RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 NDUFB9Q9Y6M9 179 aa5.65□□□□□ -1.5
CALD1-218ENST00000478075 GAS2O43903 313 aaKnown RBP5.64□□□□□ -1.51
CALD1-218ENST00000478075 GHRHP01286 108 aa5.64□□□□□ -1.51
CALD1-218ENST00000478075 INHBBP09529 407 aa5.64□□□□□ -1.51
CALD1-218ENST00000478075 ZNF280CQ8ND82 737 aa5.64□□□□□ -1.51
CALD1-218ENST00000478075 RELTQ969Z4 430 aa5.64□□□□□ -1.51
CALD1-218ENST00000478075 PHACTR1Q9C0D0 580 aa5.64□□□□□ -1.51
CALD1-218ENST00000478075 ZBTB42B2RXF5 422 aa5.63□□□□□ -1.51
CALD1-218ENST00000478075 ECM1Q16610 540 aa5.63□□□□□ -1.51
CALD1-218ENST00000478075 KLHL23Q8NBE8 558 aa5.63□□□□□ -1.51
CALD1-218ENST00000478075 MAP4P27816 1152 aaKnown RBP5.62□□□□□ -1.51
CALD1-218ENST00000478075 KIAA1211Q6ZU35 1233 aa5.62□□□□□ -1.51
CALD1-218ENST00000478075 WISP1O95388 367 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 RARAP10276 462 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 MLLT1Q03111 559 aaPredicted RBP5.61□□□□□ -1.51
CALD1-218ENST00000478075 FAM117BQ6P1L5 589 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 FDX2Q6P4F2 183 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 POTEAQ6S8J7 498 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 GLIS3Q8NEA6 775 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 RNF208Q9H0X6 261 aa5.61□□□□□ -1.51
CALD1-218ENST00000478075 EPHA4P54764 986 aa5.6□□□□□ -1.51
CALD1-218ENST00000478075 PAOXQ6QHF9 649 aa5.6□□□□□ -1.51
CALD1-218ENST00000478075 RC3H2Q9HBD1 1191 aaKnown RBP5.6□□□□□ -1.51
CALD1-218ENST00000478075 CYP27A1Q02318 531 aa5.59□□□□□ -1.51
CALD1-218ENST00000478075 PLPP7Q8NBV4 271 aa5.59□□□□□ -1.51
CALD1-218ENST00000478075 MISP3Q96FF7 219 aa5.59□□□□□ -1.51
CALD1-218ENST00000478075 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
CALD1-218ENST00000478075 ZNF358Q9NW07 568 aa5.59□□□□□ -1.51
CALD1-218ENST00000478075 HCN4Q9Y3Q4 1203 aa5.59□□□□□ -1.51
CALD1-218ENST00000478075 RXRBP28702 533 aa5.58□□□□□ -1.52
CALD1-218ENST00000478075 PREPP48147 710 aa5.58□□□□□ -1.52
CALD1-218ENST00000478075 DUSP27Q5VZP5 1158 aa5.58□□□□□ -1.52
CALD1-218ENST00000478075 GALNT11Q8NCW6 608 aa5.58□□□□□ -1.52
CALD1-218ENST00000478075 LOC102724428A0A0B4J2F2 783 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 TGFBR3LH3BV60 316 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 SIK1P57059 783 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 PSME1Q06323 249 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 SH3PXD2AQ5TCZ1 1133 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 HFE2Q6ZVN8 426 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 TLR7Q9NYK1 1049 aaKnown RBP5.57□□□□□ -1.52
CALD1-218ENST00000478075 PCDHGA11Q9Y5H2 935 aa5.57□□□□□ -1.52
CALD1-218ENST00000478075 NFIBO00712 420 aa5.56□□□□□ -1.52
CALD1-218ENST00000478075 BCL7CQ8WUZ0 217 aaPredicted RBP5.56□□□□□ -1.52
CALD1-218ENST00000478075 ZFATQ9P243 1243 aa5.56□□□□□ -1.52
CALD1-218ENST00000478075 FAM95CA0A1B0GW59 222 aa5.55□□□□□ -1.52
CALD1-218ENST00000478075 FAM177BA6PVY3 158 aa5.55□□□□□ -1.52
CALD1-218ENST00000478075 LZTS3O60299 673 aaPredicted RBP5.55□□□□□ -1.52
CALD1-218ENST00000478075 PSAPP07602 524 aa5.55□□□□□ -1.52
CALD1-218ENST00000478075 YIPF2Q9BWQ6 316 aa5.55□□□□□ -1.52
CALD1-218ENST00000478075 LINC01387J3KSC0 135 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 SOX18P35713 384 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 MLANAQ16655 118 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 EML3Q32P44 896 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 TBCELQ5QJ74 424 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 KRT25Q7Z3Z0 450 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
CALD1-218ENST00000478075 NOD1Q9Y239 953 aa5.54□□□□□ -1.52
CALD1-218ENST00000478075 HOXD8P13378 290 aaPredicted RBP5.53□□□□□ -1.52
CALD1-218ENST00000478075 SYN1P17600 705 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 HOXA5P20719 270 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 FUT4P22083 530 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 TARSP26639 723 aaKnown RBP5.53□□□□□ -1.52
CALD1-218ENST00000478075 ZAR1Q86SH2 424 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 ZSWIM9Q86XI8 627 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 ALDH16A1Q8IZ83 802 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 TNS4Q8IZW8 715 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 IFT43Q96FT9 208 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 TBC1D32Q96NH3 1257 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 KCNK4Q9NYG8 393 aa5.53□□□□□ -1.52
CALD1-218ENST00000478075 ZC3H7BQ9UGR2 993 aaKnown RBP5.53□□□□□ -1.52
CALD1-218ENST00000478075 FSCN2O14926 492 aa5.52□□□□□ -1.53
CALD1-218ENST00000478075 GPR37L1O60883 481 aa5.52□□□□□ -1.53
CALD1-218ENST00000478075 NFKBIBQ15653 356 aa5.52□□□□□ -1.53
CALD1-218ENST00000478075 CIAPIN1Q6FI81 312 aa5.52□□□□□ -1.53
CALD1-218ENST00000478075 SYDE1Q6ZW31 735 aaPredicted RBP5.52□□□□□ -1.53
CALD1-218ENST00000478075 SUV39H1O43463 412 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 FOXD2O60548 495 aaPredicted RBP5.51□□□□□ -1.53
CALD1-218ENST00000478075 CDC27P30260 824 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 GTF2IP78347 998 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 STAG2Q8N3U4 1231 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 WNT8BQ93098 351 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 RUSC1Q9BVN2 902 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 SEC31BQ9NQW1 1179 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 TRIM33Q9UPN9 1127 aa5.51□□□□□ -1.53
CALD1-218ENST00000478075 MEGF11A6BM72 1044 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 SASH3O75995 380 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 ARSDP51689 593 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 KCNMB1Q16558 191 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 SGO2Q562F6 1265 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 ERICH6BQ5W0A0 696 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 BANK1Q8NDB2 785 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 PI4K2BQ8TCG2 481 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 PRM3Q9NNZ6 103 aa5.5□□□□□ -1.53
CALD1-218ENST00000478075 J3QW42 95 aa5.49□□□□□ -1.53
CALD1-218ENST00000478075 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
CALD1-218ENST00000478075 RNASE1P07998 156 aaKnown RBP5.49□□□□□ -1.53
CALD1-218ENST00000478075 FLAD1Q8NFF5 587 aa5.49□□□□□ -1.53
CALD1-218ENST00000478075 FOXD4L4Q8WXT5 416 aaPredicted RBP5.49□□□□□ -1.53
CALD1-218ENST00000478075 LRRC4CQ9HCJ2 640 aa5.49□□□□□ -1.53
CALD1-218ENST00000478075 INPP5BP32019 993 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms