RNA–Protein interactions for RNA: ENST00000518504.5

SMN1-210, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 453 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-210ENST00000518504 Q6ZS46 218 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 TREML1Q86YW5 311 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 GALNT11Q8NCW6 608 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 C11orf16Q9NQ32 467 aa7.97□□□□□ -1.13
SMN1-210ENST00000518504 LINC01387J3KSC0 135 aa7.96□□□□□ -1.14
SMN1-210ENST00000518504 EGFRP00533 1210 aa7.96□□□□□ -1.14
SMN1-210ENST00000518504 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.96□□□□□ -1.14
SMN1-210ENST00000518504 CLUAP1Q96AJ1 413 aa7.96□□□□□ -1.14
SMN1-210ENST00000518504 FMNL2Q96PY5 1086 aa7.96□□□□□ -1.14
SMN1-210ENST00000518504 RBSNQ9H1K0 784 aa7.96□□□□□ -1.14
SMN1-210ENST00000518504 KCNMB2Q9Y691 235 aa7.96□□□□□ -1.14
SMN1-210ENST00000518504 WEE1P30291 646 aa7.95□□□□□ -1.14
SMN1-210ENST00000518504 FLIIQ13045 1269 aa7.95□□□□□ -1.14
SMN1-210ENST00000518504 ARMC10Q8N2F6 343 aa7.95□□□□□ -1.14
SMN1-210ENST00000518504 LACRTQ9GZZ8 138 aa7.95□□□□□ -1.14
SMN1-210ENST00000518504 KIAA1324LA8MWY0 1029 aaPredicted RBP7.94□□□□□ -1.14
SMN1-210ENST00000518504 FOXO3O43524 673 aa7.94□□□□□ -1.14
SMN1-210ENST00000518504 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
SMN1-210ENST00000518504 MYO19Q96H55 970 aa7.94□□□□□ -1.14
SMN1-210ENST00000518504 KCNK4Q9NYG8 393 aa7.94□□□□□ -1.14
SMN1-210ENST00000518504 RNF114Q9Y508 228 aa7.94□□□□□ -1.14
SMN1-210ENST00000518504 PPME1Q9Y570 386 aa7.94□□□□□ -1.14
SMN1-210ENST00000518504 FAM196BA6NMK8 535 aa7.93□□□□□ -1.14
SMN1-210ENST00000518504 GSC2O15499 205 aa7.93□□□□□ -1.14
SMN1-210ENST00000518504 DHX15O43143 795 aaKnown RBP7.93□□□□□ -1.14
SMN1-210ENST00000518504 YBX3P16989 372 aaKnown RBP eCLIP7.93□□□□□ -1.14
SMN1-210ENST00000518504 ZDHHC13Q8IUH4 622 aa7.93□□□□□ -1.14
SMN1-210ENST00000518504 MAP4K3Q8IVH8 894 aa7.93□□□□□ -1.14
SMN1-210ENST00000518504 ARXQ96QS3 562 aa7.93□□□□□ -1.14
SMN1-210ENST00000518504 PPP1R12CQ9BZL4 782 aa7.93□□□□□ -1.14
SMN1-210ENST00000518504 SRA1Q9HD15 236 aaKnown RBP7.93□□□□□ -1.14
SMN1-210ENST00000518504 LMOD1P29536 600 aaPredicted RBP7.92□□□□□ -1.14
SMN1-210ENST00000518504 ATP11AP98196 1134 aa7.92□□□□□ -1.14
SMN1-210ENST00000518504 COL13A1Q5TAT6 717 aaPredicted RBP7.92□□□□□ -1.14
SMN1-210ENST00000518504 TRIM42Q8IWZ5 723 aa7.92□□□□□ -1.14
SMN1-210ENST00000518504 UTP4Q969X6 686 aaKnown RBP7.92□□□□□ -1.14
SMN1-210ENST00000518504 CARD10Q9BWT7 1032 aa7.92□□□□□ -1.14
SMN1-210ENST00000518504 VRTNQ9H8Y1 702 aa7.92□□□□□ -1.14
SMN1-210ENST00000518504 HMX2A2RU54 273 aa7.91□□□□□ -1.14
SMN1-210ENST00000518504 NFIAQ12857 509 aa7.91□□□□□ -1.14
SMN1-210ENST00000518504 TRIP4Q15650 581 aaPredicted RBP7.91□□□□□ -1.14
SMN1-210ENST00000518504 COX20Q5RI15 118 aa7.91□□□□□ -1.14
SMN1-210ENST00000518504 ADAMTSL4Q6UY14 1074 aa7.91□□□□□ -1.14
SMN1-210ENST00000518504 C7orf69Q9H7B7 122 aa7.91□□□□□ -1.14
SMN1-210ENST00000518504 CD68P34810 354 aaPredicted RBP7.9□□□□□ -1.14
SMN1-210ENST00000518504 SOX18P35713 384 aa7.9□□□□□ -1.14
SMN1-210ENST00000518504 CEP135Q66GS9 1140 aa7.9□□□□□ -1.14
SMN1-210ENST00000518504 DCAF11Q8TEB1 546 aa7.9□□□□□ -1.14
SMN1-210ENST00000518504 DDX3YO15523 660 aaKnown RBP7.89□□□□□ -1.15
SMN1-210ENST00000518504 HOXD8P13378 290 aaPredicted RBP7.89□□□□□ -1.15
SMN1-210ENST00000518504 SPINK2P20155 84 aa7.89□□□□□ -1.15
SMN1-210ENST00000518504 FKBP5Q13451 457 aaPredicted RBP7.89□□□□□ -1.15
SMN1-210ENST00000518504 CDCA8Q53HL2 280 aa7.89□□□□□ -1.15
SMN1-210ENST00000518504 NLRP13Q86W25 1043 aa7.89□□□□□ -1.15
SMN1-210ENST00000518504 PROSER2Q86WR7 435 aaPredicted RBP7.89□□□□□ -1.15
SMN1-210ENST00000518504 ETFBKMTQ8IXQ9 262 aa7.89□□□□□ -1.15
SMN1-210ENST00000518504 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
SMN1-210ENST00000518504 CEP41Q9BYV8 373 aa7.89□□□□□ -1.15
SMN1-210ENST00000518504 MUC3BQ9H195 1237 aa7.89□□□□□ -1.15
SMN1-210ENST00000518504 KIAA1211Q6ZU35 1233 aa7.88□□□□□ -1.15
SMN1-210ENST00000518504 FNBP4Q8N3X1 1017 aaPredicted RBP7.88□□□□□ -1.15
SMN1-210ENST00000518504 PRIMPOLQ96LW4 560 aa7.88□□□□□ -1.15
SMN1-210ENST00000518504 SAP130Q9H0E3 1048 aa7.88□□□□□ -1.15
SMN1-210ENST00000518504 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.88□□□□□ -1.15
SMN1-210ENST00000518504 PRR19A6NJB7 356 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 UBAP1LF5GYI3 381 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 CDC27P30260 824 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 GRIK1P39086 918 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 DUOXA2Q1HG44 320 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 FAM26DQ5JW98 314 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 RNF43Q68DV7 783 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 UBASH3BQ8TF42 649 aa7.87□□□□□ -1.15
SMN1-210ENST00000518504 FAM46AQ96IP4 442 aaKnown RBP7.87□□□□□ -1.15
SMN1-210ENST00000518504 SH2B1Q9NRF2 756 aaPredicted RBP7.87□□□□□ -1.15
SMN1-210ENST00000518504 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
SMN1-210ENST00000518504 OR13H1Q8NG92 308 aa7.86□□□□□ -1.15
SMN1-210ENST00000518504 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
SMN1-210ENST00000518504 DBNDD2Q9BQY9 259 aa7.86□□□□□ -1.15
SMN1-210ENST00000518504 RASSF4Q9H2L5 321 aa7.86□□□□□ -1.15
SMN1-210ENST00000518504 KCNF1Q9H3M0 494 aa7.86□□□□□ -1.15
SMN1-210ENST00000518504 A6NJR5 290 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 TM4SF5O14894 197 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 FSCN2O14926 492 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 INTS5Q6P9B9 1019 aaKnown RBP7.85□□□□□ -1.15
SMN1-210ENST00000518504 CACTIN-AS1Q8N1I8 211 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 SHKBP1Q8TBC3 707 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 SPACA7Q96KW9 195 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 MYRFLQ96LU7 910 aa7.85□□□□□ -1.15
SMN1-210ENST00000518504 ADAM11O75078 769 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 SMNDC1O75940 238 aaKnown RBP eCLIP7.84□□□□□ -1.15
SMN1-210ENST00000518504 WNT11O96014 354 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 EPHA1P21709 976 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 HYAL2Q12891 473 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 UVSSAQ2YD98 709 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 DTX1Q86Y01 620 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 FOXD4L4Q8WXT5 416 aaPredicted RBP7.84□□□□□ -1.15
SMN1-210ENST00000518504 COL26A1Q96A83 441 aa7.84□□□□□ -1.15
SMN1-210ENST00000518504 PRMT3O60678 531 aa7.83□□□□□ -1.16
SMN1-210ENST00000518504 CYP2E1P05181 493 aaPredicted RBP7.83□□□□□ -1.16
SMN1-210ENST00000518504 BMP3P12645 472 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms