RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 APOBRQ0VD83 1088 aa15.06■□□□□ 0
CLIC4-202ENST00000488683 DNTTIP2Q5QJE6 756 aaKnown RBP15.06■□□□□ 0
CLIC4-202ENST00000488683 RNF20Q5VTR2 975 aa15.06■□□□□ 0
CLIC4-202ENST00000488683 UBE2Q2Q8WVN8 375 aa15.06■□□□□ 0
CLIC4-202ENST00000488683 TOM1L2Q6ZVM7 507 aa15.05■□□□□ 0
CLIC4-202ENST00000488683 PLBD2Q8NHP8 589 aa15.05■□□□□ 0
CLIC4-202ENST00000488683 FUCA2Q9BTY2 467 aa15.05■□□□□ 0
CLIC4-202ENST00000488683 DACT1Q9NYF0 836 aa15.05■□□□□ 0
CLIC4-202ENST00000488683 UQCRHLA0A096LP55 91 aa15.05■□□□□ -0
CLIC4-202ENST00000488683 UQCRHP07919 91 aa15.05■□□□□ -0
CLIC4-202ENST00000488683 HAND2P61296 217 aa15.05■□□□□ -0
CLIC4-202ENST00000488683 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
CLIC4-202ENST00000488683 ATG9AQ7Z3C6 839 aa15.05■□□□□ -0
CLIC4-202ENST00000488683 NEK1Q96PY6 1258 aa15.05■□□□□ -0
CLIC4-202ENST00000488683 SPATA31A3Q5VYP0 1347 aa15.04■□□□□ -0
CLIC4-202ENST00000488683 NR1I2O75469 434 aa15.04■□□□□ -0
CLIC4-202ENST00000488683 FKBP4Q02790 459 aaKnown RBP eCLIP15.04■□□□□ -0
CLIC4-202ENST00000488683 SCRN1Q12765 414 aa15.04■□□□□ -0
CLIC4-202ENST00000488683 TSGA10IPQ3SY00 556 aa15.04■□□□□ -0
CLIC4-202ENST00000488683 TJP1Q07157 1748 aa15.04■□□□□ -0
CLIC4-202ENST00000488683 ADORA1P30542 326 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
CLIC4-202ENST00000488683 SPATA32Q96LK8 384 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 HAUS7Q99871 368 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 LAMA4Q16363 1823 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 NUP188Q5SRE5 1749 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 OTUD7BQ6GQQ9 843 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 PGBD1Q96JS3 809 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 GJB4Q9NTQ9 266 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 HMG20BQ9P0W2 317 aa15.03■□□□□ -0
CLIC4-202ENST00000488683 PARP4Q9UKK3 1724 aaKnown RBP15.03■□□□□ -0
CLIC4-202ENST00000488683 KRT85P78386 507 aa15.02■□□□□ -0
CLIC4-202ENST00000488683 H7C1W4 665 aa15.02□□□□□ -0.01
CLIC4-202ENST00000488683 MCMDC2Q4G0Z9 681 aa15.02□□□□□ -0.01
CLIC4-202ENST00000488683 FAM89AQ96GI7 184 aa15.02□□□□□ -0.01
CLIC4-202ENST00000488683 ALDH8A1Q9H2A2 487 aaPredicted RBP15.02□□□□□ -0.01
CLIC4-202ENST00000488683 ANKRD1Q15327 319 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 FAM184AQ8NB25 1140 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 PRDM11Q9NQV5 511 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 DENND2AQ9ULE3 1009 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 PYCARDQ9ULZ3 195 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 DCCP43146 1447 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 M0R2C6 588 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 SCARF1Q14162 830 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 BICD2Q8TD16 824 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 LEO1Q8WVC0 666 aaPredicted RBP15.01□□□□□ -0.01
CLIC4-202ENST00000488683 PAG1Q9NWQ8 432 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 CPDO75976 1380 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 UBR2Q8IWV8 1755 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 GOLGA6L4A6NEF3 574 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 GTF3C6Q969F1 213 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 KCNF1Q9H3M0 494 aa15.01□□□□□ -0.01
CLIC4-202ENST00000488683 H3BQV1 296 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 GPTP24298 496 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 UVSSAQ2YD98 709 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 ANO6Q4KMQ2 910 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 IFFO2Q5TF58 517 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 CADPS2Q86UW7 1296 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 MRVI1Q9Y6F6 885 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 KCPQ6ZWJ8 1503 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 A0A1B0GUL7 405 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 LETM1O95202 739 aaPredicted RBP15□□□□□ -0.01
CLIC4-202ENST00000488683 CTDNEP1O95476 244 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 KIAA2012Q0VF49 1180 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 KBTBD3Q8NAB2 608 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 NUP62CLQ9H1M0 184 aa15□□□□□ -0.01
CLIC4-202ENST00000488683 CSPP1Q1MSJ5 1256 aa14.99□□□□□ -0.01
CLIC4-202ENST00000488683 TNMDQ9H2S6 317 aa14.99□□□□□ -0.01
CLIC4-202ENST00000488683 TYRO3Q06418 890 aa14.99□□□□□ -0.01
CLIC4-202ENST00000488683 DNAJC25Q9H1X3 360 aa14.99□□□□□ -0.01
CLIC4-202ENST00000488683 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
CLIC4-202ENST00000488683 RFX7Q2KHR2 1363 aa14.99□□□□□ -0.01
CLIC4-202ENST00000488683 IFIT1P09914 478 aaKnown RBP14.98□□□□□ -0.01
CLIC4-202ENST00000488683 PDCP20941 246 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 MCM5P33992 734 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
CLIC4-202ENST00000488683 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
CLIC4-202ENST00000488683 XIRP1Q702N8 1843 aaKnown RBP14.98□□□□□ -0.01
CLIC4-202ENST00000488683 A0A0G2JS52 829 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 TPM2P07951 284 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 HSPD1P10809 573 aaKnown RBP14.98□□□□□ -0.01
CLIC4-202ENST00000488683 LRMPQ12912 555 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 KRT32Q14532 448 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 OSBP2Q969R2 916 aa14.98□□□□□ -0.01
CLIC4-202ENST00000488683 GOLGB1Q14789 3259 aaKnown RBP14.98□□□□□ -0.01
CLIC4-202ENST00000488683 MAST3O60307 1309 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 WDR17Q8IZU2 1322 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 PLEKHG2Q9H7P9 1386 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 MAP3K11Q16584 847 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 WASHC4Q2M389 1173 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 ASAP1Q9ULH1 1129 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 SHANK3Q9BYB0 1731 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 SH3TC1Q8TE82 1336 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 PCDH11XQ9BZA7 1347 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 PCDH11YQ9BZA8 1340 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 E7EWF7 191 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 SNAP23O00161 211 aa14.97□□□□□ -0.01
CLIC4-202ENST00000488683 PTGS1P23219 599 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms