKnown RBP5.64□□□□□ -1.51
CD44-213ENST00000525209 ACBD5Q5T8D3 534 aaPredicted RBP5.64□□□□□ -1.51
CD44-213ENST00000525209 ZKSCAN2Q63HK3 967 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 RETREG3Q86VR2 466 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 DDX42Q86XP3 938 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD44-213ENST00000525209 TEX19Q8NA77 164 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 TTC8Q8TAM2 541 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 FBXO41Q8TF61 875 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 E2F7Q96AV8 911 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 CDV3Q9UKY7 258 aaKnown RBP5.64□□□□□ -1.51
CD44-213ENST00000525209 MRPS23Q9Y3D9 190 aaKnown RBP5.64□□□□□ -1.51
CD44-213ENST00000525209 WASHC2CQ9Y4E1 1318 aa5.64□□□□□ -1.51
CD44-213ENST00000525209 CNGA1P29973 690 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 PTK2Q05397 1052 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
CD44-213ENST00000525209 TRIM32Q13049 653 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 TAF1CQ15572 869 aaPredicted RBP5.63□□□□□ -1.51
CD44-213ENST00000525209 GRAMD1BQ3KR37 738 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 OXLD1Q5BKU9 147 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 C16orf46Q6P387 395 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 GAS2L2Q8NHY3 880 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 CSRNP1Q96S65 589 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 CDC5LQ99459 802 aaKnown RBP5.63□□□□□ -1.51
CD44-213ENST00000525209 SPON2Q9BUD6 331 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 SAP130Q9H0E3 1048 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 RSPH9Q9H1X1 276 aaPredicted RBP5.63□□□□□ -1.51
CD44-213ENST00000525209 PPCSQ9HAB8 311 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 COPRSQ9NQ92 184 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 PRKAG3Q9UGI9 489 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 LEMD3Q9Y2U8 911 aa5.63□□□□□ -1.51
CD44-213ENST00000525209 TMEM238LA0A1B0GVL6 79 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 ST13P50502 369 aaKnown RBP5.62□□□□□ -1.51
CD44-213ENST00000525209 SIM2Q14190 667 aaPredicted RBP5.62□□□□□ -1.51
CD44-213ENST00000525209 TCEA2Q15560 299 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 KSR2Q6VAB6 950 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 CYP4X1Q8N118 509 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 OCSTAMPQ9BR26 566 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 AS3MTQ9HBK9 375 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 PTPRHQ9HD43 1115 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.62□□□□□ -1.51
CD44-213ENST00000525209 TOR4AQ9NXH8 423 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 DACH1Q9UI36 760 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 PLAAQ9Y263 795 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 EFR3BQ9Y2G0 817 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 R3HCC1Q9Y3T6 440 aaKnown RBP5.62□□□□□ -1.51
CD44-213ENST00000525209 PPP2R3BQ9Y5P8 575 aa5.62□□□□□ -1.51
CD44-213ENST00000525209 RB1CC1Q8TDY2 1594 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms