RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 COL13A1Q5TAT6 717 aaPredicted RBP11.75□□□□□ -0.53
PTPN20-215ENST00000505814 BRIP1Q9BX63 1249 aa11.75□□□□□ -0.53
PTPN20-215ENST00000505814 DDX21Q9NR30 783 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTPN20-215ENST00000505814 CHRNA5P30532 468 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 PRELPP51888 382 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 PPP4CP60510 307 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 CALD1Q05682 793 aaKnown RBP11.74□□□□□ -0.53
PTPN20-215ENST00000505814 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
PTPN20-215ENST00000505814 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 ZNF34Q8IZ26 560 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 PDZRN3Q9UPQ7 1066 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 ZNF652Q9Y2D9 606 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 TIAM2Q8IVF5 1701 aa11.74□□□□□ -0.53
PTPN20-215ENST00000505814 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
PTPN20-215ENST00000505814 NTSR2O95665 410 aa11.73□□□□□ -0.53
PTPN20-215ENST00000505814 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
PTPN20-215ENST00000505814 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
PTPN20-215ENST00000505814 SLX4Q8IY92 1834 aa11.73□□□□□ -0.53
PTPN20-215ENST00000505814 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 TNS4Q8IZW8 715 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 NGEFQ8N5V2 710 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 CNBD1Q8NA66 436 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 SETDB2Q96T68 719 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-215ENST00000505814 PIM2Q9P1W9 311 aa11.72□□□□□ -0.53
PTPN20-215ENST00000505814 DICER1Q9UPY3 1922 aaKnown RBP11.71□□□□□ -0.53
PTPN20-215ENST00000505814 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 ANXA1P04083 346 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 SRGNP10124 158 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 MYL6BP14649 208 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 MLLT3P42568 568 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-215ENST00000505814 KCNC4Q03721 635 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 DUSP27Q5VZP5 1158 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 WDR63Q8IWG1 891 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 C8orf58Q8NAV2 365 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
PTPN20-215ENST00000505814 NIP7Q9Y221 180 aaKnown RBP eCLIP11.71□□□□□ -0.53
PTPN20-215ENST00000505814 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
PTPN20-215ENST00000505814 FANCIQ9NVI1 1328 aa11.7□□□□□ -0.54
PTPN20-215ENST00000505814 PDE6BP35913 854 aa11.7□□□□□ -0.54
PTPN20-215ENST00000505814 DALRD3Q5D0E6 543 aaKnown RBP11.7□□□□□ -0.54
PTPN20-215ENST00000505814 STYK1Q6J9G0 422 aa11.7□□□□□ -0.54
PTPN20-215ENST00000505814 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
PTPN20-215ENST00000505814 C7orf43Q8WVR3 580 aa11.7□□□□□ -0.54
PTPN20-215ENST00000505814 DBF4Q9UBU7 674 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-215ENST00000505814 CACNA1FO60840 1977 aa11.7□□□□□ -0.54
PTPN20-215ENST00000505814 LTBP1Q14766 1721 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 COL4A1P02462 1669 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 LTBP3Q9NS15 1303 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 CCER2I3L3R5 266 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 NFKBIEO00221 500 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 C2CD5Q86YS7 1000 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 TSPYL6Q8N831 410 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 TTC13Q8NBP0 860 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 XAGE3Q8WTP9 111 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 ISCA1Q9BUE6 129 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 BCS1LQ9Y276 419 aa11.69□□□□□ -0.54
PTPN20-215ENST00000505814 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
PTPN20-215ENST00000505814 ST5P78524 1137 aa11.68□□□□□ -0.54
PTPN20-215ENST00000505814 TRIM28Q13263 835 aaKnown RBP11.68□□□□□ -0.54
PTPN20-215ENST00000505814 SLC10A5Q5PT55 438 aa11.68□□□□□ -0.54
PTPN20-215ENST00000505814 SUSD4Q5VX71 490 aa11.68□□□□□ -0.54
PTPN20-215ENST00000505814 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
PTPN20-215ENST00000505814 NBPF5PQ86XG9 351 aaPredicted RBP11.68□□□□□ -0.54
PTPN20-215ENST00000505814 TTLL6Q8N841 843 aa11.68□□□□□ -0.54
PTPN20-215ENST00000505814 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
PTPN20-215ENST00000505814 ZC3H4Q9UPT8 1303 aaKnown RBP11.67□□□□□ -0.54
PTPN20-215ENST00000505814 H0YIN7 160 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 HOXA10P31260 410 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-215ENST00000505814 TPTE2Q6XPS3 522 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 NLRP10Q86W26 655 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 PLBD2Q8NHP8 589 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
PTPN20-215ENST00000505814 HYPKQ9NX55 129 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
PTPN20-215ENST00000505814 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
PTPN20-215ENST00000505814 TCIRG1Q13488 830 aa11.66□□□□□ -0.54
PTPN20-215ENST00000505814 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
PTPN20-215ENST00000505814 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
PTPN20-215ENST00000505814 WWC3Q9ULE0 1092 aa11.66□□□□□ -0.54
PTPN20-215ENST00000505814 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
PTPN20-215ENST00000505814 NPR1P16066 1061 aa11.65□□□□□ -0.54
PTPN20-215ENST00000505814 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
PTPN20-215ENST00000505814 PRPF40BQ6NWY9 871 aaKnown RBP11.65□□□□□ -0.54
PTPN20-215ENST00000505814 ZNF526Q8TF50 670 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-215ENST00000505814 NECTIN2Q92692 538 aa11.65□□□□□ -0.54
PTPN20-215ENST00000505814 COL4A5P29400 1685 aa11.65□□□□□ -0.55
PTPN20-215ENST00000505814 CCDC88AQ3V6T2 1871 aa11.64□□□□□ -0.55
PTPN20-215ENST00000505814 WDR90Q96KV7 1748 aa11.64□□□□□ -0.55
PTPN20-215ENST00000505814 GPTP24298 496 aa11.64□□□□□ -0.55
PTPN20-215ENST00000505814 NUTM1Q86Y26 1132 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms