RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 FMNL2Q96PY5 1086 aa14.05□□□□□ -0.16
LIMK1-202ENST00000418310 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
LIMK1-202ENST00000418310 KDM3BQ7LBC6 1761 aa14.04□□□□□ -0.16
LIMK1-202ENST00000418310 ATP5JP18859 108 aa14.04□□□□□ -0.16
LIMK1-202ENST00000418310 RFX5P48382 616 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-202ENST00000418310 MCMDC2Q4G0Z9 681 aa14.04□□□□□ -0.16
LIMK1-202ENST00000418310 C16orf45Q96MC5 204 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-202ENST00000418310 SCAND2PQ9GZW5 306 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-202ENST00000418310 HEG1Q9ULI3 1381 aa14.04□□□□□ -0.16
LIMK1-202ENST00000418310 ZNF165P49910 485 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 COPRSQ9NQ92 184 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 UTYO14607 1347 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 WASHC4Q2M389 1173 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 DYNC1I1O14576 645 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 ZNF592Q92610 1267 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 GJB4Q9NTQ9 266 aa14.03□□□□□ -0.16
LIMK1-202ENST00000418310 ATF3P18847 181 aa14.02□□□□□ -0.16
LIMK1-202ENST00000418310 PAG1Q9NWQ8 432 aa14.02□□□□□ -0.16
LIMK1-202ENST00000418310 HMG20BQ9P0W2 317 aa14.02□□□□□ -0.16
LIMK1-202ENST00000418310 MEGF6O75095 1541 aa14.02□□□□□ -0.17
LIMK1-202ENST00000418310 PTPDC1A2A3K4 754 aa14.02□□□□□ -0.17
LIMK1-202ENST00000418310 PI16Q6UXB8 463 aa14.02□□□□□ -0.17
LIMK1-202ENST00000418310 U3KPZ7 1027 aaPredicted RBP14.02□□□□□ -0.17
LIMK1-202ENST00000418310 NBPF26B4DH59 902 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
LIMK1-202ENST00000418310 ME1P48163 572 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 ARID5BQ14865 1188 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 NBPF10Q6P3W6 841 aaKnown RBP14.01□□□□□ -0.17
LIMK1-202ENST00000418310 NBPF15Q8N660 670 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 GOLGA6L6A8MZA4 724 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 RESTQ13127 1097 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 KRT32Q14532 448 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 MYRIPQ8NFW9 859 aa14.01□□□□□ -0.17
LIMK1-202ENST00000418310 A0A0G2JS52 829 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 POLR3DP05423 398 aaPredicted RBP14□□□□□ -0.17
LIMK1-202ENST00000418310 FILIP1Q7Z7B0 1213 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 KBTBD3Q8NAB2 608 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 USP28Q96RU2 1077 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 HAUS7Q99871 368 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 NCAPD2Q15021 1401 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 TERF1P54274 439 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 C11orf57Q6ZUT1 292 aaPredicted RBP14□□□□□ -0.17
LIMK1-202ENST00000418310 CCAR1Q8IX12 1150 aaKnown RBP14□□□□□ -0.17
LIMK1-202ENST00000418310 KIAA1524Q8TCG1 905 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 STRN4Q9NRL3 753 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 RIOK3O14730 519 aaKnown RBP14□□□□□ -0.17
LIMK1-202ENST00000418310 CLSTN2Q9H4D0 955 aa14□□□□□ -0.17
LIMK1-202ENST00000418310 A0A1B0GUL7 405 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 ISM2Q6H9L7 571 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 TOM1L2Q6ZVM7 507 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 GOLGA6L19H0YKK7 550 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 ADORA1P30542 326 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 NSUN7Q8NE18 718 aaKnown RBP13.99□□□□□ -0.17
LIMK1-202ENST00000418310 DDX19AQ9NUU7 478 aaKnown RBP13.99□□□□□ -0.17
LIMK1-202ENST00000418310 CLIP2Q9UDT6 1046 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 CBX1P83916 185 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 CHAF1AQ13111 956 aaPredicted RBP13.99□□□□□ -0.17
LIMK1-202ENST00000418310 TAF7LQ5H9L4 462 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 SYNE4Q8N205 404 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 GOLPH3LQ9H4A5 285 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 KIF3AQ9Y496 699 aa13.99□□□□□ -0.17
LIMK1-202ENST00000418310 N4BP2Q86UW6 1770 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-202ENST00000418310 BECN2A8MW95 431 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 E7EWF7 191 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 M0R2C6 588 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 CTDNEP1O95476 244 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 HSPD1P10809 573 aaKnown RBP13.98□□□□□ -0.17
LIMK1-202ENST00000418310 RXRAP19793 462 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 DHX32Q7L7V1 743 aaKnown RBP13.98□□□□□ -0.17
LIMK1-202ENST00000418310 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 RGPD5Q99666 1765 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 BIN1O00499 593 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 CCDC144BQ3MJ40 725 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 ATG9AQ7Z3C6 839 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 CCDC144CPQ8IYA2 1237 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 STK11IPQ8N1F8 1099 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
LIMK1-202ENST00000418310 CWC25Q9NXE8 425 aaPredicted RBP13.98□□□□□ -0.17
LIMK1-202ENST00000418310 GPTP24298 496 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 FOXO4P98177 505 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 MAST3O60307 1309 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 KAT6BQ8WYB5 2073 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 A0A1B0GVL5 298 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 USPL1Q5W0Q7 1092 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 CCDC73Q6ZRK6 1079 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 FSIP1Q8NA03 581 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 C19orf44Q9H6X5 657 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 ELP1O95163 1332 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 ZNF75DP51815 510 aa13.97□□□□□ -0.17
LIMK1-202ENST00000418310 NAA30Q147X3 362 aaPredicted RBP13.97□□□□□ -0.17
LIMK1-202ENST00000418310 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.17
LIMK1-202ENST00000418310 OSBP2Q969R2 916 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms