RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 SNRKQ9NRH2 765 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.12□□□□□ -0.158e-48■□□□□ 10.7
RBM39-206ENST00000403542 V9GYY5 206 aaPredicted RBP14.12□□□□□ -0.15
RBM39-206ENST00000403542 LTN1O94822 1766 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 HAND2P61296 217 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 CACTINQ8WUQ7 758 aaKnown RBP14.12□□□□□ -0.15
RBM39-206ENST00000403542 HDAC5Q9UQL6 1122 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 ZNF75DP51815 510 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 GJB4Q9NTQ9 266 aa14.12□□□□□ -0.15
RBM39-206ENST00000403542 TRMT1Q9NXH9 659 aaKnown RBP14.12□□□□□ -0.15
RBM39-206ENST00000403542 ZNF609O15014 1411 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 RESTQ13127 1097 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 TPD52L1Q16890 204 aaPredicted RBP14.11□□□□□ -0.15
RBM39-206ENST00000403542 ZSCAN25Q6NSZ9 544 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 CCAR1Q8IX12 1150 aaKnown RBP14.11□□□□□ -0.15
RBM39-206ENST00000403542 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 PDCL2Q8N4E4 241 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 METTL22Q9BUU2 404 aaPredicted RBP14.11□□□□□ -0.15
RBM39-206ENST00000403542 ANKARQ7Z5J8 1434 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 ME1P48163 572 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 FMNL2Q96PY5 1086 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 GOLPH3LQ9H4A5 285 aa14.11□□□□□ -0.15
RBM39-206ENST00000403542 DDX19AQ9NUU7 478 aaKnown RBP14.11□□□□□ -0.15
RBM39-206ENST00000403542 USP27XA6NNY8 438 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 GOLGA6L19H0YKK7 550 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 NPHP1O15259 732 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 TNNT1P13805 278 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 USP28Q96RU2 1077 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 ELP1O95163 1332 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 MCMDC2Q4G0Z9 681 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 ISM2Q6H9L7 571 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 MTERF4Q7Z6M4 381 aaKnown RBP14.1□□□□□ -0.15
RBM39-206ENST00000403542 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
RBM39-206ENST00000403542 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
RBM39-206ENST00000403542 POLR3DP05423 398 aaPredicted RBP14.09□□□□□ -0.15
RBM39-206ENST00000403542 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
RBM39-206ENST00000403542 KRT28Q7Z3Y7 464 aa14.09□□□□□ -0.15
RBM39-206ENST00000403542 BECN2A8MW95 431 aa14.09□□□□□ -0.15
RBM39-206ENST00000403542 ATP5JP18859 108 aa14.09□□□□□ -0.15
RBM39-206ENST00000403542 ANKLE2Q86XL3 938 aa14.09□□□□□ -0.15
RBM39-206ENST00000403542 HMG20BQ9P0W2 317 aa14.09□□□□□ -0.15
RBM39-206ENST00000403542 BIN1O00499 593 aa14.08□□□□□ -0.15
RBM39-206ENST00000403542 CTDNEP1O95476 244 aa14.08□□□□□ -0.15
RBM39-206ENST00000403542 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.15
RBM39-206ENST00000403542 ZBTB3Q9H5J0 574 aa14.08□□□□□ -0.15
RBM39-206ENST00000403542 LRRC24Q50LG9 513 aa14.08□□□□□ -0.16
RBM39-206ENST00000403542 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
RBM39-206ENST00000403542 A0A1B0GVL5 298 aa14.08□□□□□ -0.16
RBM39-206ENST00000403542 NSUN7Q8NE18 718 aaKnown RBP14.08□□□□□ -0.16
RBM39-206ENST00000403542 PRDM4Q9UKN5 801 aa14.08□□□□□ -0.16
RBM39-206ENST00000403542 NFAT5O94916 1531 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 UTYO14607 1347 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 KRT32Q14532 448 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 GTF2F1P35269 517 aaKnown RBP eCLIP14.07□□□□□ -0.16
RBM39-206ENST00000403542 TTLL7Q6ZT98 887 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 FSIP1Q8NA03 581 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 PUS3Q9BZE2 481 aaKnown RBP14.07□□□□□ -0.16
RBM39-206ENST00000403542 COPRSQ9NQ92 184 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
RBM39-206ENST00000403542 ERBB3P21860 1342 aa14.07□□□□□ -0.16
RBM39-206ENST00000403542 HEG1Q9ULI3 1381 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 SLIT1O75093 1534 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 PTPN21Q16825 1174 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 PAG1Q9NWQ8 432 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 CFAP45Q9UL16 551 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 KINO60870 393 aaKnown RBP14.06□□□□□ -0.16
RBM39-206ENST00000403542 PHKG2P15735 406 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 USPL1Q5W0Q7 1092 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 CCDC73Q6ZRK6 1079 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 AOPEPQ8N6M6 819 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 SDF4Q9BRK5 362 aa14.06□□□□□ -0.16
RBM39-206ENST00000403542 MED1Q15648 1581 aaPredicted RBP14.06□□□□□ -0.16
RBM39-206ENST00000403542 TATP17735 454 aaPredicted RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 TRHP20396 242 aaPredicted RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 WASHC4Q2M389 1173 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 DHX32Q7L7V1 743 aaKnown RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 TDRD7Q8NHU6 1098 aaKnown RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 HAUS7Q99871 368 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 KIF13AQ9H1H9 1805 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 A1BGP04217 495 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 TPM3P06753 285 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 SNRPA1P09661 255 aaKnown RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 ADD1P35611 737 aaKnown RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 PI16Q6UXB8 463 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 E7EWF7 191 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 CYP27B1O15528 508 aa14.05□□□□□ -0.16
RBM39-206ENST00000403542 NCBP1Q09161 790 aaKnown RBP14.05□□□□□ -0.16
RBM39-206ENST00000403542 HSPD1P10809 573 aaKnown RBP14.04□□□□□ -0.16
RBM39-206ENST00000403542 SKILP12757 684 aa14.04□□□□□ -0.16
RBM39-206ENST00000403542 RXRAP19793 462 aa14.04□□□□□ -0.16
RBM39-206ENST00000403542 CABP4P57796 275 aa14.04□□□□□ -0.16
RBM39-206ENST00000403542 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
RBM39-206ENST00000403542 IQCB1Q15051 598 aa14.04□□□□□ -0.16
RBM39-206ENST00000403542 SF3A1Q15459 793 aaKnown RBP14.04□□□□□ -0.16
RBM39-206ENST00000403542 STK11IPQ8N1F8 1099 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms